Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 Y_RNA.151-201ENST00000363566 112 ntBASIC0.28□□□□□ -2.36
VAPBO95292 MRPS18CP6-201ENST00000423587 223 ntBASIC0.28□□□□□ -2.36
VAPBO95292 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.28□□□□□ -2.36
VAPBO95292 PIGPP3-201ENST00000425307 415 ntBASIC0.28□□□□□ -2.36
VAPBO95292 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.28□□□□□ -2.36
VAPBO95292 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.28□□□□□ -2.36
VAPBO95292 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
VAPBO95292 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.28□□□□□ -2.36
VAPBO95292 RNU7-41P-201ENST00000515917 61 ntBASIC0.28□□□□□ -2.36
VAPBO95292 RNU6-415P-201ENST00000516252 97 ntBASIC0.28□□□□□ -2.36
VAPBO95292 AC036111.3-201ENST00000526389 112 ntBASIC0.28□□□□□ -2.36
VAPBO95292 MTND1P24-201ENST00000552175 861 ntBASIC0.28□□□□□ -2.36
VAPBO95292 MTATP6P24-201ENST00000576835 677 ntBASIC0.28□□□□□ -2.36
VAPBO95292 MIR4300-201ENST00000581016 96 ntBASIC0.28□□□□□ -2.36
VAPBO95292 AC024933.1-201ENST00000608472 348 ntBASIC0.28□□□□□ -2.36
VAPBO95292 AL589743.1-201ENST00000551932 2712 ntBASIC0.28□□□□□ -2.37
VAPBO95292 AC121333.1-201ENST00000567488 2709 ntBASIC0.28□□□□□ -2.37
VAPBO95292 AC073544.1-201ENST00000600110 1595 ntBASIC0.28□□□□□ -2.37
VAPBO95292 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
VAPBO95292 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
VAPBO95292 SNORA27.1-201ENST00000362604 124 ntBASIC0.27□□□□□ -2.37
VAPBO95292 RNA5SP48-201ENST00000363969 126 ntBASIC0.27□□□□□ -2.37
VAPBO95292 SNORD14.1-201ENST00000365609 90 ntBASIC0.27□□□□□ -2.37
VAPBO95292 MIR514A2-201ENST00000385131 88 ntBASIC0.27□□□□□ -2.37
VAPBO95292 MIR514A3-201ENST00000385132 88 ntBASIC0.27□□□□□ -2.37
VAPBO95292 SNORD105-201ENST00000386910 85 ntBASIC0.27□□□□□ -2.37
VAPBO95292 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.27□□□□□ -2.37
VAPBO95292 MTND3P7-201ENST00000474435 343 ntBASIC0.27□□□□□ -2.37
VAPBO95292 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.27□□□□□ -2.37
VAPBO95292 RNA5SP436-201ENST00000516020 115 ntBASIC0.27□□□□□ -2.37
VAPBO95292 RNU6-1096P-201ENST00000517089 102 ntBASIC0.27□□□□□ -2.37
VAPBO95292 AC023442.1-201ENST00000531247 422 ntBASIC0.27□□□□□ -2.37
VAPBO95292 AC099654.12-201ENST00000639868 649 ntBASIC0.27□□□□□ -2.37
VAPBO95292 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
VAPBO95292 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
VAPBO95292 RNU6-522P-201ENST00000364497 107 ntBASIC0.26□□□□□ -2.37
VAPBO95292 VTRNA1-3-201ENST00000365645 89 ntBASIC0.26□□□□□ -2.37
VAPBO95292 MIR15B-201ENST00000385045 98 ntBASIC0.26□□□□□ -2.37
VAPBO95292 MIR140-201ENST00000385282 100 ntBASIC0.26□□□□□ -2.37
VAPBO95292 RNU4-55P-201ENST00000410731 137 ntBASIC0.26□□□□□ -2.37
VAPBO95292 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.26□□□□□ -2.37
VAPBO95292 MTND3P16-201ENST00000452205 344 ntBASIC0.26□□□□□ -2.37
VAPBO95292 AC083798.1-201ENST00000472671 131 ntBASIC0.26□□□□□ -2.37
VAPBO95292 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.26□□□□□ -2.37
VAPBO95292 RNU7-175P-201ENST00000515915 61 ntBASIC0.26□□□□□ -2.37
VAPBO95292 RN7SKP298-201ENST00000515950 94 ntBASIC0.26□□□□□ -2.37
VAPBO95292 AF235103.2-201ENST00000525753 346 ntBASIC0.26□□□□□ -2.37
VAPBO95292 AC093027.1-201ENST00000546698 429 ntBASIC0.26□□□□□ -2.37
VAPBO95292 AC097520.1-201ENST00000624435 385 ntBASIC0.26□□□□□ -2.37
VAPBO95292 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.26□□□□□ -2.37
VAPBO95292 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.26□□□□□ -2.37
VAPBO95292 AC090625.1-201ENST00000357130 210 ntBASIC0.25□□□□□ -2.37
VAPBO95292 SNORD68-201ENST00000363214 84 ntBASIC0.25□□□□□ -2.37
VAPBO95292 Y_RNA.118-201ENST00000363300 101 ntBASIC0.25□□□□□ -2.37
VAPBO95292 RNU6-1322P-201ENST00000364309 107 ntBASIC0.25□□□□□ -2.37
VAPBO95292 SNORA69-201ENST00000383895 132 ntBASIC0.25□□□□□ -2.37
VAPBO95292 RNU6-342P-201ENST00000384521 104 ntBASIC0.25□□□□□ -2.37
VAPBO95292 RNU6-1105P-201ENST00000384774 107 ntBASIC0.25□□□□□ -2.37
VAPBO95292 AC243428.1-201ENST00000421099 264 ntBASIC0.25□□□□□ -2.37
VAPBO95292 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.25□□□□□ -2.37
VAPBO95292 PCNPP5-201ENST00000452246 481 ntBASIC0.25□□□□□ -2.37
VAPBO95292 AC083904.1-201ENST00000487828 231 ntBASIC0.25□□□□□ -2.37
VAPBO95292 SNORA74.3-201ENST00000517108 154 ntBASIC0.25□□□□□ -2.37
VAPBO95292 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.25□□□□□ -2.37
VAPBO95292 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.25□□□□□ -2.37
VAPBO95292 AP001330.5-201ENST00000607176 411 ntBASIC0.25□□□□□ -2.37
VAPBO95292 AC007742.2-201ENST00000618226 398 ntBASIC0.25□□□□□ -2.37
VAPBO95292 AC127459.3-201ENST00000624328 466 ntBASIC0.25□□□□□ -2.37
VAPBO95292 MIRLET7D-201ENST00000362263 87 ntBASIC0.24□□□□□ -2.37
VAPBO95292 RNU6-117P-201ENST00000365415 107 ntBASIC0.24□□□□□ -2.37
VAPBO95292 RNU6-1264P-201ENST00000383891 107 ntBASIC0.24□□□□□ -2.37
VAPBO95292 MIR136-201ENST00000385207 82 ntBASIC0.24□□□□□ -2.37
VAPBO95292 MIR1827-201ENST00000408549 66 ntBASIC0.24□□□□□ -2.37
VAPBO95292 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.24□□□□□ -2.37
VAPBO95292 MTND4LP16-201ENST00000440828 295 ntBASIC0.24□□□□□ -2.37
VAPBO95292 AL137792.2-201ENST00000443484 235 ntBASIC0.24□□□□□ -2.37
VAPBO95292 AC114811.1-201ENST00000507207 168 ntBASIC0.24□□□□□ -2.37
VAPBO95292 RNU11-2P-201ENST00000516898 142 ntBASIC0.24□□□□□ -2.37
VAPBO95292 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.24□□□□□ -2.37
VAPBO95292 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
VAPBO95292 AC087752.4-201ENST00000605911 462 ntBASIC0.24□□□□□ -2.37
VAPBO95292 MIR1-1-201ENST00000362147 71 ntBASIC0.23□□□□□ -2.37
VAPBO95292 RNU6-254P-201ENST00000363377 107 ntBASIC0.23□□□□□ -2.37
VAPBO95292 SNORD114-23-201ENST00000363536 72 ntBASIC0.23□□□□□ -2.37
VAPBO95292 SNORD113.3-201ENST00000364630 78 ntBASIC0.23□□□□□ -2.37
VAPBO95292 SNORA75-201ENST00000384158 137 ntBASIC0.23□□□□□ -2.37
VAPBO95292 Y_RNA.481-201ENST00000384373 102 ntBASIC0.23□□□□□ -2.37
VAPBO95292 RNU6-95P-201ENST00000384697 107 ntBASIC0.23□□□□□ -2.37
VAPBO95292 MIR489-201ENST00000384923 84 ntBASIC0.23□□□□□ -2.37
VAPBO95292 MIR517A-201ENST00000385001 87 ntBASIC0.23□□□□□ -2.37
VAPBO95292 MIR216A-201ENST00000385063 110 ntBASIC0.23□□□□□ -2.37
VAPBO95292 MIR516B2-201ENST00000385190 85 ntBASIC0.23□□□□□ -2.37
VAPBO95292 MIR613-201ENST00000385248 95 ntBASIC0.23□□□□□ -2.37
VAPBO95292 MIR1298-201ENST00000408783 112 ntBASIC0.23□□□□□ -2.37
VAPBO95292 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.23□□□□□ -2.37
VAPBO95292 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.23□□□□□ -2.37
VAPBO95292 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.23□□□□□ -2.37
VAPBO95292 MTND1P11-201ENST00000456661 876 ntBASIC0.23□□□□□ -2.37
VAPBO95292 AC046134.1-201ENST00000514454 666 ntBASIC0.23□□□□□ -2.37
VAPBO95292 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms