Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AL357312.1-201ENST00000603879 298 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 AC015540.1-201ENST00000615828 501 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 AL359757.2-201ENST00000624309 274 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 RNU6-874P-201ENST00000362390 105 ntBASIC0.65□□□□□ -2.31
MT-ND4P03905 SNORD114-27-201ENST00000363766 70 ntBASIC0.65□□□□□ -2.31
MT-ND4P03905 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
MT-ND4P03905 RNU6-1013P-201ENST00000384180 107 ntBASIC0.65□□□□□ -2.31
MT-ND4P03905 MIR526A1-201ENST00000384897 85 ntBASIC0.65□□□□□ -2.31
MT-ND4P03905 RNU5A-5P-201ENST00000411054 116 ntBASIC0.65□□□□□ -2.31
MT-ND4P03905 MTND5P15-201ENST00000434246 349 ntBASIC0.65□□□□□ -2.31
MT-ND4P03905 Z98949.2-201ENST00000440996 144 ntBASIC0.65□□□□□ -2.31
MT-ND4P03905 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.65□□□□□ -2.31
MT-ND4P03905 AL137792.2-201ENST00000443484 235 ntBASIC0.65□□□□□ -2.31
MT-ND4P03905 PDCD5P2-201ENST00000507570 312 ntBASIC0.65□□□□□ -2.31
MT-ND4P03905 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.65□□□□□ -2.31
MT-ND4P03905 RNU6-197P-201ENST00000516680 100 ntBASIC0.65□□□□□ -2.31
MT-ND4P03905 RNU6-1116P-201ENST00000517269 99 ntBASIC0.65□□□□□ -2.31
MT-ND4P03905 MIR4790-201ENST00000577799 79 ntBASIC0.65□□□□□ -2.31
MT-ND4P03905 MIR3684-201ENST00000579779 74 ntBASIC0.65□□□□□ -2.31
MT-ND4P03905 AC005014.2-201ENST00000607795 599 ntBASIC0.65□□□□□ -2.31
MT-ND4P03905 AL096861.1-201ENST00000610899 123 ntBASIC0.65□□□□□ -2.31
MT-ND4P03905 U6.115-201ENST00000636045 103 ntBASIC0.65□□□□□ -2.31
MT-ND4P03905 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.65□□□□□ -2.31
MT-ND4P03905 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
MT-ND4P03905 Y_RNA.157-201ENST00000363638 102 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 RNU6-117P-201ENST00000365415 107 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 Y_RNA.364-201ENST00000365532 101 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 Y_RNA.450-201ENST00000384198 113 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 Y_RNA.557-201ENST00000384680 107 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
MT-ND4P03905 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.64□□□□□ -2.31
MT-ND4P03905 AC233266.1-201ENST00000454518 96 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 snoU13.25-201ENST00000458945 104 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 U8.22-201ENST00000459141 133 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 RNU7-87P-201ENST00000459343 62 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 AL049830.1-201ENST00000468034 425 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 RPS29P25-201ENST00000481709 171 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 AC093534.1-201ENST00000504977 132 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 RNU6-237P-201ENST00000515985 71 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 AC136628.3-201ENST00000521868 290 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.64□□□□□ -2.31
MT-ND4P03905 PRELID3BP2-201ENST00000605362 201 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 AC242852.1-201ENST00000612151 96 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 AC104260.1-201ENST00000616660 539 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 AC244015.1-201ENST00000622301 99 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 MIR6866-201ENST00000638146 69 ntBASIC0.64□□□□□ -2.31
MT-ND4P03905 HSBP1P2-201ENST00000299671 229 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 MIR373-201ENST00000362273 69 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 RNU6-454P-201ENST00000364292 107 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 RNU4-41P-201ENST00000364426 143 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 Y_RNA.295-201ENST00000364918 102 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 RNU4-12P-201ENST00000365233 139 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 Y_RNA.498-201ENST00000384460 102 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 RNU6-136P-201ENST00000384663 107 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 MIR200A-201ENST00000384875 90 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 SNORA75.2-201ENST00000391138 150 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 SNORA75.3-201ENST00000391231 150 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 RNA5SP118-201ENST00000410385 109 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 RNU6-321P-201ENST00000410912 106 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 AC016907.1-201ENST00000419483 435 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 AL603825.1-201ENST00000438481 80 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 PCNPP5-201ENST00000452246 481 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 RNU7-21P-201ENST00000459430 62 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 MTND5P5-201ENST00000503764 376 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 AC026782.1-201ENST00000512952 449 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 AC108729.3-201ENST00000513484 108 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 AC074133.1-201ENST00000515696 183 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 RNU4-49P-201ENST00000516080 140 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 RNU6-1278P-201ENST00000516130 107 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 Y_RNA.682-201ENST00000516457 100 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 AC105029.1-201ENST00000520250 669 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.63□□□□□ -2.31
MT-ND4P03905 AC018448.1-201ENST00000552843 316 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 FAM106DP-201ENST00000586416 501 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 AC018462.2-201ENST00000605375 395 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 AC004832.4-201ENST00000608952 331 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 AC127459.3-201ENST00000624328 466 ntBASIC0.63□□□□□ -2.31
MT-ND4P03905 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.63□□□□□ -2.31
MT-ND4P03905 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
MT-ND4P03905 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
MT-ND4P03905 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.62□□□□□ -2.31
MT-ND4P03905 MIR410-201ENST00000362222 80 ntBASIC0.62□□□□□ -2.31
MT-ND4P03905 RNU6-879P-201ENST00000364328 108 ntBASIC0.62□□□□□ -2.31
MT-ND4P03905 Y_RNA.436-201ENST00000384097 102 ntBASIC0.62□□□□□ -2.31
MT-ND4P03905 MIR608-201ENST00000384820 100 ntBASIC0.62□□□□□ -2.31
MT-ND4P03905 MIR942-201ENST00000401111 86 ntBASIC0.62□□□□□ -2.31
MT-ND4P03905 MIR873-201ENST00000401120 77 ntBASIC0.62□□□□□ -2.31
MT-ND4P03905 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.62□□□□□ -2.31
MT-ND4P03905 LINC01399-202ENST00000458450 244 ntBASIC0.62□□□□□ -2.31
MT-ND4P03905 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.62□□□□□ -2.31
MT-ND4P03905 RNU6-63P-201ENST00000516690 95 ntBASIC0.62□□□□□ -2.31
MT-ND4P03905 RNU6-1096P-201ENST00000517089 102 ntBASIC0.62□□□□□ -2.31
MT-ND4P03905 AC090142.3-201ENST00000519012 385 ntBASIC0.62□□□□□ -2.31
MT-ND4P03905 AC012557.2-201ENST00000605919 418 ntBASIC0.62□□□□□ -2.31
MT-ND4P03905 AC005828.6-201ENST00000606610 232 ntBASIC0.62□□□□□ -2.31
MT-ND4P03905 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.62□□□□□ -2.31
MT-ND4P03905 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.62□□□□□ -2.31
MT-ND4P03905 MIR6767-201ENST00000637302 66 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms