Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SNORD114-16-201ENST00000363044 70 ntBASIC-0.08□□□□□ -2.42
APOEP02649 MIR520F-201ENST00000384824 87 ntBASIC-0.08□□□□□ -2.42
APOEP02649 AC073415.1-201ENST00000449240 153 ntBASIC-0.08□□□□□ -2.42
APOEP02649 AC079354.2-201ENST00000453523 154 ntBASIC-0.08□□□□□ -2.42
APOEP02649 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.08□□□□□ -2.42
APOEP02649 RPS3AP17-201ENST00000472594 777 ntBASIC-0.08□□□□□ -2.42
APOEP02649 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.08□□□□□ -2.42
APOEP02649 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.08□□□□□ -2.42
APOEP02649 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.08□□□□□ -2.42
APOEP02649 EIF1P4-201ENST00000572664 335 ntBASIC-0.08□□□□□ -2.42
APOEP02649 MIR4424-201ENST00000585257 86 ntBASIC-0.08□□□□□ -2.42
APOEP02649 MIR5692C1-201ENST00000585309 91 ntBASIC-0.08□□□□□ -2.42
APOEP02649 AC104260.1-201ENST00000616660 539 ntBASIC-0.08□□□□□ -2.42
APOEP02649 AC006504.8-201ENST00000621046 635 ntBASIC-0.08□□□□□ -2.42
APOEP02649 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.09□□□□□ -2.42
APOEP02649 RNY3P9-201ENST00000384727 106 ntBASIC-0.09□□□□□ -2.42
APOEP02649 AL606923.1-201ENST00000406616 190 ntBASIC-0.09□□□□□ -2.42
APOEP02649 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.09□□□□□ -2.42
APOEP02649 MRPS10P2-201ENST00000431226 381 ntBASIC-0.09□□□□□ -2.42
APOEP02649 ELOCP24-201ENST00000456370 334 ntBASIC-0.09□□□□□ -2.42
APOEP02649 TPTE2P5-203ENST00000458118 728 ntBASIC-0.09□□□□□ -2.42
APOEP02649 SNORD42A-201ENST00000459584 64 ntBASIC-0.09□□□□□ -2.42
APOEP02649 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.09□□□□□ -2.42
APOEP02649 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.09□□□□□ -2.42
APOEP02649 AC069113.3-201ENST00000521019 150 ntBASIC-0.09□□□□□ -2.42
APOEP02649 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.09□□□□□ -2.42
APOEP02649 AC103705.1-201ENST00000619013 241 ntBASIC-0.09□□□□□ -2.42
APOEP02649 AC009248.2-201ENST00000619826 254 ntBASIC-0.09□□□□□ -2.42
APOEP02649 AC068137.4-201ENST00000638485 296 ntBASIC-0.09□□□□□ -2.42
APOEP02649 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.1□□□□□ -2.43
APOEP02649 SNORD115-32-201ENST00000364079 82 ntBASIC-0.1□□□□□ -2.43
APOEP02649 RNU6-996P-201ENST00000365438 107 ntBASIC-0.1□□□□□ -2.43
APOEP02649 RNU6-933P-201ENST00000384424 107 ntBASIC-0.1□□□□□ -2.43
APOEP02649 RNU6-136P-201ENST00000384663 107 ntBASIC-0.1□□□□□ -2.43
APOEP02649 MIR136-201ENST00000385207 82 ntBASIC-0.1□□□□□ -2.43
APOEP02649 RNU6-248P-201ENST00000410720 107 ntBASIC-0.1□□□□□ -2.43
APOEP02649 SNORA40.8-201ENST00000411034 126 ntBASIC-0.1□□□□□ -2.43
APOEP02649 SNORD71-201ENST00000411292 86 ntBASIC-0.1□□□□□ -2.43
APOEP02649 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.1□□□□□ -2.43
APOEP02649 MTATP6P18-201ENST00000417994 673 ntBASIC-0.1□□□□□ -2.43
APOEP02649 RPL30P16-201ENST00000419341 429 ntBASIC-0.1□□□□□ -2.43
APOEP02649 AC243428.1-201ENST00000421099 264 ntBASIC-0.1□□□□□ -2.43
APOEP02649 CYCSP46-201ENST00000423569 204 ntBASIC-0.1□□□□□ -2.43
APOEP02649 MTCO2P11-201ENST00000431069 680 ntBASIC-0.1□□□□□ -2.43
APOEP02649 MTCO2P16-201ENST00000436962 677 ntBASIC-0.1□□□□□ -2.43
APOEP02649 MTCO3P38-201ENST00000468910 766 ntBASIC-0.1□□□□□ -2.43
APOEP02649 MTCO1P29-201ENST00000496868 288 ntBASIC-0.1□□□□□ -2.43
APOEP02649 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.1□□□□□ -2.43
APOEP02649 RNU7-43P-201ENST00000516554 64 ntBASIC-0.1□□□□□ -2.43
APOEP02649 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.1□□□□□ -2.43
APOEP02649 AL358944.1-201ENST00000528537 144 ntBASIC-0.1□□□□□ -2.43
APOEP02649 AC092747.3-201ENST00000603769 301 ntBASIC-0.1□□□□□ -2.43
APOEP02649 AL109933.3-201ENST00000619095 188 ntBASIC-0.1□□□□□ -2.43
APOEP02649 MIR411-201ENST00000362239 96 ntBASIC-0.11□□□□□ -2.43
APOEP02649 SNORA27.1-201ENST00000362604 124 ntBASIC-0.11□□□□□ -2.43
APOEP02649 RNU4-9P-201ENST00000364951 139 ntBASIC-0.11□□□□□ -2.43
APOEP02649 MIR153-2-201ENST00000385225 87 ntBASIC-0.11□□□□□ -2.43
APOEP02649 RNU6-159P-201ENST00000391080 106 ntBASIC-0.11□□□□□ -2.43
APOEP02649 RNU6-613P-201ENST00000410412 108 ntBASIC-0.11□□□□□ -2.43
APOEP02649 RNU7-63P-201ENST00000459054 62 ntBASIC-0.11□□□□□ -2.43
APOEP02649 snoU13.21-201ENST00000459368 105 ntBASIC-0.11□□□□□ -2.43
APOEP02649 SNORA25.18-201ENST00000607153 114 ntBASIC-0.11□□□□□ -2.43
APOEP02649 AL136370.1-201ENST00000608166 691 ntBASIC-0.11□□□□□ -2.43
APOEP02649 AL355073.2-201ENST00000612106 557 ntBASIC-0.11□□□□□ -2.43
APOEP02649 MIR2909-201ENST00000617113 69 ntBASIC-0.11□□□□□ -2.43
APOEP02649 RNA5SP214-201ENST00000363378 118 ntBASIC-0.12□□□□□ -2.43
APOEP02649 SNORA42.1-201ENST00000363515 137 ntBASIC-0.12□□□□□ -2.43
APOEP02649 RNA5SP457-201ENST00000363657 124 ntBASIC-0.12□□□□□ -2.43
APOEP02649 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.12□□□□□ -2.43
APOEP02649 SNORD114-9-201ENST00000364370 72 ntBASIC-0.12□□□□□ -2.43
APOEP02649 RNU6-541P-201ENST00000384709 110 ntBASIC-0.12□□□□□ -2.43
APOEP02649 RNA5SP127-201ENST00000411051 133 ntBASIC-0.12□□□□□ -2.43
APOEP02649 AL390729.2-201ENST00000416137 156 ntBASIC-0.12□□□□□ -2.43
APOEP02649 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.12□□□□□ -2.43
APOEP02649 AL137792.2-201ENST00000443484 235 ntBASIC-0.12□□□□□ -2.43
APOEP02649 AC093303.1-201ENST00000514549 295 ntBASIC-0.12□□□□□ -2.43
APOEP02649 RNU6-863P-201ENST00000515989 104 ntBASIC-0.12□□□□□ -2.43
APOEP02649 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.12□□□□□ -2.43
APOEP02649 AC087683.1-201ENST00000591187 441 ntBASIC-0.12□□□□□ -2.43
APOEP02649 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.13□□□□□ -2.43
APOEP02649 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
APOEP02649 AC015818.7-201ENST00000428754 109 ntBASIC-0.13□□□□□ -2.43
APOEP02649 AL358934.1-201ENST00000432346 324 ntBASIC-0.13□□□□□ -2.43
APOEP02649 AL353997.1-201ENST00000432936 108 ntBASIC-0.13□□□□□ -2.43
APOEP02649 MTND1P4-201ENST00000435196 415 ntBASIC-0.13□□□□□ -2.43
APOEP02649 AC087499.7-201ENST00000441958 109 ntBASIC-0.13□□□□□ -2.43
APOEP02649 SNORD123-201ENST00000459473 70 ntBASIC-0.13□□□□□ -2.43
APOEP02649 MTATP6P9-201ENST00000515039 680 ntBASIC-0.13□□□□□ -2.43
APOEP02649 RNU6-977P-201ENST00000516411 103 ntBASIC-0.13□□□□□ -2.43
APOEP02649 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.13□□□□□ -2.43
APOEP02649 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.13□□□□□ -2.43
APOEP02649 AL118558.2-201ENST00000556294 238 ntBASIC-0.13□□□□□ -2.43
APOEP02649 MIR3913-1-201ENST00000577744 102 ntBASIC-0.13□□□□□ -2.43
APOEP02649 MIR548AO-201ENST00000579992 96 ntBASIC-0.13□□□□□ -2.43
APOEP02649 AC090616.2-202ENST00000584248 222 ntBASIC-0.13□□□□□ -2.43
APOEP02649 RBM11P1-201ENST00000604951 799 ntBASIC-0.13□□□□□ -2.43
APOEP02649 AL354950.2-201ENST00000617939 290 ntBASIC-0.13□□□□□ -2.43
APOEP02649 MIR4251-201ENST00000635819 61 ntBASIC-0.13□□□□□ -2.43
APOEP02649 MIR371B-201ENST00000638082 66 ntBASIC-0.13□□□□□ -2.43
APOEP02649 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms