Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 AL606517.2-201ENST00000442855 241 ntBASIC1.63□□□□□ -2.15
XRCC3O43542 snoU13.27-201ENST00000459278 104 ntBASIC1.63□□□□□ -2.15
XRCC3O43542 RNU7-94P-201ENST00000459576 63 ntBASIC1.63□□□□□ -2.15
XRCC3O43542 AL163540.1-201ENST00000485382 386 ntBASIC1.63□□□□□ -2.15
XRCC3O43542 SNORA44.1-201ENST00000517031 108 ntBASIC1.63□□□□□ -2.15
XRCC3O43542 AC022616.4-201ENST00000522985 181 ntBASIC1.63□□□□□ -2.15
XRCC3O43542 MIR3122-201ENST00000577243 73 ntBASIC1.63□□□□□ -2.15
XRCC3O43542 AC024614.2-201ENST00000577584 372 ntBASIC1.63□□□□□ -2.15
XRCC3O43542 MIR3171-201ENST00000584270 74 ntBASIC1.63□□□□□ -2.15
XRCC3O43542 MIR8074-201ENST00000615081 81 ntBASIC1.63□□□□□ -2.15
XRCC3O43542 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
XRCC3O43542 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
XRCC3O43542 Y_RNA.124-201ENST00000363339 93 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 RNU6-414P-201ENST00000363705 104 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 SNORA22B-201ENST00000383876 138 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 Y_RNA.439-201ENST00000384119 94 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 Y_RNA.551-201ENST00000384661 102 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 MIR30A-201ENST00000385092 71 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
XRCC3O43542 MIR764-201ENST00000390811 85 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 RNU11-5P-201ENST00000391216 129 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 RPL21P1-201ENST00000399532 476 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 RNU5A-5P-201ENST00000411054 116 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.62□□□□□ -2.15
XRCC3O43542 AL390729.2-201ENST00000416137 156 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 AC010154.1-201ENST00000425857 269 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 MTCYBP6-201ENST00000441810 138 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 HMGN2P23-201ENST00000456759 269 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 RPS26P55-201ENST00000471178 356 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.62□□□□□ -2.15
XRCC3O43542 SNORA70.12-201ENST00000516084 153 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 RNU6-155P-201ENST00000516347 100 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 RNU6-548P-201ENST00000517083 115 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.62□□□□□ -2.15
XRCC3O43542 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.62□□□□□ -2.15
XRCC3O43542 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.62□□□□□ -2.15
XRCC3O43542 AC104695.3-201ENST00000604052 296 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 AL021879.1-201ENST00000611756 288 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 AC018630.2-201ENST00000534866 2403 ntBASIC1.62□□□□□ -2.15
XRCC3O43542 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
XRCC3O43542 RNU4-76P-201ENST00000364509 141 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 SNORA16.1-201ENST00000364597 132 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 RNU6-1175P-201ENST00000365200 107 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 SNORA4.2-201ENST00000365313 147 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 RNU6-117P-201ENST00000365415 107 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 SNORA63.7-201ENST00000365579 123 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 SNORD63-201ENST00000384262 68 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 Y_RNA.471-201ENST00000384312 102 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 SNORA67.3-201ENST00000384366 140 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 RNU6-823P-201ENST00000391042 103 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 MRPL42P3-201ENST00000401492 326 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 AL031003.1-201ENST00000404229 172 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 RNU6-966P-201ENST00000516479 104 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 RPL21P9-201ENST00000556149 474 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 MIR3198-2-201ENST00000577868 80 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 AC073413.2-201ENST00000604332 360 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 AC124312.5-201ENST00000604451 268 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 AL353997.5-201ENST00000618886 171 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 AC127459.3-201ENST00000624328 466 ntBASIC1.61□□□□□ -2.15
XRCC3O43542 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.61□□□□□ -2.15
XRCC3O43542 SNORD114-1-201ENST00000362705 72 ntBASIC1.6□□□□□ -2.15
XRCC3O43542 RNU6-950P-201ENST00000384651 107 ntBASIC1.6□□□□□ -2.15
XRCC3O43542 RNU6-482P-201ENST00000391068 107 ntBASIC1.6□□□□□ -2.15
XRCC3O43542 RNU6-130P-201ENST00000411112 103 ntBASIC1.6□□□□□ -2.15
XRCC3O43542 COX6CP10-201ENST00000416832 224 ntBASIC1.6□□□□□ -2.15
XRCC3O43542 JTBP1-201ENST00000441314 247 ntBASIC1.6□□□□□ -2.15
XRCC3O43542 HSPE1P13-201ENST00000451143 297 ntBASIC1.6□□□□□ -2.15
XRCC3O43542 AC008834.1-201ENST00000511612 175 ntBASIC1.6□□□□□ -2.15
XRCC3O43542 RNU6-436P-201ENST00000516171 114 ntBASIC1.6□□□□□ -2.15
XRCC3O43542 SNORA31.10-201ENST00000516482 106 ntBASIC1.6□□□□□ -2.15
XRCC3O43542 Y_RNA.721-201ENST00000517207 102 ntBASIC1.6□□□□□ -2.15
XRCC3O43542 SNORA77B-201ENST00000578179 125 ntBASIC1.6□□□□□ -2.15
XRCC3O43542 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.6□□□□□ -2.15
XRCC3O43542 SNRPGP19-201ENST00000603826 189 ntBASIC1.6□□□□□ -2.15
XRCC3O43542 PART1_1.1-201ENST00000611761 217 ntBASIC1.6□□□□□ -2.15
XRCC3O43542 MIR8054-201ENST00000620877 86 ntBASIC1.6□□□□□ -2.15
XRCC3O43542 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.6□□□□□ -2.15
XRCC3O43542 WWP1P1-201ENST00000466609 2769 ntBASIC1.6□□□□□ -2.15
XRCC3O43542 AC117470.1-201ENST00000381974 330 ntBASIC1.59□□□□□ -2.15
XRCC3O43542 AL023284.1-201ENST00000403956 276 ntBASIC1.59□□□□□ -2.15
XRCC3O43542 RNU2-20P-201ENST00000410425 191 ntBASIC1.59□□□□□ -2.15
XRCC3O43542 AC245047.3-201ENST00000429428 127 ntBASIC1.59□□□□□ -2.15
XRCC3O43542 AL445646.1-201ENST00000431784 216 ntBASIC1.59□□□□□ -2.15
XRCC3O43542 AC005042.3-201ENST00000453230 174 ntBASIC1.59□□□□□ -2.15
XRCC3O43542 RNU6-1278P-201ENST00000516130 107 ntBASIC1.59□□□□□ -2.15
XRCC3O43542 Y_RNA.715-201ENST00000517082 110 ntBASIC1.59□□□□□ -2.15
XRCC3O43542 MIR4419B-201ENST00000577260 68 ntBASIC1.59□□□□□ -2.15
XRCC3O43542 MIR4709-201ENST00000577272 72 ntBASIC1.59□□□□□ -2.15
XRCC3O43542 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.59□□□□□ -2.15
XRCC3O43542 MIR6079-201ENST00000635807 62 ntBASIC1.59□□□□□ -2.15
XRCC3O43542 MIR219B-201ENST00000637023 88 ntBASIC1.59□□□□□ -2.15
XRCC3O43542 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
XRCC3O43542 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
XRCC3O43542 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
XRCC3O43542 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
XRCC3O43542 Y_RNA.140-201ENST00000363474 103 ntBASIC1.58□□□□□ -2.16
XRCC3O43542 Y_RNA.216-201ENST00000364205 93 ntBASIC1.58□□□□□ -2.16
XRCC3O43542 RNU6-1227P-201ENST00000383981 107 ntBASIC1.58□□□□□ -2.16
XRCC3O43542 RNU6-505P-201ENST00000384427 107 ntBASIC1.58□□□□□ -2.16
XRCC3O43542 MIR1267-201ENST00000408723 78 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms