Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RNU6-948P-201ENST00000516374 107 ntBASIC2.46□□□□□ -2.02
RHOP08100 RNU6-965P-201ENST00000516721 96 ntBASIC2.46□□□□□ -2.02
RHOP08100 RNA5SP490-201ENST00000517141 136 ntBASIC2.46□□□□□ -2.02
RHOP08100 MIR4524B-201ENST00000581569 115 ntBASIC2.46□□□□□ -2.02
RHOP08100 AL365265.1-201ENST00000621045 234 ntBASIC2.46□□□□□ -2.02
RHOP08100 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.46□□□□□ -2.02
RHOP08100 Y_RNA.310-201ENST00000365063 113 ntBASIC2.45□□□□□ -2.02
RHOP08100 SNORA72.4-201ENST00000384174 132 ntBASIC2.45□□□□□ -2.02
RHOP08100 RNU6-1072P-201ENST00000384703 107 ntBASIC2.45□□□□□ -2.02
RHOP08100 RNU6-443P-201ENST00000384780 107 ntBASIC2.45□□□□□ -2.02
RHOP08100 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
RHOP08100 AL355796.1-201ENST00000406706 323 ntBASIC2.45□□□□□ -2.02
RHOP08100 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.45□□□□□ -2.02
RHOP08100 RPS12P2-201ENST00000439728 269 ntBASIC2.45□□□□□ -2.02
RHOP08100 SUMO1P3-201ENST00000439961 304 ntBASIC2.45□□□□□ -2.02
RHOP08100 CKS1BP2-201ENST00000497342 240 ntBASIC2.45□□□□□ -2.02
RHOP08100 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.45□□□□□ -2.02
RHOP08100 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.45□□□□□ -2.02
RHOP08100 SNORA31.15-201ENST00000516771 132 ntBASIC2.45□□□□□ -2.02
RHOP08100 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.45□□□□□ -2.02
RHOP08100 PRELID2P1-201ENST00000552837 301 ntBASIC2.45□□□□□ -2.02
RHOP08100 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.45□□□□□ -2.02
RHOP08100 MIR3670-2-201ENST00000582974 65 ntBASIC2.45□□□□□ -2.02
RHOP08100 MIR3670-1-201ENST00000584160 65 ntBASIC2.45□□□□□ -2.02
RHOP08100 MIR3670-3-201ENST00000584855 65 ntBASIC2.45□□□□□ -2.02
RHOP08100 AC025754.2-201ENST00000606491 432 ntBASIC2.45□□□□□ -2.02
RHOP08100 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.45□□□□□ -2.02
RHOP08100 MIR3670-4-201ENST00000612260 65 ntBASIC2.45□□□□□ -2.02
RHOP08100 AC006435.5-201ENST00000624486 112 ntBASIC2.45□□□□□ -2.02
RHOP08100 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
RHOP08100 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
RHOP08100 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RHOP08100 SNORA27.1-201ENST00000362604 124 ntBASIC2.44□□□□□ -2.02
RHOP08100 RNU6-271P-201ENST00000363858 105 ntBASIC2.44□□□□□ -2.02
RHOP08100 Y_RNA.332-201ENST00000365271 113 ntBASIC2.44□□□□□ -2.02
RHOP08100 SNORA20B-201ENST00000384220 132 ntBASIC2.44□□□□□ -2.02
RHOP08100 Y_RNA.464-201ENST00000384282 110 ntBASIC2.44□□□□□ -2.02
RHOP08100 SNORA26.5-201ENST00000391215 123 ntBASIC2.44□□□□□ -2.02
RHOP08100 RNU6-57P-201ENST00000411348 103 ntBASIC2.44□□□□□ -2.02
RHOP08100 AC008134.1-201ENST00000420943 193 ntBASIC2.44□□□□□ -2.02
RHOP08100 MTCO1P44-201ENST00000441935 243 ntBASIC2.44□□□□□ -2.02
RHOP08100 AL357134.1-201ENST00000445848 426 ntBASIC2.44□□□□□ -2.02
RHOP08100 HSPE1P13-201ENST00000451143 297 ntBASIC2.44□□□□□ -2.02
RHOP08100 AL137159.1-201ENST00000452808 512 ntBASIC2.44□□□□□ -2.02
RHOP08100 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.44□□□□□ -2.02
RHOP08100 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.44□□□□□ -2.02
RHOP08100 AC010598.1-201ENST00000510378 103 ntBASIC2.44□□□□□ -2.02
RHOP08100 RNU6-1212P-201ENST00000517023 104 ntBASIC2.44□□□□□ -2.02
RHOP08100 AC025647.1-201ENST00000517879 253 ntBASIC2.44□□□□□ -2.02
RHOP08100 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.44□□□□□ -2.02
RHOP08100 MIR6873-201ENST00000622788 63 ntBASIC2.44□□□□□ -2.02
RHOP08100 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.44□□□□□ -2.02
RHOP08100 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RHOP08100 Y_RNA.233-201ENST00000364407 101 ntBASIC2.43□□□□□ -2.02
RHOP08100 Y_RNA.287-201ENST00000364853 94 ntBASIC2.43□□□□□ -2.02
RHOP08100 RNU6-438P-201ENST00000365561 103 ntBASIC2.43□□□□□ -2.02
RHOP08100 SNORA40.19-201ENST00000390846 128 ntBASIC2.43□□□□□ -2.02
RHOP08100 AL355497.1-201ENST00000406262 551 ntBASIC2.43□□□□□ -2.02
RHOP08100 RNU6-855P-201ENST00000410395 104 ntBASIC2.43□□□□□ -2.02
RHOP08100 COX6CP10-201ENST00000416832 224 ntBASIC2.43□□□□□ -2.02
RHOP08100 SUMO1P4-201ENST00000429430 302 ntBASIC2.43□□□□□ -2.02
RHOP08100 AC016717.1-201ENST00000448918 286 ntBASIC2.43□□□□□ -2.02
RHOP08100 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.43□□□□□ -2.02
RHOP08100 SNORD65B-201ENST00000459126 73 ntBASIC2.43□□□□□ -2.02
RHOP08100 AC010531.2-201ENST00000465012 153 ntBASIC2.43□□□□□ -2.02
RHOP08100 RPS26P55-201ENST00000471178 356 ntBASIC2.43□□□□□ -2.02
RHOP08100 AC093259.1-201ENST00000509755 300 ntBASIC2.43□□□□□ -2.02
RHOP08100 AC100767.1-201ENST00000528178 123 ntBASIC2.43□□□□□ -2.02
RHOP08100 MIR4446-201ENST00000578505 67 ntBASIC2.43□□□□□ -2.02
RHOP08100 MIR4308-201ENST00000580634 81 ntBASIC2.43□□□□□ -2.02
RHOP08100 MIR5007-201ENST00000583098 95 ntBASIC2.43□□□□□ -2.02
RHOP08100 MIR4769-201ENST00000584126 77 ntBASIC2.43□□□□□ -2.02
RHOP08100 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.43□□□□□ -2.02
RHOP08100 AL365434.2-201ENST00000607979 234 ntBASIC2.43□□□□□ -2.02
RHOP08100 AC067747.1-201ENST00000608026 250 ntBASIC2.43□□□□□ -2.02
RHOP08100 AC013791.1-201ENST00000616619 62 ntBASIC2.43□□□□□ -2.02
RHOP08100 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.43□□□□□ -2.02
RHOP08100 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RHOP08100 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.42□□□□□ -2.02
RHOP08100 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RHOP08100 Y_RNA.124-201ENST00000363339 93 ntBASIC2.42□□□□□ -2.02
RHOP08100 Y_RNA.341-201ENST00000365341 102 ntBASIC2.42□□□□□ -2.02
RHOP08100 MIR561-201ENST00000385216 97 ntBASIC2.42□□□□□ -2.02
RHOP08100 MIR1289-2-201ENST00000408360 111 ntBASIC2.42□□□□□ -2.02
RHOP08100 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.42□□□□□ -2.02
RHOP08100 AC016909.1-201ENST00000415916 166 ntBASIC2.42□□□□□ -2.02
RHOP08100 AC123900.1-201ENST00000420390 96 ntBASIC2.42□□□□□ -2.02
RHOP08100 U8.19-201ENST00000459095 133 ntBASIC2.42□□□□□ -2.02
RHOP08100 AC018868.1-201ENST00000491307 315 ntBASIC2.42□□□□□ -2.02
RHOP08100 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.42□□□□□ -2.02
RHOP08100 AL355297.2-201ENST00000604792 129 ntBASIC2.42□□□□□ -2.02
RHOP08100 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.42□□□□□ -2.02
RHOP08100 U6.106-201ENST00000636360 105 ntBASIC2.42□□□□□ -2.02
RHOP08100 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.42□□□□□ -2.02
RHOP08100 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.41□□□□□ -2.02
RHOP08100 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RHOP08100 RNU6-899P-201ENST00000363947 107 ntBASIC2.41□□□□□ -2.02
RHOP08100 SNORA25.6-201ENST00000364121 118 ntBASIC2.41□□□□□ -2.02
RHOP08100 Y_RNA.240-201ENST00000364469 95 ntBASIC2.41□□□□□ -2.02
RHOP08100 RNU6-923P-201ENST00000364753 107 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms