Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RNU2-2P-201ENST00000410396 191 ntBASIC2.55□□□□□ -2
TRIM38O00635 AC007064.1-201ENST00000412238 351 ntBASIC2.55□□□□□ -2
TRIM38O00635 EDDM3CP-201ENST00000415977 425 ntBASIC2.55□□□□□ -2
TRIM38O00635 ZNF204P-201ENST00000416749 2397 ntBASIC2.55□□□□□ -2
TRIM38O00635 AC114982.1-201ENST00000469402 321 ntBASIC2.55□□□□□ -2
TRIM38O00635 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.55□□□□□ -2
TRIM38O00635 RNA5SP282-201ENST00000516355 108 ntBASIC2.55□□□□□ -2
TRIM38O00635 RNU5F-4P-201ENST00000516581 114 ntBASIC2.55□□□□□ -2
TRIM38O00635 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.55□□□□□ -2
TRIM38O00635 MIR3126-201ENST00000577443 74 ntBASIC2.55□□□□□ -2
TRIM38O00635 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.55□□□□□ -2
TRIM38O00635 AL049779.4-201ENST00000604500 156 ntBASIC2.55□□□□□ -2
TRIM38O00635 RNU2-4P-201ENST00000606190 192 ntBASIC2.55□□□□□ -2
TRIM38O00635 U2.15-201ENST00000611544 191 ntBASIC2.55□□□□□ -2
TRIM38O00635 U2.16-201ENST00000613119 191 ntBASIC2.55□□□□□ -2
TRIM38O00635 U2.12-201ENST00000613778 191 ntBASIC2.55□□□□□ -2
TRIM38O00635 U2.9-201ENST00000615427 191 ntBASIC2.55□□□□□ -2
TRIM38O00635 U2.11-201ENST00000616345 191 ntBASIC2.55□□□□□ -2
TRIM38O00635 U2.2-201ENST00000616535 191 ntBASIC2.55□□□□□ -2
TRIM38O00635 U2.3-201ENST00000617785 191 ntBASIC2.55□□□□□ -2
TRIM38O00635 U2.19-201ENST00000618602 191 ntBASIC2.55□□□□□ -2
TRIM38O00635 RNU2-1-201ENST00000618664 191 ntBASIC2.55□□□□□ -2
TRIM38O00635 U2.6-201ENST00000619225 191 ntBASIC2.55□□□□□ -2
TRIM38O00635 U2.5-201ENST00000619465 191 ntBASIC2.55□□□□□ -2
TRIM38O00635 U2.10-201ENST00000620268 191 ntBASIC2.55□□□□□ -2
TRIM38O00635 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.54□□□□□ -2
TRIM38O00635 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM38O00635 Y_RNA.101-201ENST00000363154 102 ntBASIC2.54□□□□□ -2
TRIM38O00635 Y_RNA.218-201ENST00000364218 104 ntBASIC2.54□□□□□ -2
TRIM38O00635 Y_RNA.238-201ENST00000364441 102 ntBASIC2.54□□□□□ -2
TRIM38O00635 RNU1-138P-201ENST00000384093 164 ntBASIC2.54□□□□□ -2
TRIM38O00635 SNORA3.2-201ENST00000408221 125 ntBASIC2.54□□□□□ -2
TRIM38O00635 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.54□□□□□ -2
TRIM38O00635 AC027124.2-201ENST00000428249 105 ntBASIC2.54□□□□□ -2
TRIM38O00635 AC010095.1-201ENST00000443543 144 ntBASIC2.54□□□□□ -2
TRIM38O00635 SNORA4.4-201ENST00000515921 135 ntBASIC2.54□□□□□ -2
TRIM38O00635 RNU1-104P-201ENST00000517280 175 ntBASIC2.54□□□□□ -2
TRIM38O00635 DEFB131C-201ENST00000528817 165 ntBASIC2.54□□□□□ -2
TRIM38O00635 MIR4635-201ENST00000583759 79 ntBASIC2.54□□□□□ -2
TRIM38O00635 Y_RNA.778-201ENST00000620203 90 ntBASIC2.54□□□□□ -2
TRIM38O00635 RNA5SP289-201ENST00000362332 137 ntBASIC2.53□□□□□ -2
TRIM38O00635 Y_RNA.7-201ENST00000362352 102 ntBASIC2.53□□□□□ -2
TRIM38O00635 Y_RNA.23-201ENST00000362496 106 ntBASIC2.53□□□□□ -2
TRIM38O00635 RNU6-1272P-201ENST00000362776 107 ntBASIC2.53□□□□□ -2
TRIM38O00635 RNU6-151P-201ENST00000364158 107 ntBASIC2.53□□□□□ -2
TRIM38O00635 RNU6-312P-201ENST00000364629 107 ntBASIC2.53□□□□□ -2
TRIM38O00635 RNU6-1199P-201ENST00000411249 104 ntBASIC2.53□□□□□ -2
TRIM38O00635 AL035461.1-201ENST00000421490 332 ntBASIC2.53□□□□□ -2
TRIM38O00635 SUMO1P4-201ENST00000429430 302 ntBASIC2.53□□□□□ -2
TRIM38O00635 RPS12P2-201ENST00000439728 269 ntBASIC2.53□□□□□ -2
TRIM38O00635 AC008267.6-201ENST00000441664 139 ntBASIC2.53□□□□□ -2
TRIM38O00635 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.53□□□□□ -2
TRIM38O00635 AC245102.2-201ENST00000448956 180 ntBASIC2.53□□□□□ -2
TRIM38O00635 AL137159.1-201ENST00000452808 512 ntBASIC2.53□□□□□ -2
TRIM38O00635 AC005042.3-201ENST00000453230 174 ntBASIC2.53□□□□□ -2
TRIM38O00635 AC010409.1-201ENST00000487382 476 ntBASIC2.53□□□□□ -2
TRIM38O00635 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.53□□□□□ -2
TRIM38O00635 RNA5SP320-201ENST00000516263 124 ntBASIC2.53□□□□□ -2
TRIM38O00635 RNU6-344P-201ENST00000516635 111 ntBASIC2.53□□□□□ -2
TRIM38O00635 RNU6-1098P-201ENST00000516772 96 ntBASIC2.53□□□□□ -2
TRIM38O00635 RNA5SP490-201ENST00000517141 136 ntBASIC2.53□□□□□ -2
TRIM38O00635 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.53□□□□□ -2
TRIM38O00635 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.53□□□□□ -2
TRIM38O00635 CTSLP2-204ENST00000629029 392 ntBASIC2.53□□□□□ -2
TRIM38O00635 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
TRIM38O00635 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
TRIM38O00635 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM38O00635 Y_RNA.75-201ENST00000362927 97 ntBASIC2.52□□□□□ -2.01
TRIM38O00635 Y_RNA.99-201ENST00000363138 105 ntBASIC2.52□□□□□ -2.01
TRIM38O00635 Y_RNA.182-201ENST00000363880 111 ntBASIC2.52□□□□□ -2.01
TRIM38O00635 RNU6-153P-201ENST00000364422 104 ntBASIC2.52□□□□□ -2.01
TRIM38O00635 Y_RNA.273-201ENST00000364703 102 ntBASIC2.52□□□□□ -2.01
TRIM38O00635 RNU1-91P-201ENST00000364746 163 ntBASIC2.52□□□□□ -2.01
TRIM38O00635 SNORD31B-201ENST00000364977 69 ntBASIC2.52□□□□□ -2.01
TRIM38O00635 MIR300-201ENST00000401138 83 ntBASIC2.52□□□□□ -2.01
TRIM38O00635 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM38O00635 BTF3P11-201ENST00000426582 477 ntBASIC2.52□□□□□ -2.01
TRIM38O00635 AC004386.2-201ENST00000441858 148 ntBASIC2.52□□□□□ -2.01
TRIM38O00635 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM38O00635 MIR449C-201ENST00000516047 92 ntBASIC2.52□□□□□ -2.01
TRIM38O00635 RNU2-44P-201ENST00000516795 194 ntBASIC2.52□□□□□ -2.01
TRIM38O00635 RNU6-971P-201ENST00000516920 106 ntBASIC2.52□□□□□ -2.01
TRIM38O00635 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM38O00635 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM38O00635 MIR5006-201ENST00000583027 110 ntBASIC2.52□□□□□ -2.01
TRIM38O00635 MIR5092-201ENST00000583139 88 ntBASIC2.52□□□□□ -2.01
TRIM38O00635 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.52□□□□□ -2.01
TRIM38O00635 ZNF271P-202ENST00000465539 1970 ntBASIC2.52□□□□□ -2.01
TRIM38O00635 AC010332.2-201ENST00000613083 1904 ntBASIC2.52□□□□□ -2.01
TRIM38O00635 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
TRIM38O00635 RNU1-62P-201ENST00000362599 164 ntBASIC2.51□□□□□ -2.01
TRIM38O00635 RNU6-873P-201ENST00000363833 107 ntBASIC2.51□□□□□ -2.01
TRIM38O00635 SNORA40.19-201ENST00000390846 128 ntBASIC2.51□□□□□ -2.01
TRIM38O00635 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM38O00635 AC016925.1-201ENST00000458303 298 ntBASIC2.51□□□□□ -2.01
TRIM38O00635 AC005840.1-201ENST00000498412 377 ntBASIC2.51□□□□□ -2.01
TRIM38O00635 AC093259.1-201ENST00000509755 300 ntBASIC2.51□□□□□ -2.01
TRIM38O00635 AP002001.1-203ENST00000534002 267 ntBASIC2.51□□□□□ -2.01
TRIM38O00635 AC233702.2-202ENST00000562547 291 ntBASIC2.51□□□□□ -2.01
TRIM38O00635 DEFB117-201ENST00000602356 141 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms