Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RNU6-324P-201ENST00000363957 106 ntBASIC2.39□□□□□ -2.03
CTNND1O60716 Y_RNA.361-201ENST00000365515 120 ntBASIC2.39□□□□□ -2.03
CTNND1O60716 MIR515-2-201ENST00000384883 83 ntBASIC2.39□□□□□ -2.03
CTNND1O60716 MIR515-1-201ENST00000384884 83 ntBASIC2.39□□□□□ -2.03
CTNND1O60716 MIR873-201ENST00000401120 77 ntBASIC2.39□□□□□ -2.03
CTNND1O60716 AL031003.1-201ENST00000404229 172 ntBASIC2.39□□□□□ -2.03
CTNND1O60716 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.39□□□□□ -2.03
CTNND1O60716 Y_RNA.602-201ENST00000410535 92 ntBASIC2.39□□□□□ -2.03
CTNND1O60716 CYCSP49-201ENST00000420810 319 ntBASIC2.39□□□□□ -2.03
CTNND1O60716 RPS27P22-201ENST00000478056 241 ntBASIC2.39□□□□□ -2.03
CTNND1O60716 AC098869.1-201ENST00000481627 292 ntBASIC2.39□□□□□ -2.03
CTNND1O60716 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.39□□□□□ -2.03
CTNND1O60716 HMGB3P17-201ENST00000504195 649 ntBASIC2.39□□□□□ -2.03
CTNND1O60716 SNORA70.12-201ENST00000516084 153 ntBASIC2.39□□□□□ -2.03
CTNND1O60716 RNA5SP458-201ENST00000516188 119 ntBASIC2.39□□□□□ -2.03
CTNND1O60716 RNVU1-2-201ENST00000516326 135 ntBASIC2.39□□□□□ -2.03
CTNND1O60716 AP003733.2-201ENST00000529409 171 ntBASIC2.39□□□□□ -2.03
CTNND1O60716 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.39□□□□□ -2.03
CTNND1O60716 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.39□□□□□ -2.03
CTNND1O60716 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CTNND1O60716 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.39□□□□□ -2.03
CTNND1O60716 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.38□□□□□ -2.03
CTNND1O60716 Y_RNA.26-201ENST00000362539 101 ntBASIC2.38□□□□□ -2.03
CTNND1O60716 SNORD81.1-201ENST00000363064 77 ntBASIC2.38□□□□□ -2.03
CTNND1O60716 RNU6-238P-201ENST00000363313 106 ntBASIC2.38□□□□□ -2.03
CTNND1O60716 Y_RNA.222-201ENST00000364264 102 ntBASIC2.38□□□□□ -2.03
CTNND1O60716 SNORA16B-201ENST00000364674 135 ntBASIC2.38□□□□□ -2.03
CTNND1O60716 RNU6-1105P-201ENST00000384774 107 ntBASIC2.38□□□□□ -2.03
CTNND1O60716 MIR583-201ENST00000384846 75 ntBASIC2.38□□□□□ -2.03
CTNND1O60716 RNA5SP467-201ENST00000391274 118 ntBASIC2.38□□□□□ -2.03
CTNND1O60716 AC096920.1-201ENST00000423991 241 ntBASIC2.38□□□□□ -2.03
CTNND1O60716 AC104435.1-201ENST00000483483 166 ntBASIC2.38□□□□□ -2.03
CTNND1O60716 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.38□□□□□ -2.03
CTNND1O60716 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.38□□□□□ -2.03
CTNND1O60716 RNA5SP20-201ENST00000515976 84 ntBASIC2.38□□□□□ -2.03
CTNND1O60716 RNU6-496P-201ENST00000516145 99 ntBASIC2.38□□□□□ -2.03
CTNND1O60716 IGLV3-17-201ENST00000519099 244 ntBASIC2.38□□□□□ -2.03
CTNND1O60716 MIR5694-201ENST00000581190 76 ntBASIC2.38□□□□□ -2.03
CTNND1O60716 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CTNND1O60716 RNU4-90P-201ENST00000362773 141 ntBASIC2.37□□□□□ -2.03
CTNND1O60716 Y_RNA.286-201ENST00000364813 102 ntBASIC2.37□□□□□ -2.03
CTNND1O60716 RNU6-407P-201ENST00000365280 104 ntBASIC2.37□□□□□ -2.03
CTNND1O60716 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.37□□□□□ -2.03
CTNND1O60716 Y_RNA.574-201ENST00000384766 95 ntBASIC2.37□□□□□ -2.03
CTNND1O60716 Y_RNA.581-201ENST00000391017 97 ntBASIC2.37□□□□□ -2.03
CTNND1O60716 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.37□□□□□ -2.03
CTNND1O60716 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.37□□□□□ -2.03
CTNND1O60716 MRPS10P1-201ENST00000448483 130 ntBASIC2.37□□□□□ -2.03
CTNND1O60716 RNU1-142P-201ENST00000516682 145 ntBASIC2.37□□□□□ -2.03
CTNND1O60716 AC024995.1-201ENST00000523014 93 ntBASIC2.37□□□□□ -2.03
CTNND1O60716 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.37□□□□□ -2.03
CTNND1O60716 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.37□□□□□ -2.03
CTNND1O60716 AC023157.2-201ENST00000540596 141 ntBASIC2.37□□□□□ -2.03
CTNND1O60716 MIR5094-201ENST00000578766 85 ntBASIC2.37□□□□□ -2.03
CTNND1O60716 MIR4438-201ENST00000585271 93 ntBASIC2.37□□□□□ -2.03
CTNND1O60716 AL359075.3-201ENST00000613288 217 ntBASIC2.37□□□□□ -2.03
CTNND1O60716 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.37□□□□□ -2.03
CTNND1O60716 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CTNND1O60716 ZNF702P-202ENST00000434269 1966 ntBASIC2.36□□□□□ -2.03
CTNND1O60716 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CTNND1O60716 snoU2_19.2-201ENST00000363024 80 ntBASIC2.36□□□□□ -2.03
CTNND1O60716 RNU6-1309P-201ENST00000363305 108 ntBASIC2.36□□□□□ -2.03
CTNND1O60716 Y_RNA.329-201ENST00000365209 107 ntBASIC2.36□□□□□ -2.03
CTNND1O60716 RNU6-713P-201ENST00000384761 107 ntBASIC2.36□□□□□ -2.03
CTNND1O60716 RPL21P38-201ENST00000418090 167 ntBASIC2.36□□□□□ -2.03
CTNND1O60716 RPL23AP7-203ENST00000449021 469 ntBASIC2.36□□□□□ -2.03
CTNND1O60716 RPL23AP3-201ENST00000453844 468 ntBASIC2.36□□□□□ -2.03
CTNND1O60716 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.36□□□□□ -2.03
CTNND1O60716 RNU7-99P-201ENST00000516271 62 ntBASIC2.36□□□□□ -2.03
CTNND1O60716 MIR5002-201ENST00000584713 97 ntBASIC2.36□□□□□ -2.03
CTNND1O60716 MIR6840-201ENST00000611937 71 ntBASIC2.36□□□□□ -2.03
CTNND1O60716 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
CTNND1O60716 AC008555.8-201ENST00000623602 2168 ntBASIC2.36□□□□□ -2.03
CTNND1O60716 AC010615.1-201ENST00000594254 1764 ntBASIC2.36□□□□□ -2.03
CTNND1O60716 Y_RNA.47-201ENST00000362697 108 ntBASIC2.35□□□□□ -2.03
CTNND1O60716 Y_RNA.133-201ENST00000363428 110 ntBASIC2.35□□□□□ -2.03
CTNND1O60716 RNU6-1019P-201ENST00000364424 107 ntBASIC2.35□□□□□ -2.03
CTNND1O60716 Y_RNA.383-201ENST00000383855 97 ntBASIC2.35□□□□□ -2.03
CTNND1O60716 MIR215-201ENST00000384858 110 ntBASIC2.35□□□□□ -2.03
CTNND1O60716 RNA5SP323-201ENST00000391094 133 ntBASIC2.35□□□□□ -2.03
CTNND1O60716 RNU6-1186P-201ENST00000410429 97 ntBASIC2.35□□□□□ -2.03
CTNND1O60716 AC010154.1-201ENST00000425857 269 ntBASIC2.35□□□□□ -2.03
CTNND1O60716 POLR2KP2-201ENST00000438155 177 ntBASIC2.35□□□□□ -2.03
CTNND1O60716 HSPE1P25-201ENST00000455484 251 ntBASIC2.35□□□□□ -2.03
CTNND1O60716 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.35□□□□□ -2.03
CTNND1O60716 AC110588.1-201ENST00000559699 137 ntBASIC2.35□□□□□ -2.03
CTNND1O60716 SUB1P4-201ENST00000566062 339 ntBASIC2.35□□□□□ -2.03
CTNND1O60716 AC069114.2-201ENST00000604699 304 ntBASIC2.35□□□□□ -2.03
CTNND1O60716 RNA5SP276-201ENST00000362580 94 ntBASIC2.34□□□□□ -2.03
CTNND1O60716 Y_RNA.124-201ENST00000363339 93 ntBASIC2.34□□□□□ -2.03
CTNND1O60716 Y_RNA.149-201ENST00000363558 117 ntBASIC2.34□□□□□ -2.03
CTNND1O60716 RNU6-505P-201ENST00000384427 107 ntBASIC2.34□□□□□ -2.03
CTNND1O60716 RNU6-102P-201ENST00000384485 104 ntBASIC2.34□□□□□ -2.03
CTNND1O60716 RNU2-61P-201ENST00000411069 191 ntBASIC2.34□□□□□ -2.03
CTNND1O60716 EBAG9P1-201ENST00000418955 543 ntBASIC2.34□□□□□ -2.03
CTNND1O60716 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.34□□□□□ -2.03
CTNND1O60716 RPS26P55-201ENST00000471178 356 ntBASIC2.34□□□□□ -2.03
CTNND1O60716 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.34□□□□□ -2.03
CTNND1O60716 AC084364.2-201ENST00000546924 395 ntBASIC2.34□□□□□ -2.03
CTNND1O60716 AC005034.5-201ENST00000604219 466 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms