Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 Y_RNA.231-201ENST00000364358 102 ntBASIC0.32□□□□□ -2.36
GMDSO60547 RNU4-41P-201ENST00000364426 143 ntBASIC0.32□□□□□ -2.36
GMDSO60547 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.32□□□□□ -2.36
GMDSO60547 RNU6-1264P-201ENST00000383891 107 ntBASIC0.32□□□□□ -2.36
GMDSO60547 RNU6-1105P-201ENST00000384774 107 ntBASIC0.32□□□□□ -2.36
GMDSO60547 MIR520C-201ENST00000385005 87 ntBASIC0.32□□□□□ -2.36
GMDSO60547 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.32□□□□□ -2.36
GMDSO60547 RNA5SP222-201ENST00000411039 105 ntBASIC0.32□□□□□ -2.36
GMDSO60547 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.32□□□□□ -2.36
GMDSO60547 MTCO2P12-201ENST00000427426 682 ntBASIC0.32□□□□□ -2.36
GMDSO60547 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.32□□□□□ -2.36
GMDSO60547 RPS20P10-201ENST00000451209 253 ntBASIC0.32□□□□□ -2.36
GMDSO60547 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.32□□□□□ -2.36
GMDSO60547 RNU6-405P-201ENST00000516637 110 ntBASIC0.32□□□□□ -2.36
GMDSO60547 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.32□□□□□ -2.36
GMDSO60547 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.32□□□□□ -2.36
GMDSO60547 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.32□□□□□ -2.36
GMDSO60547 AC073114.1-201ENST00000612027 490 ntBASIC0.32□□□□□ -2.36
GMDSO60547 AC243829.6-201ENST00000612652 106 ntBASIC0.32□□□□□ -2.36
GMDSO60547 RMST_2.1-201ENST00000617263 136 ntBASIC0.32□□□□□ -2.36
GMDSO60547 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
GMDSO60547 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
GMDSO60547 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
GMDSO60547 MTND5P16-201ENST00000460269 1703 ntBASIC0.31□□□□□ -2.36
GMDSO60547 AC090625.1-201ENST00000357130 210 ntBASIC0.31□□□□□ -2.36
GMDSO60547 Y_RNA.354-201ENST00000365448 111 ntBASIC0.31□□□□□ -2.36
GMDSO60547 SNORA36.2-201ENST00000384004 127 ntBASIC0.31□□□□□ -2.36
GMDSO60547 MIR936-201ENST00000401264 98 ntBASIC0.31□□□□□ -2.36
GMDSO60547 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.31□□□□□ -2.36
GMDSO60547 PIGPP3-201ENST00000425307 415 ntBASIC0.31□□□□□ -2.36
GMDSO60547 AL137792.2-201ENST00000443484 235 ntBASIC0.31□□□□□ -2.36
GMDSO60547 RNU6-956P-201ENST00000458868 103 ntBASIC0.31□□□□□ -2.36
GMDSO60547 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.31□□□□□ -2.36
GMDSO60547 SNORA74.3-201ENST00000517108 154 ntBASIC0.31□□□□□ -2.36
GMDSO60547 MIR4711-201ENST00000578274 70 ntBASIC0.31□□□□□ -2.36
GMDSO60547 AC022709.1-201ENST00000615967 87 ntBASIC0.31□□□□□ -2.36
GMDSO60547 AC127459.3-201ENST00000624328 466 ntBASIC0.31□□□□□ -2.36
GMDSO60547 AC100810.6-201ENST00000638068 285 ntBASIC0.31□□□□□ -2.36
GMDSO60547 MIR517A-201ENST00000385001 87 ntBASIC0.3□□□□□ -2.36
GMDSO60547 ERLEC1P1-201ENST00000433806 578 ntBASIC0.3□□□□□ -2.36
GMDSO60547 PCNPP5-201ENST00000452246 481 ntBASIC0.3□□□□□ -2.36
GMDSO60547 AC083904.1-201ENST00000487828 231 ntBASIC0.3□□□□□ -2.36
GMDSO60547 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
GMDSO60547 RNU7-41P-201ENST00000515917 61 ntBASIC0.3□□□□□ -2.36
GMDSO60547 RNU6-1114P-201ENST00000516022 107 ntBASIC0.3□□□□□ -2.36
GMDSO60547 AC023442.1-201ENST00000531247 422 ntBASIC0.3□□□□□ -2.36
GMDSO60547 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.3□□□□□ -2.36
GMDSO60547 MIR5696-201ENST00000578474 85 ntBASIC0.3□□□□□ -2.36
GMDSO60547 AC092954.2-201ENST00000609103 430 ntBASIC0.3□□□□□ -2.36
GMDSO60547 AC019193.3-201ENST00000609144 554 ntBASIC0.3□□□□□ -2.36
GMDSO60547 SNORD14.1-201ENST00000365609 90 ntBASIC0.29□□□□□ -2.36
GMDSO60547 Y_RNA.490-201ENST00000384413 102 ntBASIC0.29□□□□□ -2.36
GMDSO60547 MIR136-201ENST00000385207 82 ntBASIC0.29□□□□□ -2.36
GMDSO60547 SNORD105-201ENST00000386910 85 ntBASIC0.29□□□□□ -2.36
GMDSO60547 Y_RNA.582-201ENST00000391023 95 ntBASIC0.29□□□□□ -2.36
GMDSO60547 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.29□□□□□ -2.36
GMDSO60547 AC243428.1-201ENST00000421099 264 ntBASIC0.29□□□□□ -2.36
GMDSO60547 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.29□□□□□ -2.36
GMDSO60547 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.29□□□□□ -2.36
GMDSO60547 RNU6-1132P-201ENST00000459214 107 ntBASIC0.29□□□□□ -2.36
GMDSO60547 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
GMDSO60547 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
GMDSO60547 RNU7-43P-201ENST00000516554 64 ntBASIC0.29□□□□□ -2.36
GMDSO60547 RNU6-1096P-201ENST00000517089 102 ntBASIC0.29□□□□□ -2.36
GMDSO60547 AL158211.1-201ENST00000566763 763 ntBASIC0.29□□□□□ -2.36
GMDSO60547 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.29□□□□□ -2.36
GMDSO60547 AC124303.1-201ENST00000605703 360 ntBASIC0.29□□□□□ -2.36
GMDSO60547 RNU6-89P-201ENST00000606519 100 ntBASIC0.29□□□□□ -2.36
GMDSO60547 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.29□□□□□ -2.36
GMDSO60547 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.29□□□□□ -2.36
GMDSO60547 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.28□□□□□ -2.36
GMDSO60547 RNU6-522P-201ENST00000364497 107 ntBASIC0.28□□□□□ -2.36
GMDSO60547 SNORD113.3-201ENST00000364630 78 ntBASIC0.28□□□□□ -2.36
GMDSO60547 VTRNA1-3-201ENST00000365645 89 ntBASIC0.28□□□□□ -2.36
GMDSO60547 SNORA75-201ENST00000384158 137 ntBASIC0.28□□□□□ -2.36
GMDSO60547 RNU6-95P-201ENST00000384697 107 ntBASIC0.28□□□□□ -2.36
GMDSO60547 RNU1-139P-201ENST00000391307 165 ntBASIC0.28□□□□□ -2.36
GMDSO60547 MIR873-201ENST00000401120 77 ntBASIC0.28□□□□□ -2.36
GMDSO60547 RNU6-648P-201ENST00000410190 107 ntBASIC0.28□□□□□ -2.36
GMDSO60547 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.28□□□□□ -2.36
GMDSO60547 AC092447.3-201ENST00000426027 686 ntBASIC0.28□□□□□ -2.36
GMDSO60547 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.28□□□□□ -2.36
GMDSO60547 RN7SKP164-201ENST00000516138 266 ntBASIC0.28□□□□□ -2.36
GMDSO60547 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.28□□□□□ -2.36
GMDSO60547 AF235103.2-201ENST00000525753 346 ntBASIC0.28□□□□□ -2.36
GMDSO60547 AC036111.3-201ENST00000526389 112 ntBASIC0.28□□□□□ -2.36
GMDSO60547 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.28□□□□□ -2.36
GMDSO60547 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.28□□□□□ -2.36
GMDSO60547 AL589743.1-201ENST00000551932 2712 ntBASIC0.27□□□□□ -2.37
GMDSO60547 SNORD114-7-201ENST00000362520 77 ntBASIC0.27□□□□□ -2.37
GMDSO60547 SNORD68-201ENST00000363214 84 ntBASIC0.27□□□□□ -2.37
GMDSO60547 Y_RNA.122-201ENST00000363331 96 ntBASIC0.27□□□□□ -2.37
GMDSO60547 RNU6-281P-201ENST00000384212 103 ntBASIC0.27□□□□□ -2.37
GMDSO60547 RNU6-342P-201ENST00000384521 104 ntBASIC0.27□□□□□ -2.37
GMDSO60547 MIR1827-201ENST00000408549 66 ntBASIC0.27□□□□□ -2.37
GMDSO60547 MIR1298-201ENST00000408783 112 ntBASIC0.27□□□□□ -2.37
GMDSO60547 RNA5SP193-201ENST00000410353 107 ntBASIC0.27□□□□□ -2.37
GMDSO60547 AL590632.1-201ENST00000424289 371 ntBASIC0.27□□□□□ -2.37
GMDSO60547 USP9YP16-201ENST00000430287 407 ntBASIC0.27□□□□□ -2.37
GMDSO60547 UQCRBP2-201ENST00000447827 297 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms