Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 Y_RNA.711-201ENST00000516993 102 ntBASIC1.75□□□□□ -2.13
GPC4O75487 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.75□□□□□ -2.13
GPC4O75487 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.75□□□□□ -2.13
GPC4O75487 MIR3171-201ENST00000584270 74 ntBASIC1.75□□□□□ -2.13
GPC4O75487 MIR6845-201ENST00000613182 61 ntBASIC1.75□□□□□ -2.13
GPC4O75487 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
GPC4O75487 RNU1-22P-201ENST00000363334 158 ntBASIC1.74□□□□□ -2.13
GPC4O75487 SNORD14.1-201ENST00000365609 90 ntBASIC1.74□□□□□ -2.13
GPC4O75487 Y_RNA.446-201ENST00000384178 104 ntBASIC1.74□□□□□ -2.13
GPC4O75487 RPL21P1-201ENST00000399532 476 ntBASIC1.74□□□□□ -2.13
GPC4O75487 RNU2-54P-201ENST00000410299 190 ntBASIC1.74□□□□□ -2.13
GPC4O75487 HSPE1P21-201ENST00000438283 308 ntBASIC1.74□□□□□ -2.13
GPC4O75487 RPEP5-201ENST00000441137 268 ntBASIC1.74□□□□□ -2.13
GPC4O75487 HMGN2P23-201ENST00000456759 269 ntBASIC1.74□□□□□ -2.13
GPC4O75487 AL163540.1-201ENST00000485382 386 ntBASIC1.74□□□□□ -2.13
GPC4O75487 AC093852.1-201ENST00000503587 266 ntBASIC1.74□□□□□ -2.13
GPC4O75487 AC097462.1-201ENST00000514125 324 ntBASIC1.74□□□□□ -2.13
GPC4O75487 RNU6-295P-201ENST00000516901 104 ntBASIC1.74□□□□□ -2.13
GPC4O75487 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.74□□□□□ -2.13
GPC4O75487 AL121655.1-201ENST00000605811 308 ntBASIC1.74□□□□□ -2.13
GPC4O75487 AC040896.1-201ENST00000613819 479 ntBASIC1.74□□□□□ -2.13
GPC4O75487 AC095038.3-201ENST00000634439 195 ntBASIC1.74□□□□□ -2.13
GPC4O75487 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
GPC4O75487 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
GPC4O75487 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
GPC4O75487 Y_RNA.361-201ENST00000365515 120 ntBASIC1.73□□□□□ -2.13
GPC4O75487 Y_RNA.471-201ENST00000384312 102 ntBASIC1.73□□□□□ -2.13
GPC4O75487 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.73□□□□□ -2.13
GPC4O75487 MTCYBP6-201ENST00000441810 138 ntBASIC1.73□□□□□ -2.13
GPC4O75487 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.73□□□□□ -2.13
GPC4O75487 RNU6-397P-201ENST00000516226 104 ntBASIC1.73□□□□□ -2.13
GPC4O75487 SNORA31.10-201ENST00000516482 106 ntBASIC1.73□□□□□ -2.13
GPC4O75487 MIR3684-201ENST00000579779 74 ntBASIC1.73□□□□□ -2.13
GPC4O75487 AL390123.1-201ENST00000603216 237 ntBASIC1.73□□□□□ -2.13
GPC4O75487 AC073413.2-201ENST00000604332 360 ntBASIC1.73□□□□□ -2.13
GPC4O75487 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
GPC4O75487 SNORD48-201ENST00000364953 64 ntBASIC1.72□□□□□ -2.13
GPC4O75487 RNU6-1175P-201ENST00000365200 107 ntBASIC1.72□□□□□ -2.13
GPC4O75487 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.72□□□□□ -2.13
GPC4O75487 Y_RNA.424-201ENST00000384063 103 ntBASIC1.72□□□□□ -2.13
GPC4O75487 Y_RNA.570-201ENST00000384750 101 ntBASIC1.72□□□□□ -2.13
GPC4O75487 RNU6-360P-201ENST00000390944 104 ntBASIC1.72□□□□□ -2.13
GPC4O75487 SNORA26.9-201ENST00000391322 122 ntBASIC1.72□□□□□ -2.13
GPC4O75487 MIR873-201ENST00000401120 77 ntBASIC1.72□□□□□ -2.13
GPC4O75487 MRPL42P3-201ENST00000401492 326 ntBASIC1.72□□□□□ -2.13
GPC4O75487 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.72□□□□□ -2.13
GPC4O75487 AC010154.1-201ENST00000425857 269 ntBASIC1.72□□□□□ -2.13
GPC4O75487 AL591806.2-201ENST00000433122 173 ntBASIC1.72□□□□□ -2.13
GPC4O75487 AC069257.2-201ENST00000441819 155 ntBASIC1.72□□□□□ -2.13
GPC4O75487 snoU13.23-201ENST00000458863 104 ntBASIC1.72□□□□□ -2.13
GPC4O75487 AC010655.3-201ENST00000478818 450 ntBASIC1.72□□□□□ -2.13
GPC4O75487 RNU6-63P-201ENST00000516690 95 ntBASIC1.72□□□□□ -2.13
GPC4O75487 RNU7-172P-201ENST00000517125 64 ntBASIC1.72□□□□□ -2.13
GPC4O75487 MIR4423-201ENST00000580922 80 ntBASIC1.72□□□□□ -2.13
GPC4O75487 AL356055.1-201ENST00000602528 446 ntBASIC1.72□□□□□ -2.13
GPC4O75487 AC022441.3-201ENST00000605737 136 ntBASIC1.72□□□□□ -2.13
GPC4O75487 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
GPC4O75487 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.72□□□□□ -2.13
GPC4O75487 RNU6-661P-201ENST00000362409 107 ntBASIC1.71□□□□□ -2.14
GPC4O75487 Y_RNA.143-201ENST00000363520 106 ntBASIC1.71□□□□□ -2.14
GPC4O75487 Y_RNA.230-201ENST00000364348 109 ntBASIC1.71□□□□□ -2.14
GPC4O75487 RNU6-117P-201ENST00000365415 107 ntBASIC1.71□□□□□ -2.14
GPC4O75487 RNU6-203P-201ENST00000384038 104 ntBASIC1.71□□□□□ -2.14
GPC4O75487 RNU6-937P-201ENST00000384325 106 ntBASIC1.71□□□□□ -2.14
GPC4O75487 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
GPC4O75487 RNU6-823P-201ENST00000391042 103 ntBASIC1.71□□□□□ -2.14
GPC4O75487 AL031003.1-201ENST00000404229 172 ntBASIC1.71□□□□□ -2.14
GPC4O75487 AC005908.1-201ENST00000468701 347 ntBASIC1.71□□□□□ -2.14
GPC4O75487 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.71□□□□□ -2.14
GPC4O75487 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.71□□□□□ -2.14
GPC4O75487 RNU6-436P-201ENST00000516171 114 ntBASIC1.71□□□□□ -2.14
GPC4O75487 RNU6-155P-201ENST00000516347 100 ntBASIC1.71□□□□□ -2.14
GPC4O75487 RNU6-988P-201ENST00000519081 107 ntBASIC1.71□□□□□ -2.14
GPC4O75487 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.71□□□□□ -2.14
GPC4O75487 MIR4255-201ENST00000579351 72 ntBASIC1.71□□□□□ -2.14
GPC4O75487 AC124312.5-201ENST00000604451 268 ntBASIC1.71□□□□□ -2.14
GPC4O75487 AC016925.2-201ENST00000605108 242 ntBASIC1.71□□□□□ -2.14
GPC4O75487 Y_RNA.772-201ENST00000606692 102 ntBASIC1.71□□□□□ -2.14
GPC4O75487 AC084768.2-201ENST00000622736 221 ntBASIC1.71□□□□□ -2.14
GPC4O75487 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
GPC4O75487 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.71□□□□□ -2.14
GPC4O75487 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
GPC4O75487 Y_RNA.172-201ENST00000363765 102 ntBASIC1.7□□□□□ -2.14
GPC4O75487 RNU4-50P-201ENST00000364361 141 ntBASIC1.7□□□□□ -2.14
GPC4O75487 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.7□□□□□ -2.14
GPC4O75487 Y_RNA.527-201ENST00000384573 102 ntBASIC1.7□□□□□ -2.14
GPC4O75487 AL078595.1-201ENST00000404458 226 ntBASIC1.7□□□□□ -2.14
GPC4O75487 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.7□□□□□ -2.14
GPC4O75487 U8.20-201ENST00000459445 131 ntBASIC1.7□□□□□ -2.14
GPC4O75487 RPS26P55-201ENST00000471178 356 ntBASIC1.7□□□□□ -2.14
GPC4O75487 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
GPC4O75487 RNU6-1046P-201ENST00000516538 107 ntBASIC1.7□□□□□ -2.14
GPC4O75487 RNA5SP481-201ENST00000516814 122 ntBASIC1.7□□□□□ -2.14
GPC4O75487 RNU6-250P-201ENST00000516958 103 ntBASIC1.7□□□□□ -2.14
GPC4O75487 RNU6-1137P-201ENST00000517073 99 ntBASIC1.7□□□□□ -2.14
GPC4O75487 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.7□□□□□ -2.14
GPC4O75487 SNORA77B-201ENST00000578179 125 ntBASIC1.7□□□□□ -2.14
GPC4O75487 AC044792.1-201ENST00000593294 196 ntBASIC1.7□□□□□ -2.14
GPC4O75487 AL929325.1-201ENST00000603096 117 ntBASIC1.7□□□□□ -2.14
GPC4O75487 AC006380.1-201ENST00000603598 186 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms