Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.4□□□□□ -2.47
HMGB3O15347 MTCYBP4-201ENST00000401524 249 ntBASIC-0.4□□□□□ -2.47
HMGB3O15347 RNU6-325P-201ENST00000411132 105 ntBASIC-0.4□□□□□ -2.47
HMGB3O15347 AL606489.2-201ENST00000433886 234 ntBASIC-0.4□□□□□ -2.47
HMGB3O15347 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.4□□□□□ -2.47
HMGB3O15347 RNA5SP268-201ENST00000516828 124 ntBASIC-0.4□□□□□ -2.47
HMGB3O15347 AC090897.1-201ENST00000580909 226 ntBASIC-0.4□□□□□ -2.47
HMGB3O15347 AC020891.4-201ENST00000605745 93 ntBASIC-0.4□□□□□ -2.47
HMGB3O15347 AC022306.3-201ENST00000619930 550 ntBASIC-0.4□□□□□ -2.47
HMGB3O15347 AC127459.3-201ENST00000624328 466 ntBASIC-0.4□□□□□ -2.47
HMGB3O15347 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.41□□□□□ -2.48
HMGB3O15347 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.41□□□□□ -2.48
HMGB3O15347 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.41□□□□□ -2.48
HMGB3O15347 RNU4-9P-201ENST00000364951 139 ntBASIC-0.41□□□□□ -2.48
HMGB3O15347 RNA5SP128-201ENST00000365305 116 ntBASIC-0.41□□□□□ -2.48
HMGB3O15347 RNU6-517P-201ENST00000384362 110 ntBASIC-0.41□□□□□ -2.48
HMGB3O15347 RNU6-159P-201ENST00000391080 106 ntBASIC-0.41□□□□□ -2.48
HMGB3O15347 PCNPP3-201ENST00000393579 471 ntBASIC-0.41□□□□□ -2.48
HMGB3O15347 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.41□□□□□ -2.48
HMGB3O15347 AL356010.1-201ENST00000456364 102 ntBASIC-0.41□□□□□ -2.48
HMGB3O15347 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.41□□□□□ -2.48
HMGB3O15347 AL157687.1-201ENST00000554853 619 ntBASIC-0.41□□□□□ -2.48
HMGB3O15347 AL158050.2-201ENST00000605336 568 ntBASIC-0.41□□□□□ -2.48
HMGB3O15347 MIR8087-201ENST00000612745 78 ntBASIC-0.41□□□□□ -2.48
HMGB3O15347 AL357075.2-201ENST00000614906 189 ntBASIC-0.41□□□□□ -2.48
HMGB3O15347 AL591926.4-201ENST00000616895 298 ntBASIC-0.41□□□□□ -2.48
HMGB3O15347 MIR6755-201ENST00000619993 66 ntBASIC-0.41□□□□□ -2.48
HMGB3O15347 SNORD50.1-201ENST00000362987 71 ntBASIC-0.42□□□□□ -2.48
HMGB3O15347 RNU6-282P-201ENST00000365357 103 ntBASIC-0.42□□□□□ -2.48
HMGB3O15347 RNU6-456P-201ENST00000384493 107 ntBASIC-0.42□□□□□ -2.48
HMGB3O15347 RNY1P4-201ENST00000384595 115 ntBASIC-0.42□□□□□ -2.48
HMGB3O15347 MIR153-2-201ENST00000385225 87 ntBASIC-0.42□□□□□ -2.48
HMGB3O15347 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.42□□□□□ -2.48
HMGB3O15347 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.42□□□□□ -2.48
HMGB3O15347 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.42□□□□□ -2.48
HMGB3O15347 AC015818.7-201ENST00000428754 109 ntBASIC-0.42□□□□□ -2.48
HMGB3O15347 Z82188.1-201ENST00000436709 154 ntBASIC-0.42□□□□□ -2.48
HMGB3O15347 AC087499.7-201ENST00000441958 109 ntBASIC-0.42□□□□□ -2.48
HMGB3O15347 AC079354.2-201ENST00000453523 154 ntBASIC-0.42□□□□□ -2.48
HMGB3O15347 CCDC34P1-201ENST00000507441 517 ntBASIC-0.42□□□□□ -2.48
HMGB3O15347 AP002963.1-201ENST00000530590 184 ntBASIC-0.42□□□□□ -2.48
HMGB3O15347 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.42□□□□□ -2.48
HMGB3O15347 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.42□□□□□ -2.48
HMGB3O15347 AC087683.2-201ENST00000611384 326 ntBASIC-0.42□□□□□ -2.48
HMGB3O15347 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
HMGB3O15347 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.43□□□□□ -2.48
HMGB3O15347 SNORA36.1-201ENST00000363424 132 ntBASIC-0.43□□□□□ -2.48
HMGB3O15347 RNU6-127P-201ENST00000390897 107 ntBASIC-0.43□□□□□ -2.48
HMGB3O15347 AL390729.2-201ENST00000416137 156 ntBASIC-0.43□□□□□ -2.48
HMGB3O15347 AL358176.2-201ENST00000425769 204 ntBASIC-0.43□□□□□ -2.48
HMGB3O15347 MTND4P32-201ENST00000437189 1237 ntBASIC-0.43□□□□□ -2.48
HMGB3O15347 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.43□□□□□ -2.48
HMGB3O15347 RN7SKP287-201ENST00000516546 266 ntBASIC-0.43□□□□□ -2.48
HMGB3O15347 MIR1273G-201ENST00000577677 100 ntBASIC-0.43□□□□□ -2.48
HMGB3O15347 MIR548AR-201ENST00000582191 57 ntBASIC-0.43□□□□□ -2.48
HMGB3O15347 PIGPP4-201ENST00000584447 307 ntBASIC-0.43□□□□□ -2.48
HMGB3O15347 AC245014.2-201ENST00000603689 287 ntBASIC-0.43□□□□□ -2.48
HMGB3O15347 AC246785.4-201ENST00000605374 287 ntBASIC-0.43□□□□□ -2.48
HMGB3O15347 AL158063.1-201ENST00000615349 536 ntBASIC-0.43□□□□□ -2.48
HMGB3O15347 AC009248.2-201ENST00000619826 254 ntBASIC-0.43□□□□□ -2.48
HMGB3O15347 AC006504.8-201ENST00000621046 635 ntBASIC-0.43□□□□□ -2.48
HMGB3O15347 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.43□□□□□ -2.48
HMGB3O15347 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.43□□□□□ -2.48
HMGB3O15347 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.44□□□□□ -2.48
HMGB3O15347 RNU6-716P-201ENST00000365621 103 ntBASIC-0.44□□□□□ -2.48
HMGB3O15347 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.44□□□□□ -2.48
HMGB3O15347 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.44□□□□□ -2.48
HMGB3O15347 MIR938-201ENST00000401216 83 ntBASIC-0.44□□□□□ -2.48
HMGB3O15347 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.44□□□□□ -2.48
HMGB3O15347 AL353572.1-201ENST00000442490 417 ntBASIC-0.44□□□□□ -2.48
HMGB3O15347 MTCO3P38-201ENST00000468910 766 ntBASIC-0.44□□□□□ -2.48
HMGB3O15347 RPL17P19-201ENST00000489069 552 ntBASIC-0.44□□□□□ -2.48
HMGB3O15347 RNU6-63P-201ENST00000516690 95 ntBASIC-0.44□□□□□ -2.48
HMGB3O15347 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.44□□□□□ -2.48
HMGB3O15347 ELOCP32-201ENST00000548625 324 ntBASIC-0.44□□□□□ -2.48
HMGB3O15347 MIR548AB-201ENST00000584917 84 ntBASIC-0.44□□□□□ -2.48
HMGB3O15347 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.44□□□□□ -2.48
HMGB3O15347 AL136370.1-201ENST00000608166 691 ntBASIC-0.44□□□□□ -2.48
HMGB3O15347 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.44□□□□□ -2.48
HMGB3O15347 AP001506.1-201ENST00000615444 211 ntBASIC-0.44□□□□□ -2.48
HMGB3O15347 RNA5SP432-201ENST00000362480 116 ntBASIC-0.45□□□□□ -2.48
HMGB3O15347 MIR593-201ENST00000384856 100 ntBASIC-0.45□□□□□ -2.48
HMGB3O15347 MIR518E-201ENST00000385252 88 ntBASIC-0.45□□□□□ -2.48
HMGB3O15347 SNORD28B-201ENST00000390993 75 ntBASIC-0.45□□□□□ -2.48
HMGB3O15347 AL590002.1-201ENST00000406554 418 ntBASIC-0.45□□□□□ -2.48
HMGB3O15347 MIR1197-201ENST00000408818 88 ntBASIC-0.45□□□□□ -2.48
HMGB3O15347 MIR548H2-201ENST00000408874 88 ntBASIC-0.45□□□□□ -2.48
HMGB3O15347 RNU2-54P-201ENST00000410299 190 ntBASIC-0.45□□□□□ -2.48
HMGB3O15347 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.45□□□□□ -2.48
HMGB3O15347 PDCL2P1-201ENST00000419302 352 ntBASIC-0.45□□□□□ -2.48
HMGB3O15347 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.45□□□□□ -2.48
HMGB3O15347 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
HMGB3O15347 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.45□□□□□ -2.48
HMGB3O15347 MTCO1P29-201ENST00000496868 288 ntBASIC-0.45□□□□□ -2.48
HMGB3O15347 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.45□□□□□ -2.48
HMGB3O15347 AC116353.2-201ENST00000505332 712 ntBASIC-0.45□□□□□ -2.48
HMGB3O15347 AC092436.3-201ENST00000511788 257 ntBASIC-0.45□□□□□ -2.48
HMGB3O15347 RNU6-320P-201ENST00000516511 106 ntBASIC-0.45□□□□□ -2.48
HMGB3O15347 SNORD45.4-201ENST00000516629 73 ntBASIC-0.45□□□□□ -2.48
HMGB3O15347 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms