Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.07□□□□□ -2.08
LDB2O43679 AC245102.2-201ENST00000448956 180 ntBASIC2.07□□□□□ -2.08
LDB2O43679 AC091959.1-201ENST00000495857 238 ntBASIC2.07□□□□□ -2.08
LDB2O43679 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LDB2O43679 AC010598.1-201ENST00000510378 103 ntBASIC2.07□□□□□ -2.08
LDB2O43679 SNORA70.12-201ENST00000516084 153 ntBASIC2.07□□□□□ -2.08
LDB2O43679 Y_RNA.673-201ENST00000516306 88 ntBASIC2.07□□□□□ -2.08
LDB2O43679 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.07□□□□□ -2.08
LDB2O43679 AC026271.5-201ENST00000577873 130 ntBASIC2.07□□□□□ -2.08
LDB2O43679 MIR3145-201ENST00000580727 82 ntBASIC2.07□□□□□ -2.08
LDB2O43679 AC012640.5-201ENST00000623897 319 ntBASIC2.07□□□□□ -2.08
LDB2O43679 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
LDB2O43679 UBE2WP1-201ENST00000362030 340 ntBASIC2.06□□□□□ -2.08
LDB2O43679 RNA5SP160-201ENST00000364866 120 ntBASIC2.06□□□□□ -2.08
LDB2O43679 RNU6-1240P-201ENST00000365155 104 ntBASIC2.06□□□□□ -2.08
LDB2O43679 SNORA20B-201ENST00000384220 132 ntBASIC2.06□□□□□ -2.08
LDB2O43679 MIR873-201ENST00000401120 77 ntBASIC2.06□□□□□ -2.08
LDB2O43679 AL355796.1-201ENST00000406706 323 ntBASIC2.06□□□□□ -2.08
LDB2O43679 MIR1289-2-201ENST00000408360 111 ntBASIC2.06□□□□□ -2.08
LDB2O43679 RNU2-61P-201ENST00000411069 191 ntBASIC2.06□□□□□ -2.08
LDB2O43679 AC016909.1-201ENST00000415916 166 ntBASIC2.06□□□□□ -2.08
LDB2O43679 RPL23AP7-203ENST00000449021 469 ntBASIC2.06□□□□□ -2.08
LDB2O43679 AL021397.1-201ENST00000451806 248 ntBASIC2.06□□□□□ -2.08
LDB2O43679 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.06□□□□□ -2.08
LDB2O43679 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.06□□□□□ -2.08
LDB2O43679 RNU1-131P-201ENST00000458943 161 ntBASIC2.06□□□□□ -2.08
LDB2O43679 SNORD65B-201ENST00000459126 73 ntBASIC2.06□□□□□ -2.08
LDB2O43679 AC025033.1-201ENST00000463883 194 ntBASIC2.06□□□□□ -2.08
LDB2O43679 RNU6-191P-201ENST00000516295 94 ntBASIC2.06□□□□□ -2.08
LDB2O43679 RPL21P9-201ENST00000556149 474 ntBASIC2.06□□□□□ -2.08
LDB2O43679 AL512605.2-201ENST00000592972 256 ntBASIC2.06□□□□□ -2.08
LDB2O43679 BX284668.6-201ENST00000606899 438 ntBASIC2.06□□□□□ -2.08
LDB2O43679 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.06□□□□□ -2.08
LDB2O43679 AC006435.5-201ENST00000624486 112 ntBASIC2.06□□□□□ -2.08
LDB2O43679 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.06□□□□□ -2.08
LDB2O43679 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
LDB2O43679 SNORD114-1-201ENST00000362705 72 ntBASIC2.05□□□□□ -2.08
LDB2O43679 Y_RNA.54-201ENST00000362766 105 ntBASIC2.05□□□□□ -2.08
LDB2O43679 RNU6-271P-201ENST00000363858 105 ntBASIC2.05□□□□□ -2.08
LDB2O43679 SNORD27-201ENST00000363981 72 ntBASIC2.05□□□□□ -2.08
LDB2O43679 Y_RNA.275-201ENST00000364726 110 ntBASIC2.05□□□□□ -2.08
LDB2O43679 SNORA6-201ENST00000384033 151 ntBASIC2.05□□□□□ -2.08
LDB2O43679 RNU6-160P-201ENST00000384591 107 ntBASIC2.05□□□□□ -2.08
LDB2O43679 RNU6-710P-201ENST00000410424 105 ntBASIC2.05□□□□□ -2.08
LDB2O43679 RNU6-847P-201ENST00000411115 108 ntBASIC2.05□□□□□ -2.08
LDB2O43679 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.05□□□□□ -2.08
LDB2O43679 SNORA27.4-201ENST00000516650 95 ntBASIC2.05□□□□□ -2.08
LDB2O43679 MIR3126-201ENST00000577443 74 ntBASIC2.05□□□□□ -2.08
LDB2O43679 AC005357.1-201ENST00000588399 301 ntBASIC2.05□□□□□ -2.08
LDB2O43679 AC010900.2-201ENST00000604508 210 ntBASIC2.05□□□□□ -2.08
LDB2O43679 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.05□□□□□ -2.08
LDB2O43679 MIR219B-201ENST00000637023 88 ntBASIC2.05□□□□□ -2.08
LDB2O43679 AC131280.1-202ENST00000624067 4211 ntBASIC2.04□□□□□ -2.08
LDB2O43679 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LDB2O43679 RNA5SP432-201ENST00000362480 116 ntBASIC2.04□□□□□ -2.08
LDB2O43679 SNORA27.1-201ENST00000362604 124 ntBASIC2.04□□□□□ -2.08
LDB2O43679 Y_RNA.277-201ENST00000364754 102 ntBASIC2.04□□□□□ -2.08
LDB2O43679 RNA5SP37-201ENST00000365420 130 ntBASIC2.04□□□□□ -2.08
LDB2O43679 SNORD58.1-201ENST00000391313 66 ntBASIC2.04□□□□□ -2.08
LDB2O43679 SNORD23.1-201ENST00000408212 104 ntBASIC2.04□□□□□ -2.08
LDB2O43679 RNU2-2P-201ENST00000410396 191 ntBASIC2.04□□□□□ -2.08
LDB2O43679 HMGN2P3-201ENST00000433603 273 ntBASIC2.04□□□□□ -2.08
LDB2O43679 HMGN2P5-201ENST00000436882 273 ntBASIC2.04□□□□□ -2.08
LDB2O43679 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.04□□□□□ -2.08
LDB2O43679 RNU6-717P-201ENST00000459076 104 ntBASIC2.04□□□□□ -2.08
LDB2O43679 AC090255.1-201ENST00000495779 349 ntBASIC2.04□□□□□ -2.08
LDB2O43679 RNU6-388P-201ENST00000517012 105 ntBASIC2.04□□□□□ -2.08
LDB2O43679 RNU6-389P-201ENST00000517048 105 ntBASIC2.04□□□□□ -2.08
LDB2O43679 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.04□□□□□ -2.08
LDB2O43679 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.04□□□□□ -2.08
LDB2O43679 MIR4524B-201ENST00000581569 115 ntBASIC2.04□□□□□ -2.08
LDB2O43679 U2.15-201ENST00000611544 191 ntBASIC2.04□□□□□ -2.08
LDB2O43679 U2.16-201ENST00000613119 191 ntBASIC2.04□□□□□ -2.08
LDB2O43679 U2.12-201ENST00000613778 191 ntBASIC2.04□□□□□ -2.08
LDB2O43679 U2.20-201ENST00000613956 192 ntBASIC2.04□□□□□ -2.08
LDB2O43679 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.04□□□□□ -2.08
LDB2O43679 U2.9-201ENST00000615427 191 ntBASIC2.04□□□□□ -2.08
LDB2O43679 U2.11-201ENST00000616345 191 ntBASIC2.04□□□□□ -2.08
LDB2O43679 U2.2-201ENST00000616535 191 ntBASIC2.04□□□□□ -2.08
LDB2O43679 U2.3-201ENST00000617785 191 ntBASIC2.04□□□□□ -2.08
LDB2O43679 U2.19-201ENST00000618602 191 ntBASIC2.04□□□□□ -2.08
LDB2O43679 RNU2-1-201ENST00000618664 191 ntBASIC2.04□□□□□ -2.08
LDB2O43679 U2.6-201ENST00000619225 191 ntBASIC2.04□□□□□ -2.08
LDB2O43679 U2.5-201ENST00000619465 191 ntBASIC2.04□□□□□ -2.08
LDB2O43679 U2.10-201ENST00000620268 191 ntBASIC2.04□□□□□ -2.08
LDB2O43679 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LDB2O43679 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
LDB2O43679 Y_RNA.539-201ENST00000384635 107 ntBASIC2.03□□□□□ -2.08
LDB2O43679 Y_RNA.552-201ENST00000384665 112 ntBASIC2.03□□□□□ -2.08
LDB2O43679 MIR29C-201ENST00000385231 88 ntBASIC2.03□□□□□ -2.08
LDB2O43679 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.03□□□□□ -2.08
LDB2O43679 AC060773.1-201ENST00000421698 310 ntBASIC2.03□□□□□ -2.08
LDB2O43679 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.03□□□□□ -2.08
LDB2O43679 AL445646.1-201ENST00000431784 216 ntBASIC2.03□□□□□ -2.08
LDB2O43679 AL353689.1-201ENST00000438895 199 ntBASIC2.03□□□□□ -2.08
LDB2O43679 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.03□□□□□ -2.08
LDB2O43679 AL162424.1-201ENST00000602325 221 ntBASIC2.03□□□□□ -2.08
LDB2O43679 Y_RNA.783-201ENST00000613546 102 ntBASIC2.03□□□□□ -2.08
LDB2O43679 AP000553.5-201ENST00000641933 54 ntBASIC2.03□□□□□ -2.08
LDB2O43679 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.03□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms