Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 RNU6-439P-201ENST00000384188 106 ntBASIC1.28□□□□□ -2.2
TIMP1P01033 SNORD116-29-201ENST00000384516 83 ntBASIC1.28□□□□□ -2.2
TIMP1P01033 SNORA69.1-201ENST00000390904 137 ntBASIC1.28□□□□□ -2.2
TIMP1P01033 RNY4P36-201ENST00000391116 96 ntBASIC1.28□□□□□ -2.2
TIMP1P01033 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.28□□□□□ -2.2
TIMP1P01033 UQCRBP2-201ENST00000447827 297 ntBASIC1.28□□□□□ -2.2
TIMP1P01033 PCNPP5-201ENST00000452246 481 ntBASIC1.28□□□□□ -2.2
TIMP1P01033 snoU13.9-201ENST00000458927 103 ntBASIC1.28□□□□□ -2.2
TIMP1P01033 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.28□□□□□ -2.2
TIMP1P01033 RNU6-507P-201ENST00000516045 100 ntBASIC1.28□□□□□ -2.2
TIMP1P01033 RNU6-107P-201ENST00000516643 102 ntBASIC1.28□□□□□ -2.2
TIMP1P01033 Y_RNA.718-201ENST00000517110 102 ntBASIC1.28□□□□□ -2.2
TIMP1P01033 AC024995.1-201ENST00000523014 93 ntBASIC1.28□□□□□ -2.2
TIMP1P01033 AL355375.2-201ENST00000574825 175 ntBASIC1.28□□□□□ -2.2
TIMP1P01033 AC087588.2-201ENST00000617667 426 ntBASIC1.28□□□□□ -2.2
TIMP1P01033 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.28□□□□□ -2.2
TIMP1P01033 RNA5SP361-201ENST00000362686 118 ntBASIC1.27□□□□□ -2.21
TIMP1P01033 RNU6-1301P-201ENST00000362724 104 ntBASIC1.27□□□□□ -2.21
TIMP1P01033 RNU6-490P-201ENST00000362985 107 ntBASIC1.27□□□□□ -2.21
TIMP1P01033 RNU6-1264P-201ENST00000383891 107 ntBASIC1.27□□□□□ -2.21
TIMP1P01033 Y_RNA.529-201ENST00000384586 119 ntBASIC1.27□□□□□ -2.21
TIMP1P01033 RNU6-360P-201ENST00000390944 104 ntBASIC1.27□□□□□ -2.21
TIMP1P01033 RNU2-7P-201ENST00000410794 178 ntBASIC1.27□□□□□ -2.21
TIMP1P01033 ELOCP21-201ENST00000412558 336 ntBASIC1.27□□□□□ -2.21
TIMP1P01033 MTCO2P27-201ENST00000420740 428 ntBASIC1.27□□□□□ -2.21
TIMP1P01033 AC005908.1-201ENST00000468701 347 ntBASIC1.27□□□□□ -2.21
TIMP1P01033 RPS23P4-201ENST00000487908 423 ntBASIC1.27□□□□□ -2.21
TIMP1P01033 RNA5SP436-201ENST00000516020 115 ntBASIC1.27□□□□□ -2.21
TIMP1P01033 RNA5SP481-201ENST00000516814 122 ntBASIC1.27□□□□□ -2.21
TIMP1P01033 RNU7-4P-201ENST00000516961 62 ntBASIC1.27□□□□□ -2.21
TIMP1P01033 AC019176.1-201ENST00000518519 225 ntBASIC1.27□□□□□ -2.21
TIMP1P01033 AC144568.1-201ENST00000520139 137 ntBASIC1.27□□□□□ -2.21
TIMP1P01033 AC022432.1-201ENST00000595739 310 ntBASIC1.27□□□□□ -2.21
TIMP1P01033 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.27□□□□□ -2.21
TIMP1P01033 AC073544.1-201ENST00000600110 1595 ntBASIC1.26□□□□□ -2.21
TIMP1P01033 Y_RNA.356-201ENST00000365475 113 ntBASIC1.26□□□□□ -2.21
TIMP1P01033 Y_RNA.393-201ENST00000383936 102 ntBASIC1.26□□□□□ -2.21
TIMP1P01033 RNU6-318P-201ENST00000384283 103 ntBASIC1.26□□□□□ -2.21
TIMP1P01033 RNA5SP467-201ENST00000391274 118 ntBASIC1.26□□□□□ -2.21
TIMP1P01033 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.26□□□□□ -2.21
TIMP1P01033 Y_RNA.592-201ENST00000410274 109 ntBASIC1.26□□□□□ -2.21
TIMP1P01033 MTND4P28-201ENST00000426217 387 ntBASIC1.26□□□□□ -2.21
TIMP1P01033 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.26□□□□□ -2.21
TIMP1P01033 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.26□□□□□ -2.21
TIMP1P01033 HSPE1P9-201ENST00000440046 311 ntBASIC1.26□□□□□ -2.21
TIMP1P01033 MTATP6P23-201ENST00000440153 476 ntBASIC1.26□□□□□ -2.21
TIMP1P01033 RNU7-152P-201ENST00000458982 64 ntBASIC1.26□□□□□ -2.21
TIMP1P01033 Y_RNA.632-201ENST00000459189 102 ntBASIC1.26□□□□□ -2.21
TIMP1P01033 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.26□□□□□ -2.21
TIMP1P01033 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
TIMP1P01033 MIR3684-201ENST00000579779 74 ntBASIC1.26□□□□□ -2.21
TIMP1P01033 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.26□□□□□ -2.21
TIMP1P01033 AL357075.2-201ENST00000614906 189 ntBASIC1.26□□□□□ -2.21
TIMP1P01033 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.26□□□□□ -2.21
TIMP1P01033 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
TIMP1P01033 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.25□□□□□ -2.21
TIMP1P01033 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
TIMP1P01033 MIR410-201ENST00000362222 80 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 SNORA33-201ENST00000363664 130 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 Y_RNA.187-201ENST00000363918 113 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 RNU6-1040P-201ENST00000383974 107 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 Y_RNA.498-201ENST00000384460 102 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 MIR559-201ENST00000385188 96 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 RNA5SP323-201ENST00000391094 133 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.25□□□□□ -2.21
TIMP1P01033 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 FTH1P12-201ENST00000432137 551 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 AC236972.2-201ENST00000434979 310 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 AC099799.1-201ENST00000439809 192 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.25□□□□□ -2.21
TIMP1P01033 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 SNORD65B-201ENST00000459126 73 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 SNORD19B-201ENST00000459623 84 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 HMGN1P13-201ENST00000505795 138 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 AC105758.1-201ENST00000506038 399 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 RNU1-142P-201ENST00000516682 145 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 RNA5SP437-201ENST00000517249 129 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 AC018448.1-201ENST00000552843 316 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 AL359075.3-201ENST00000613288 217 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 AC084781.2-201ENST00000615568 161 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 AC006435.5-201ENST00000624486 112 ntBASIC1.25□□□□□ -2.21
TIMP1P01033 RNU6-414P-201ENST00000363705 104 ntBASIC1.24□□□□□ -2.21
TIMP1P01033 SNORD12B-201ENST00000410433 91 ntBASIC1.24□□□□□ -2.21
TIMP1P01033 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.24□□□□□ -2.21
TIMP1P01033 AL163195.1-201ENST00000496941 348 ntBASIC1.24□□□□□ -2.21
TIMP1P01033 AC010598.1-201ENST00000510378 103 ntBASIC1.24□□□□□ -2.21
TIMP1P01033 MTND3P22-201ENST00000510932 243 ntBASIC1.24□□□□□ -2.21
TIMP1P01033 SNORA40.9-201ENST00000515895 93 ntBASIC1.24□□□□□ -2.21
TIMP1P01033 PRR13P7-201ENST00000605538 430 ntBASIC1.24□□□□□ -2.21
TIMP1P01033 LARP7P1-201ENST00000605576 316 ntBASIC1.24□□□□□ -2.21
TIMP1P01033 U6.73-201ENST00000619194 103 ntBASIC1.24□□□□□ -2.21
TIMP1P01033 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
TIMP1P01033 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TIMP1P01033 Y_RNA.146-201ENST00000363549 102 ntBASIC1.23□□□□□ -2.21
TIMP1P01033 Y_RNA.314-201ENST00000365114 102 ntBASIC1.23□□□□□ -2.21
TIMP1P01033 MT-TD-201ENST00000387419 68 ntBASIC1.23□□□□□ -2.21
TIMP1P01033 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
TIMP1P01033 MIR1267-201ENST00000408723 78 ntBASIC1.23□□□□□ -2.21
TIMP1P01033 RNA5SP475-201ENST00000410568 110 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms