Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 MIR2355-201ENST00000517199 87 ntBASIC1□□□□□ -2.25
MBD3O95983 AF235103.2-201ENST00000525753 346 ntBASIC1□□□□□ -2.25
MBD3O95983 Y_RNA.6-201ENST00000362350 114 ntBASIC0.99□□□□□ -2.25
MBD3O95983 Y_RNA.48-201ENST00000362710 103 ntBASIC0.99□□□□□ -2.25
MBD3O95983 RNU4-79P-201ENST00000362764 141 ntBASIC0.99□□□□□ -2.25
MBD3O95983 RNY1P16-201ENST00000363063 111 ntBASIC0.99□□□□□ -2.25
MBD3O95983 Y_RNA.482-201ENST00000384377 111 ntBASIC0.99□□□□□ -2.25
MBD3O95983 RNU6-1215P-201ENST00000384441 102 ntBASIC0.99□□□□□ -2.25
MBD3O95983 Y_RNA.557-201ENST00000384680 107 ntBASIC0.99□□□□□ -2.25
MBD3O95983 MIR520G-201ENST00000385064 90 ntBASIC0.99□□□□□ -2.25
MBD3O95983 SNORD115-47-201ENST00000391226 86 ntBASIC0.99□□□□□ -2.25
MBD3O95983 Y_RNA.594-201ENST00000410373 140 ntBASIC0.99□□□□□ -2.25
MBD3O95983 RNU6-1050P-201ENST00000410388 107 ntBASIC0.99□□□□□ -2.25
MBD3O95983 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.99□□□□□ -2.25
MBD3O95983 AC116353.2-201ENST00000505332 712 ntBASIC0.99□□□□□ -2.25
MBD3O95983 AC022493.2-201ENST00000506122 481 ntBASIC0.99□□□□□ -2.25
MBD3O95983 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.99□□□□□ -2.25
MBD3O95983 RNU2-56P-201ENST00000516826 190 ntBASIC0.99□□□□□ -2.25
MBD3O95983 AC027419.1-201ENST00000522976 328 ntBASIC0.99□□□□□ -2.25
MBD3O95983 AC018448.1-201ENST00000552843 316 ntBASIC0.99□□□□□ -2.25
MBD3O95983 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.99□□□□□ -2.25
MBD3O95983 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.99□□□□□ -2.25
MBD3O95983 AC013244.2-201ENST00000603396 103 ntBASIC0.99□□□□□ -2.25
MBD3O95983 U6.115-201ENST00000636045 103 ntBASIC0.99□□□□□ -2.25
MBD3O95983 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.98□□□□□ -2.25
MBD3O95983 RNU4-40P-201ENST00000364351 143 ntBASIC0.98□□□□□ -2.25
MBD3O95983 Y_RNA.339-201ENST00000365325 102 ntBASIC0.98□□□□□ -2.25
MBD3O95983 RNU6-117P-201ENST00000365415 107 ntBASIC0.98□□□□□ -2.25
MBD3O95983 Y_RNA.498-201ENST00000384460 102 ntBASIC0.98□□□□□ -2.25
MBD3O95983 SNORD41-201ENST00000386967 70 ntBASIC0.98□□□□□ -2.25
MBD3O95983 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.98□□□□□ -2.25
MBD3O95983 U8.16-201ENST00000391279 133 ntBASIC0.98□□□□□ -2.25
MBD3O95983 MIR873-201ENST00000401120 77 ntBASIC0.98□□□□□ -2.25
MBD3O95983 AL451046.2-201ENST00000403074 277 ntBASIC0.98□□□□□ -2.25
MBD3O95983 MTND3P8-201ENST00000412909 339 ntBASIC0.98□□□□□ -2.25
MBD3O95983 AC018865.2-201ENST00000423631 129 ntBASIC0.98□□□□□ -2.25
MBD3O95983 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.98□□□□□ -2.25
MBD3O95983 AC245047.7-201ENST00000440265 293 ntBASIC0.98□□□□□ -2.25
MBD3O95983 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
MBD3O95983 AC018710.1-201ENST00000506509 158 ntBASIC0.98□□□□□ -2.25
MBD3O95983 RNU6-922P-201ENST00000516753 99 ntBASIC0.98□□□□□ -2.25
MBD3O95983 Y_RNA.708-201ENST00000516950 96 ntBASIC0.98□□□□□ -2.25
MBD3O95983 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.98□□□□□ -2.25
MBD3O95983 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.98□□□□□ -2.25
MBD3O95983 RNU6-1310P-201ENST00000384153 107 ntBASIC0.97□□□□□ -2.25
MBD3O95983 CALM2P4-201ENST00000430810 426 ntBASIC0.97□□□□□ -2.25
MBD3O95983 AC091021.1-201ENST00000468051 388 ntBASIC0.97□□□□□ -2.25
MBD3O95983 AC005840.1-201ENST00000498412 377 ntBASIC0.97□□□□□ -2.25
MBD3O95983 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
MBD3O95983 SNORA31.2-201ENST00000516019 134 ntBASIC0.97□□□□□ -2.25
MBD3O95983 RNU6-351P-201ENST00000516097 100 ntBASIC0.97□□□□□ -2.25
MBD3O95983 RNU6-307P-201ENST00000516743 106 ntBASIC0.97□□□□□ -2.25
MBD3O95983 MIR4778-201ENST00000577635 80 ntBASIC0.97□□□□□ -2.25
MBD3O95983 FAM71BP1-201ENST00000604431 523 ntBASIC0.97□□□□□ -2.25
MBD3O95983 AL357075.2-201ENST00000614906 189 ntBASIC0.97□□□□□ -2.25
MBD3O95983 AC106754.2-201ENST00000623006 233 ntBASIC0.97□□□□□ -2.25
MBD3O95983 AC127459.3-201ENST00000624328 466 ntBASIC0.97□□□□□ -2.25
MBD3O95983 Y_RNA.2-201ENST00000362330 96 ntBASIC0.96□□□□□ -2.26
MBD3O95983 SNORA1B-201ENST00000362535 133 ntBASIC0.96□□□□□ -2.26
MBD3O95983 Y_RNA.238-201ENST00000364441 102 ntBASIC0.96□□□□□ -2.26
MBD3O95983 Y_RNA.243-201ENST00000364481 109 ntBASIC0.96□□□□□ -2.26
MBD3O95983 Y_RNA.361-201ENST00000365515 120 ntBASIC0.96□□□□□ -2.26
MBD3O95983 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
MBD3O95983 RNA5SP475-201ENST00000410568 110 ntBASIC0.96□□□□□ -2.26
MBD3O95983 AC011352.1-201ENST00000512300 793 ntBASIC0.96□□□□□ -2.26
MBD3O95983 Y_RNA.670-201ENST00000516255 105 ntBASIC0.96□□□□□ -2.26
MBD3O95983 RNU6-917P-201ENST00000516294 104 ntBASIC0.96□□□□□ -2.26
MBD3O95983 AC093783.1-201ENST00000612976 329 ntBASIC0.96□□□□□ -2.26
MBD3O95983 MIR3674-201ENST00000636576 68 ntBASIC0.96□□□□□ -2.26
MBD3O95983 MIRLET7C-201ENST00000362160 84 ntBASIC0.95□□□□□ -2.26
MBD3O95983 Y_RNA.72-201ENST00000362894 103 ntBASIC0.95□□□□□ -2.26
MBD3O95983 RNU6-879P-201ENST00000364328 108 ntBASIC0.95□□□□□ -2.26
MBD3O95983 RNU6-392P-201ENST00000364926 101 ntBASIC0.95□□□□□ -2.26
MBD3O95983 RNU6-376P-201ENST00000384731 106 ntBASIC0.95□□□□□ -2.26
MBD3O95983 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.95□□□□□ -2.26
MBD3O95983 AL589823.1-201ENST00000429577 183 ntBASIC0.95□□□□□ -2.26
MBD3O95983 AC107399.1-201ENST00000451226 265 ntBASIC0.95□□□□□ -2.26
MBD3O95983 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.95□□□□□ -2.26
MBD3O95983 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.95□□□□□ -2.26
MBD3O95983 SNORD79.1-201ENST00000516069 84 ntBASIC0.95□□□□□ -2.26
MBD3O95983 MIR4661-201ENST00000582720 75 ntBASIC0.95□□□□□ -2.26
MBD3O95983 AL020996.3-201ENST00000606617 222 ntBASIC0.95□□□□□ -2.26
MBD3O95983 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.95□□□□□ -2.26
MBD3O95983 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.95□□□□□ -2.26
MBD3O95983 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.95□□□□□ -2.26
MBD3O95983 AC091895.1-201ENST00000624494 256 ntBASIC0.95□□□□□ -2.26
MBD3O95983 RNU6-874P-201ENST00000362390 105 ntBASIC0.94□□□□□ -2.26
MBD3O95983 Y_RNA.86-201ENST00000363020 111 ntBASIC0.94□□□□□ -2.26
MBD3O95983 RNU6-833P-201ENST00000363486 107 ntBASIC0.94□□□□□ -2.26
MBD3O95983 RNU6-407P-201ENST00000365280 104 ntBASIC0.94□□□□□ -2.26
MBD3O95983 RNU6-318P-201ENST00000384283 103 ntBASIC0.94□□□□□ -2.26
MBD3O95983 MIR499A-201ENST00000384903 122 ntBASIC0.94□□□□□ -2.26
MBD3O95983 RNU6-910P-201ENST00000390844 107 ntBASIC0.94□□□□□ -2.26
MBD3O95983 RPS3AP52-201ENST00000435639 297 ntBASIC0.94□□□□□ -2.26
MBD3O95983 RPL39P39-201ENST00000455840 151 ntBASIC0.94□□□□□ -2.26
MBD3O95983 AL049830.1-201ENST00000468034 425 ntBASIC0.94□□□□□ -2.26
MBD3O95983 AC048334.1-201ENST00000477975 159 ntBASIC0.94□□□□□ -2.26
MBD3O95983 RNU7-12P-201ENST00000516030 62 ntBASIC0.94□□□□□ -2.26
MBD3O95983 AC136932.1-201ENST00000574771 208 ntBASIC0.94□□□□□ -2.26
MBD3O95983 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms