Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC121247.2-201ENST00000604776 136 ntBASIC-1.08□□□□□ -2.58
CHD1O14646 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-1.08□□□□□ -2.58
CHD1O14646 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.09□□□□□ -2.58
CHD1O14646 RNU6-462P-201ENST00000362659 105 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 RNU6-560P-201ENST00000364007 108 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 RNU6-480P-201ENST00000384332 107 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 AC137499.1-201ENST00000427602 88 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.09□□□□□ -2.58
CHD1O14646 RNU7-51P-201ENST00000516560 62 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 AC068587.5-201ENST00000528506 175 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 MIR4432-201ENST00000581823 84 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 AC020891.4-201ENST00000605745 93 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 AC012409.4-201ENST00000612923 249 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 AL442067.1-201ENST00000613261 223 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 ZNF204P-201ENST00000416749 2397 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 RNU6-336P-201ENST00000364891 107 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 SNORD14.1-201ENST00000365609 90 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 RNU2-39P-201ENST00000410604 198 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 AL031779.1-201ENST00000415663 330 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 SNORD92-201ENST00000585078 85 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 AC008608.1-201ENST00000603910 127 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 AP002782.1-201ENST00000623107 614 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 AC091304.10-201ENST00000641554 121 ntBASIC-1.09□□□□□ -2.58
CHD1O14646 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.1□□□□□ -2.59
CHD1O14646 AC117470.1-201ENST00000381974 330 ntBASIC-1.1□□□□□ -2.59
CHD1O14646 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.1□□□□□ -2.59
CHD1O14646 AC098592.1-201ENST00000419352 333 ntBASIC-1.1□□□□□ -2.59
CHD1O14646 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.1□□□□□ -2.59
CHD1O14646 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-1.1□□□□□ -2.59
CHD1O14646 BTBD7P2-201ENST00000441962 620 ntBASIC-1.1□□□□□ -2.59
CHD1O14646 ZNF114P1-201ENST00000453500 292 ntBASIC-1.1□□□□□ -2.59
CHD1O14646 AC093303.1-201ENST00000514549 295 ntBASIC-1.1□□□□□ -2.59
CHD1O14646 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.1□□□□□ -2.59
CHD1O14646 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-1.1□□□□□ -2.59
CHD1O14646 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1.1□□□□□ -2.59
CHD1O14646 MIR548AR-201ENST00000582191 57 ntBASIC-1.1□□□□□ -2.59
CHD1O14646 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-1.1□□□□□ -2.59
CHD1O14646 AC125232.2-201ENST00000592457 143 ntBASIC-1.1□□□□□ -2.59
CHD1O14646 MIR7107-201ENST00000611489 80 ntBASIC-1.1□□□□□ -2.59
CHD1O14646 Y_RNA.370-201ENST00000365589 108 ntBASIC-1.11□□□□□ -2.59
CHD1O14646 RNU6-190P-201ENST00000384154 102 ntBASIC-1.11□□□□□ -2.59
CHD1O14646 MIR802-201ENST00000390235 94 ntBASIC-1.11□□□□□ -2.59
CHD1O14646 AC015818.7-201ENST00000428754 109 ntBASIC-1.11□□□□□ -2.59
CHD1O14646 AC114878.1-201ENST00000441166 358 ntBASIC-1.11□□□□□ -2.59
CHD1O14646 AC087499.7-201ENST00000441958 109 ntBASIC-1.11□□□□□ -2.59
CHD1O14646 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-1.11□□□□□ -2.59
CHD1O14646 RNU6-344P-201ENST00000516635 111 ntBASIC-1.11□□□□□ -2.59
CHD1O14646 RNU7-156P-201ENST00000517214 74 ntBASIC-1.11□□□□□ -2.59
CHD1O14646 MIR4264-201ENST00000583520 66 ntBASIC-1.11□□□□□ -2.59
CHD1O14646 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.11□□□□□ -2.59
CHD1O14646 U8.5-201ENST00000364528 136 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 MIR516B2-201ENST00000385190 85 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-1.12□□□□□ -2.59
CHD1O14646 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.12□□□□□ -2.59
CHD1O14646 MTND1P14-201ENST00000427400 950 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 MIR18B-201ENST00000454574 71 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 AC010493.1-201ENST00000513479 292 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 AC006435.5-201ENST00000624486 112 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 SNORA36A-201ENST00000384221 132 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 RNU6-125P-201ENST00000384505 107 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 AL355143.1-201ENST00000407101 841 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 AL353572.1-201ENST00000442490 417 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 RNU6-897P-201ENST00000517135 105 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 MIR3925-201ENST00000584674 77 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 MIR548AD-201ENST00000584780 82 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 AC121334.2-201ENST00000605387 271 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 AC016911.1-201ENST00000613297 452 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 AC023158.2-201ENST00000614876 543 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 AC078880.5-201ENST00000617845 421 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 MTND4P9-201ENST00000507819 1346 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.12□□□□□ -2.59
CHD1O14646 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.13□□□□□ -2.59
CHD1O14646 RNY4P7-201ENST00000364600 96 ntBASIC-1.13□□□□□ -2.59
CHD1O14646 MIR548L-201ENST00000408303 86 ntBASIC-1.13□□□□□ -2.59
CHD1O14646 EEF1A1P40-201ENST00000412883 573 ntBASIC-1.13□□□□□ -2.59
CHD1O14646 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.13□□□□□ -2.59
CHD1O14646 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.13□□□□□ -2.59
CHD1O14646 RNU7-182P-201ENST00000459009 62 ntBASIC-1.13□□□□□ -2.59
CHD1O14646 MIR6514-201ENST00000622549 70 ntBASIC-1.13□□□□□ -2.59
CHD1O14646 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-1.14□□□□□ -2.59
CHD1O14646 RNU6-873P-201ENST00000363833 107 ntBASIC-1.14□□□□□ -2.59
CHD1O14646 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.14□□□□□ -2.59
CHD1O14646 SNORA3B-201ENST00000391305 131 ntBASIC-1.14□□□□□ -2.59
CHD1O14646 RNU2-54P-201ENST00000410299 190 ntBASIC-1.14□□□□□ -2.59
CHD1O14646 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.14□□□□□ -2.59
CHD1O14646 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-1.14□□□□□ -2.59
CHD1O14646 AL358944.1-201ENST00000528537 144 ntBASIC-1.14□□□□□ -2.59
CHD1O14646 AL445523.1-201ENST00000451184 1362 ntBASIC-1.14□□□□□ -2.59
CHD1O14646 RNU4-16P-201ENST00000364737 141 ntBASIC-1.15□□□□□ -2.59
CHD1O14646 RNU6-119P-201ENST00000364882 107 ntBASIC-1.15□□□□□ -2.59
CHD1O14646 MCFD2P1-201ENST00000417812 300 ntBASIC-1.15□□□□□ -2.59
CHD1O14646 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.15□□□□□ -2.59
CHD1O14646 AL158053.1-201ENST00000441503 453 ntBASIC-1.15□□□□□ -2.59
CHD1O14646 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.15□□□□□ -2.59
CHD1O14646 RNA5SP180-201ENST00000516181 101 ntBASIC-1.15□□□□□ -2.59
CHD1O14646 AC105029.1-201ENST00000520250 669 ntBASIC-1.15□□□□□ -2.59
CHD1O14646 MIR5706-201ENST00000579841 80 ntBASIC-1.15□□□□□ -2.59
CHD1O14646 MIR544B-201ENST00000582372 78 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms