Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MAPK10-362ENST00000641864 4484 ntBASIC3.27□□□□□ -1.89
PDGFAP04085 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDGFAP04085 Y_RNA.242-201ENST00000364473 110 ntBASIC3.27□□□□□ -1.89
PDGFAP04085 Y_RNA.486-201ENST00000384398 107 ntBASIC3.27□□□□□ -1.89
PDGFAP04085 MIR515-2-201ENST00000384883 83 ntBASIC3.27□□□□□ -1.89
PDGFAP04085 MIR515-1-201ENST00000384884 83 ntBASIC3.27□□□□□ -1.89
PDGFAP04085 RNA5SP323-201ENST00000391094 133 ntBASIC3.27□□□□□ -1.89
PDGFAP04085 TRIAP1P1-201ENST00000427062 225 ntBASIC3.27□□□□□ -1.89
PDGFAP04085 SNRPGP10-201ENST00000432323 225 ntBASIC3.27□□□□□ -1.89
PDGFAP04085 AC009238.1-201ENST00000442165 424 ntBASIC3.27□□□□□ -1.89
PDGFAP04085 AC009237.6-201ENST00000446969 424 ntBASIC3.27□□□□□ -1.89
PDGFAP04085 ATP5J2P3-201ENST00000451550 258 ntBASIC3.27□□□□□ -1.89
PDGFAP04085 RNU6-504P-201ENST00000516568 104 ntBASIC3.27□□□□□ -1.89
PDGFAP04085 RNU6-1291P-201ENST00000516591 104 ntBASIC3.27□□□□□ -1.89
PDGFAP04085 Y_RNA.712-201ENST00000517011 92 ntBASIC3.27□□□□□ -1.89
PDGFAP04085 MIR7851-201ENST00000610611 160 ntBASIC3.27□□□□□ -1.89
PDGFAP04085 U4atac.1-201ENST00000618345 95 ntBASIC3.27□□□□□ -1.89
PDGFAP04085 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PDGFAP04085 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDGFAP04085 Y_RNA.253-201ENST00000364562 112 ntBASIC3.26□□□□□ -1.89
PDGFAP04085 Y_RNA.294-201ENST00000364916 102 ntBASIC3.26□□□□□ -1.89
PDGFAP04085 RNA5SP127-201ENST00000411051 133 ntBASIC3.26□□□□□ -1.89
PDGFAP04085 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.26□□□□□ -1.89
PDGFAP04085 TRBV12-2-201ENST00000489763 344 ntBASIC3.26□□□□□ -1.89
PDGFAP04085 FCF1P8-201ENST00000510322 597 ntBASIC3.26□□□□□ -1.89
PDGFAP04085 Y_RNA.714-201ENST00000517065 90 ntBASIC3.26□□□□□ -1.89
PDGFAP04085 RNA5SP380-201ENST00000517190 98 ntBASIC3.26□□□□□ -1.89
PDGFAP04085 MIR6852-201ENST00000621699 66 ntBASIC3.26□□□□□ -1.89
PDGFAP04085 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
PDGFAP04085 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PDGFAP04085 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PDGFAP04085 RNU6-235P-201ENST00000362644 107 ntBASIC3.25□□□□□ -1.89
PDGFAP04085 RNA5SP374-201ENST00000362939 125 ntBASIC3.25□□□□□ -1.89
PDGFAP04085 Y_RNA.267-201ENST00000364679 109 ntBASIC3.25□□□□□ -1.89
PDGFAP04085 RNU7-94P-201ENST00000459576 63 ntBASIC3.25□□□□□ -1.89
PDGFAP04085 NDUFA4P2-201ENST00000489989 244 ntBASIC3.25□□□□□ -1.89
PDGFAP04085 RN7SL504P-201ENST00000494496 287 ntBASIC3.25□□□□□ -1.89
PDGFAP04085 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.25□□□□□ -1.89
PDGFAP04085 AC007536.1-201ENST00000533382 349 ntBASIC3.25□□□□□ -1.89
PDGFAP04085 AL365205.2-201ENST00000594586 68 ntBASIC3.25□□□□□ -1.89
PDGFAP04085 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.25□□□□□ -1.89
PDGFAP04085 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDGFAP04085 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.24□□□□□ -1.89
PDGFAP04085 ZNF271P-202ENST00000465539 1970 ntBASIC3.24□□□□□ -1.89
PDGFAP04085 AC092435.3-201ENST00000565538 3654 ntBASIC3.24□□□□□ -1.89
PDGFAP04085 RNU6-44P-201ENST00000384045 107 ntBASIC3.24□□□□□ -1.89
PDGFAP04085 MIR624-201ENST00000385217 97 ntBASIC3.24□□□□□ -1.89
PDGFAP04085 SNORA26.7-201ENST00000391288 122 ntBASIC3.24□□□□□ -1.89
PDGFAP04085 RNU6-1064P-201ENST00000410626 104 ntBASIC3.24□□□□□ -1.89
PDGFAP04085 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.24□□□□□ -1.89
PDGFAP04085 AL158823.1-201ENST00000418441 478 ntBASIC3.24□□□□□ -1.89
PDGFAP04085 YWHAEP4-201ENST00000505390 198 ntBASIC3.24□□□□□ -1.89
PDGFAP04085 MRPS17P9-201ENST00000511924 393 ntBASIC3.24□□□□□ -1.89
PDGFAP04085 RPL23AP94-201ENST00000512518 302 ntBASIC3.24□□□□□ -1.89
PDGFAP04085 IGKV2-26-201ENST00000518305 343 ntBASIC3.24□□□□□ -1.89
PDGFAP04085 AC024995.1-201ENST00000523014 93 ntBASIC3.24□□□□□ -1.89
PDGFAP04085 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PDGFAP04085 MIR4513-201ENST00000581077 86 ntBASIC3.24□□□□□ -1.89
PDGFAP04085 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PDGFAP04085 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PDGFAP04085 AC093908.1-201ENST00000623125 8092 ntBASIC3.24□□□□□ -1.89
PDGFAP04085 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PDGFAP04085 Y_RNA.66-201ENST00000362862 102 ntBASIC3.23□□□□□ -1.89
PDGFAP04085 RNU6-283P-201ENST00000364788 107 ntBASIC3.23□□□□□ -1.89
PDGFAP04085 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDGFAP04085 SNORA8-201ENST00000384574 139 ntBASIC3.23□□□□□ -1.89
PDGFAP04085 RNU6-1072P-201ENST00000384703 107 ntBASIC3.23□□□□□ -1.89
PDGFAP04085 RNU6-443P-201ENST00000384780 107 ntBASIC3.23□□□□□ -1.89
PDGFAP04085 AL603914.1-201ENST00000401964 204 ntBASIC3.23□□□□□ -1.89
PDGFAP04085 RNU2-52P-201ENST00000410680 190 ntBASIC3.23□□□□□ -1.89
PDGFAP04085 MLLT10P1-201ENST00000418346 262 ntBASIC3.23□□□□□ -1.89
PDGFAP04085 AL445687.1-201ENST00000439946 251 ntBASIC3.23□□□□□ -1.89
PDGFAP04085 AL158147.1-201ENST00000443970 75 ntBASIC3.23□□□□□ -1.89
PDGFAP04085 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.23□□□□□ -1.89
PDGFAP04085 Y_RNA.690-201ENST00000516603 95 ntBASIC3.23□□□□□ -1.89
PDGFAP04085 AC068657.1-201ENST00000520807 306 ntBASIC3.23□□□□□ -1.89
PDGFAP04085 MIR3121-201ENST00000579680 77 ntBASIC3.23□□□□□ -1.89
PDGFAP04085 AC087685.1-201ENST00000587507 141 ntBASIC3.23□□□□□ -1.89
PDGFAP04085 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.23□□□□□ -1.89
PDGFAP04085 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.23□□□□□ -1.89
PDGFAP04085 U6.108-201ENST00000637764 58 ntBASIC3.23□□□□□ -1.89
PDGFAP04085 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDGFAP04085 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDGFAP04085 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.23□□□□□ -1.89
PDGFAP04085 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDGFAP04085 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PDGFAP04085 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PDGFAP04085 SNORD114-6-201ENST00000364393 72 ntBASIC3.22□□□□□ -1.89
PDGFAP04085 Y_RNA.525-201ENST00000384570 113 ntBASIC3.22□□□□□ -1.89
PDGFAP04085 SNORA12.1-201ENST00000390873 148 ntBASIC3.22□□□□□ -1.89
PDGFAP04085 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.22□□□□□ -1.89
PDGFAP04085 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.22□□□□□ -1.89
PDGFAP04085 AC006483.1-201ENST00000487308 313 ntBASIC3.22□□□□□ -1.89
PDGFAP04085 RNU6-772P-201ENST00000516042 105 ntBASIC3.22□□□□□ -1.89
PDGFAP04085 RN7SKP209-201ENST00000516888 304 ntBASIC3.22□□□□□ -1.89
PDGFAP04085 RNU1-104P-201ENST00000517280 175 ntBASIC3.22□□□□□ -1.89
PDGFAP04085 AC007751.1-201ENST00000529260 376 ntBASIC3.22□□□□□ -1.89
PDGFAP04085 AP002004.2-201ENST00000531656 154 ntBASIC3.22□□□□□ -1.89
PDGFAP04085 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PDGFAP04085 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms