Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 MIR548I2-201ENST00000408348 149 ntBASIC2.46□□□□□ -2.02
TOP3BO95985 RNA5SP504-201ENST00000410676 117 ntBASIC2.46□□□□□ -2.02
TOP3BO95985 RNU6-1135P-201ENST00000411083 103 ntBASIC2.46□□□□□ -2.02
TOP3BO95985 AL606753.1-201ENST00000427435 87 ntBASIC2.46□□□□□ -2.02
TOP3BO95985 AL445687.1-201ENST00000439946 251 ntBASIC2.46□□□□□ -2.02
TOP3BO95985 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TOP3BO95985 RNU6-436P-201ENST00000516171 114 ntBASIC2.46□□□□□ -2.02
TOP3BO95985 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.46□□□□□ -2.02
TOP3BO95985 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.46□□□□□ -2.02
TOP3BO95985 AL356280.1-201ENST00000603614 379 ntBASIC2.46□□□□□ -2.02
TOP3BO95985 TCL6_2.1-201ENST00000615162 119 ntBASIC2.46□□□□□ -2.02
TOP3BO95985 U4.3-201ENST00000621047 82 ntBASIC2.46□□□□□ -2.02
TOP3BO95985 RNU6-324P-201ENST00000363957 106 ntBASIC2.45□□□□□ -2.02
TOP3BO95985 SNORD87-201ENST00000364849 89 ntBASIC2.45□□□□□ -2.02
TOP3BO95985 SNORA18.2-201ENST00000383865 132 ntBASIC2.45□□□□□ -2.02
TOP3BO95985 Y_RNA.398-201ENST00000383952 99 ntBASIC2.45□□□□□ -2.02
TOP3BO95985 Y_RNA.441-201ENST00000384123 112 ntBASIC2.45□□□□□ -2.02
TOP3BO95985 MIR29B2-201ENST00000385055 81 ntBASIC2.45□□□□□ -2.02
TOP3BO95985 MIR613-201ENST00000385248 95 ntBASIC2.45□□□□□ -2.02
TOP3BO95985 U3.40-201ENST00000408706 208 ntBASIC2.45□□□□□ -2.02
TOP3BO95985 RPS12P2-201ENST00000439728 269 ntBASIC2.45□□□□□ -2.02
TOP3BO95985 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.45□□□□□ -2.02
TOP3BO95985 AC080013.2-201ENST00000460866 323 ntBASIC2.45□□□□□ -2.02
TOP3BO95985 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TOP3BO95985 HSPE1P18-201ENST00000517602 280 ntBASIC2.45□□□□□ -2.02
TOP3BO95985 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.45□□□□□ -2.02
TOP3BO95985 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.45□□□□□ -2.02
TOP3BO95985 AL049779.4-201ENST00000604500 156 ntBASIC2.45□□□□□ -2.02
TOP3BO95985 AC108706.1-201ENST00000611053 297 ntBASIC2.45□□□□□ -2.02
TOP3BO95985 AC068205.3-201ENST00000636385 468 ntBASIC2.45□□□□□ -2.02
TOP3BO95985 RNU1-72P-201ENST00000362976 153 ntBASIC2.44□□□□□ -2.02
TOP3BO95985 RNU6-704P-201ENST00000364162 103 ntBASIC2.44□□□□□ -2.02
TOP3BO95985 Y_RNA.571-201ENST00000384753 98 ntBASIC2.44□□□□□ -2.02
TOP3BO95985 RNU5E-9P-201ENST00000411164 104 ntBASIC2.44□□□□□ -2.02
TOP3BO95985 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
TOP3BO95985 Y_RNA.637-201ENST00000459424 114 ntBASIC2.44□□□□□ -2.02
TOP3BO95985 AC090515.1-201ENST00000465295 476 ntBASIC2.44□□□□□ -2.02
TOP3BO95985 RNU1-117P-201ENST00000517041 158 ntBASIC2.44□□□□□ -2.02
TOP3BO95985 SUMO2P18-201ENST00000518873 252 ntBASIC2.44□□□□□ -2.02
TOP3BO95985 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.44□□□□□ -2.02
TOP3BO95985 AC009127.3-201ENST00000570531 403 ntBASIC2.44□□□□□ -2.02
TOP3BO95985 MIR1273D-201ENST00000577266 86 ntBASIC2.44□□□□□ -2.02
TOP3BO95985 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.44□□□□□ -2.02
TOP3BO95985 MIR5006-201ENST00000583027 110 ntBASIC2.44□□□□□ -2.02
TOP3BO95985 AL713866.2-201ENST00000603579 219 ntBASIC2.44□□□□□ -2.02
TOP3BO95985 AC004832.4-201ENST00000608952 331 ntBASIC2.44□□□□□ -2.02
TOP3BO95985 AL449363.1-201ENST00000617815 186 ntBASIC2.44□□□□□ -2.02
TOP3BO95985 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.44□□□□□ -2.02
TOP3BO95985 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
TOP3BO95985 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TOP3BO95985 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TOP3BO95985 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.44□□□□□ -2.02
TOP3BO95985 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TOP3BO95985 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TOP3BO95985 WWP1P1-201ENST00000466609 2769 ntBASIC2.43□□□□□ -2.02
TOP3BO95985 RNA5SP456-201ENST00000364002 114 ntBASIC2.43□□□□□ -2.02
TOP3BO95985 RNU1-138P-201ENST00000384093 164 ntBASIC2.43□□□□□ -2.02
TOP3BO95985 SNORA40.19-201ENST00000390846 128 ntBASIC2.43□□□□□ -2.02
TOP3BO95985 RNU6-763P-201ENST00000390865 106 ntBASIC2.43□□□□□ -2.02
TOP3BO95985 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.43□□□□□ -2.02
TOP3BO95985 SUMO1P4-201ENST00000429430 302 ntBASIC2.43□□□□□ -2.02
TOP3BO95985 RNA5SP281-201ENST00000516504 135 ntBASIC2.43□□□□□ -2.02
TOP3BO95985 RNU6-586P-201ENST00000517265 104 ntBASIC2.43□□□□□ -2.02
TOP3BO95985 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.43□□□□□ -2.02
TOP3BO95985 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.43□□□□□ -2.02
TOP3BO95985 MIR5739-201ENST00000619803 80 ntBASIC2.43□□□□□ -2.02
TOP3BO95985 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TOP3BO95985 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
TOP3BO95985 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.42□□□□□ -2.02
TOP3BO95985 AL356292.1-201ENST00000283110 373 ntBASIC2.42□□□□□ -2.02
TOP3BO95985 Y_RNA.7-201ENST00000362352 102 ntBASIC2.42□□□□□ -2.02
TOP3BO95985 SNORD115-30-201ENST00000364117 82 ntBASIC2.42□□□□□ -2.02
TOP3BO95985 SNORD50.2-201ENST00000365465 70 ntBASIC2.42□□□□□ -2.02
TOP3BO95985 RNU4-17P-201ENST00000365598 141 ntBASIC2.42□□□□□ -2.02
TOP3BO95985 SNORA12-201ENST00000391162 147 ntBASIC2.42□□□□□ -2.02
TOP3BO95985 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.42□□□□□ -2.02
TOP3BO95985 AL356320.1-201ENST00000429616 163 ntBASIC2.42□□□□□ -2.02
TOP3BO95985 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.42□□□□□ -2.02
TOP3BO95985 RNU2-44P-201ENST00000516795 194 ntBASIC2.42□□□□□ -2.02
TOP3BO95985 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
TOP3BO95985 Y_RNA.272-201ENST00000364696 102 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 Y_RNA.291-201ENST00000364886 113 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 RNU6-1274P-201ENST00000384557 107 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 AL031003.1-201ENST00000404229 172 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TOP3BO95985 RNU2-2P-201ENST00000410396 191 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 TOMM22P2-201ENST00000430735 237 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 AL135790.2-201ENST00000437701 267 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 U8.19-201ENST00000459095 133 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 AC234781.5-201ENST00000508429 271 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.41□□□□□ -2.02
TOP3BO95985 RNU2-4P-201ENST00000606190 192 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 U2.15-201ENST00000611544 191 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 U2.16-201ENST00000613119 191 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 U2.12-201ENST00000613778 191 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 U2.9-201ENST00000615427 191 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 AL078604.3-201ENST00000615580 211 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 U2.11-201ENST00000616345 191 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 U2.2-201ENST00000616535 191 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms