Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC105245.1-201ENST00000581934 244 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 AL020997.2-201ENST00000602607 184 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 RPL17P51-201ENST00000605218 238 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 AC110079.1-202ENST00000635213 138 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM13O60858 AC026241.1-201ENST00000517873 2142 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM13O60858 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM13O60858 AC091564.4-201ENST00000533934 2194 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM13O60858 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
TRIM13O60858 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM13O60858 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM13O60858 AL136360.1-201ENST00000503377 1900 ntBASIC2.92□□□□□ -1.94
TRIM13O60858 RNU6-655P-201ENST00000362858 107 ntBASIC2.92□□□□□ -1.94
TRIM13O60858 RNU6-1210P-201ENST00000363775 107 ntBASIC2.92□□□□□ -1.94
TRIM13O60858 RNA5SP173-201ENST00000364857 136 ntBASIC2.92□□□□□ -1.94
TRIM13O60858 MIR488-201ENST00000365739 83 ntBASIC2.92□□□□□ -1.94
TRIM13O60858 RNU1-57P-201ENST00000384491 166 ntBASIC2.92□□□□□ -1.94
TRIM13O60858 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
TRIM13O60858 SNORD88.1-201ENST00000408684 91 ntBASIC2.92□□□□□ -1.94
TRIM13O60858 AC009414.1-201ENST00000427200 443 ntBASIC2.92□□□□□ -1.94
TRIM13O60858 AC104332.2-201ENST00000429959 156 ntBASIC2.92□□□□□ -1.94
TRIM13O60858 CALM2P4-201ENST00000430810 426 ntBASIC2.92□□□□□ -1.94
TRIM13O60858 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM13O60858 AC006445.1-201ENST00000491925 405 ntBASIC2.92□□□□□ -1.94
TRIM13O60858 AC083906.5-201ENST00000503722 328 ntBASIC2.92□□□□□ -1.94
TRIM13O60858 SNORA18.4-201ENST00000516440 124 ntBASIC2.92□□□□□ -1.94
TRIM13O60858 AC023632.4-201ENST00000517783 191 ntBASIC2.92□□□□□ -1.94
TRIM13O60858 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.92□□□□□ -1.94
TRIM13O60858 AL365205.2-201ENST00000594586 68 ntBASIC2.92□□□□□ -1.94
TRIM13O60858 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM13O60858 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM13O60858 MIR1245B-201ENST00000636115 69 ntBASIC2.92□□□□□ -1.94
TRIM13O60858 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM13O60858 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM13O60858 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM13O60858 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
TRIM13O60858 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.92□□□□□ -1.94
TRIM13O60858 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM13O60858 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM13O60858 MIR22-201ENST00000362190 85 ntBASIC2.91□□□□□ -1.94
TRIM13O60858 RNU6-1083P-201ENST00000384022 107 ntBASIC2.91□□□□□ -1.94
TRIM13O60858 SNORA12-201ENST00000391162 147 ntBASIC2.91□□□□□ -1.94
TRIM13O60858 AF228730.3-201ENST00000436691 102 ntBASIC2.91□□□□□ -1.94
TRIM13O60858 AC010598.1-201ENST00000510378 103 ntBASIC2.91□□□□□ -1.94
TRIM13O60858 RNA5SP236-201ENST00000516169 116 ntBASIC2.91□□□□□ -1.94
TRIM13O60858 RNU6-56P-201ENST00000516986 93 ntBASIC2.91□□□□□ -1.94
TRIM13O60858 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.91□□□□□ -1.94
TRIM13O60858 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.91□□□□□ -1.94
TRIM13O60858 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM13O60858 RNU6-94P-201ENST00000607728 107 ntBASIC2.91□□□□□ -1.94
TRIM13O60858 UCA1.1-201ENST00000620952 75 ntBASIC2.91□□□□□ -1.94
TRIM13O60858 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.91□□□□□ -1.94
TRIM13O60858 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM13O60858 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TRIM13O60858 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
TRIM13O60858 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TRIM13O60858 RNU6-1014P-201ENST00000383940 103 ntBASIC2.9□□□□□ -1.95
TRIM13O60858 SNORA26-201ENST00000391286 122 ntBASIC2.9□□□□□ -1.95
TRIM13O60858 RNA5SP136-201ENST00000410906 107 ntBASIC2.9□□□□□ -1.95
TRIM13O60858 AC097463.2-201ENST00000421074 142 ntBASIC2.9□□□□□ -1.95
TRIM13O60858 SNORD65B-201ENST00000459126 73 ntBASIC2.9□□□□□ -1.95
TRIM13O60858 AC010531.2-201ENST00000465012 153 ntBASIC2.9□□□□□ -1.95
TRIM13O60858 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.9□□□□□ -1.95
TRIM13O60858 RNU6-63P-201ENST00000516690 95 ntBASIC2.9□□□□□ -1.95
TRIM13O60858 AC025647.1-201ENST00000517879 253 ntBASIC2.9□□□□□ -1.95
TRIM13O60858 AC007751.1-201ENST00000529260 376 ntBASIC2.9□□□□□ -1.95
TRIM13O60858 AC007536.1-201ENST00000533382 349 ntBASIC2.9□□□□□ -1.95
TRIM13O60858 AL929325.1-201ENST00000603096 117 ntBASIC2.9□□□□□ -1.95
TRIM13O60858 AC090115.4-201ENST00000609970 188 ntBASIC2.9□□□□□ -1.95
TRIM13O60858 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TRIM13O60858 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM13O60858 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
TRIM13O60858 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM13O60858 Y_RNA.323-201ENST00000365157 109 ntBASIC2.89□□□□□ -1.95
TRIM13O60858 Y_RNA.544-201ENST00000384650 113 ntBASIC2.89□□□□□ -1.95
TRIM13O60858 YME1L1P1-201ENST00000429435 297 ntBASIC2.89□□□□□ -1.95
TRIM13O60858 Z98742.2-201ENST00000431564 187 ntBASIC2.89□□□□□ -1.95
TRIM13O60858 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.89□□□□□ -1.95
TRIM13O60858 SNORD11-201ENST00000459124 84 ntBASIC2.89□□□□□ -1.95
TRIM13O60858 AC091153.1-201ENST00000466297 402 ntBASIC2.89□□□□□ -1.95
TRIM13O60858 RPL39P34-201ENST00000477141 156 ntBASIC2.89□□□□□ -1.95
TRIM13O60858 RNA5SP112-201ENST00000515937 99 ntBASIC2.89□□□□□ -1.95
TRIM13O60858 RNA5SP20-201ENST00000515976 84 ntBASIC2.89□□□□□ -1.95
TRIM13O60858 RNU6-970P-201ENST00000516312 107 ntBASIC2.89□□□□□ -1.95
TRIM13O60858 RNA5SP281-201ENST00000516504 135 ntBASIC2.89□□□□□ -1.95
TRIM13O60858 AC015720.1-201ENST00000565251 277 ntBASIC2.89□□□□□ -1.95
TRIM13O60858 RPL23AP91-201ENST00000569211 455 ntBASIC2.89□□□□□ -1.95
TRIM13O60858 MIR4765-201ENST00000585007 77 ntBASIC2.89□□□□□ -1.95
TRIM13O60858 AL442128.1-201ENST00000615151 90 ntBASIC2.89□□□□□ -1.95
TRIM13O60858 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.89□□□□□ -1.95
TRIM13O60858 AL035470.1-201ENST00000622571 220 ntBASIC2.89□□□□□ -1.95
TRIM13O60858 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM13O60858 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM13O60858 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM13O60858 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
TRIM13O60858 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.88□□□□□ -1.95
TRIM13O60858 snoU2_19.1-201ENST00000362361 80 ntBASIC2.88□□□□□ -1.95
TRIM13O60858 Y_RNA.66-201ENST00000362862 102 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms