Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RNU6-1156P-201ENST00000410365 100 ntBASIC1.2□□□□□ -2.22
SLC28A1O00337 MTND4P28-201ENST00000426217 387 ntBASIC1.2□□□□□ -2.22
SLC28A1O00337 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
SLC28A1O00337 AC004223.1-201ENST00000479840 271 ntBASIC1.2□□□□□ -2.22
SLC28A1O00337 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.2□□□□□ -2.22
SLC28A1O00337 AC082651.2-201ENST00000496833 166 ntBASIC1.2□□□□□ -2.22
SLC28A1O00337 RN7SKP179-201ENST00000516126 217 ntBASIC1.2□□□□□ -2.22
SLC28A1O00337 RNU7-28P-201ENST00000516759 62 ntBASIC1.2□□□□□ -2.22
SLC28A1O00337 AP002004.2-201ENST00000531656 154 ntBASIC1.2□□□□□ -2.22
SLC28A1O00337 AC015712.3-201ENST00000559380 164 ntBASIC1.2□□□□□ -2.22
SLC28A1O00337 MIR4778-201ENST00000577635 80 ntBASIC1.2□□□□□ -2.22
SLC28A1O00337 AC091178.2-201ENST00000584401 117 ntBASIC1.2□□□□□ -2.22
SLC28A1O00337 AC005828.6-201ENST00000606610 232 ntBASIC1.2□□□□□ -2.22
SLC28A1O00337 AC122108.2-201ENST00000611946 526 ntBASIC1.2□□□□□ -2.22
SLC28A1O00337 AC127459.3-201ENST00000624328 466 ntBASIC1.2□□□□□ -2.22
SLC28A1O00337 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.2□□□□□ -2.22
SLC28A1O00337 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SLC28A1O00337 RNA5SP327-201ENST00000362494 101 ntBASIC1.19□□□□□ -2.22
SLC28A1O00337 RNU6-457P-201ENST00000363999 107 ntBASIC1.19□□□□□ -2.22
SLC28A1O00337 SNORA25.8-201ENST00000364831 128 ntBASIC1.19□□□□□ -2.22
SLC28A1O00337 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.19□□□□□ -2.22
SLC28A1O00337 Y_RNA.592-201ENST00000410274 109 ntBASIC1.19□□□□□ -2.22
SLC28A1O00337 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.19□□□□□ -2.22
SLC28A1O00337 AC098614.3-201ENST00000438957 440 ntBASIC1.19□□□□□ -2.22
SLC28A1O00337 AC009474.2-201ENST00000451383 136 ntBASIC1.19□□□□□ -2.22
SLC28A1O00337 RNU6-120P-201ENST00000516077 103 ntBASIC1.19□□□□□ -2.22
SLC28A1O00337 RNU7-4P-201ENST00000516961 62 ntBASIC1.19□□□□□ -2.22
SLC28A1O00337 MIR3660-201ENST00000584845 100 ntBASIC1.19□□□□□ -2.22
SLC28A1O00337 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
SLC28A1O00337 AC087588.2-201ENST00000617667 426 ntBASIC1.19□□□□□ -2.22
SLC28A1O00337 SNORA1B-201ENST00000362535 133 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 RNU6-199P-201ENST00000362954 107 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 RNU6-890P-201ENST00000384121 107 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 RNU6-424P-201ENST00000384367 105 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 MIR520G-201ENST00000385064 90 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.18□□□□□ -2.22
SLC28A1O00337 CALM2P4-201ENST00000430810 426 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.18□□□□□ -2.22
SLC28A1O00337 RPS29P29-201ENST00000456396 171 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 OR9P1P-201ENST00000496431 281 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 RNU6-408P-201ENST00000515910 100 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 RNU6-1291P-201ENST00000516591 104 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 RNA5SP168-201ENST00000516642 112 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 RNU6-922P-201ENST00000516753 99 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 AC090821.2-201ENST00000523552 176 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.18□□□□□ -2.22
SLC28A1O00337 DNAJC19P9-201ENST00000555084 351 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 AL513534.2-201ENST00000603836 250 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 AC113139.1-201ENST00000605049 239 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 AC133104.2-201ENST00000615272 193 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 AC068647.2-201ENST00000637380 353 ntBASIC1.18□□□□□ -2.22
SLC28A1O00337 SNORD114-7-201ENST00000362520 77 ntBASIC1.17□□□□□ -2.22
SLC28A1O00337 Y_RNA.124-201ENST00000363339 93 ntBASIC1.17□□□□□ -2.22
SLC28A1O00337 Y_RNA.243-201ENST00000364481 109 ntBASIC1.17□□□□□ -2.22
SLC28A1O00337 MIR764-201ENST00000390811 85 ntBASIC1.17□□□□□ -2.22
SLC28A1O00337 RNA5SP482-201ENST00000391269 118 ntBASIC1.17□□□□□ -2.22
SLC28A1O00337 RNU6-1304P-201ENST00000411374 106 ntBASIC1.17□□□□□ -2.22
SLC28A1O00337 RPL30P15-201ENST00000457129 321 ntBASIC1.17□□□□□ -2.22
SLC28A1O00337 Y_RNA.653-201ENST00000459091 95 ntBASIC1.17□□□□□ -2.22
SLC28A1O00337 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.17□□□□□ -2.22
SLC28A1O00337 PRDX4P1-201ENST00000507189 574 ntBASIC1.17□□□□□ -2.22
SLC28A1O00337 RNU6-559P-201ENST00000516151 98 ntBASIC1.17□□□□□ -2.22
SLC28A1O00337 AC144568.1-201ENST00000520139 137 ntBASIC1.17□□□□□ -2.22
SLC28A1O00337 MIR4421-201ENST00000578133 69 ntBASIC1.17□□□□□ -2.22
SLC28A1O00337 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
SLC28A1O00337 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SLC28A1O00337 RNU6-117P-201ENST00000365415 107 ntBASIC1.16□□□□□ -2.22
SLC28A1O00337 Y_RNA.474-201ENST00000384341 102 ntBASIC1.16□□□□□ -2.22
SLC28A1O00337 U8.16-201ENST00000391279 133 ntBASIC1.16□□□□□ -2.22
SLC28A1O00337 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.16□□□□□ -2.22
SLC28A1O00337 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.16□□□□□ -2.22
SLC28A1O00337 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.16□□□□□ -2.22
SLC28A1O00337 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.16□□□□□ -2.22
SLC28A1O00337 FCF1P4-201ENST00000448326 183 ntBASIC1.16□□□□□ -2.22
SLC28A1O00337 AC105758.1-201ENST00000506038 399 ntBASIC1.16□□□□□ -2.22
SLC28A1O00337 SNORA20.3-201ENST00000516880 132 ntBASIC1.16□□□□□ -2.22
SLC28A1O00337 RNU6-165P-201ENST00000517170 99 ntBASIC1.16□□□□□ -2.22
SLC28A1O00337 AC023442.1-201ENST00000531247 422 ntBASIC1.16□□□□□ -2.22
SLC28A1O00337 AC025253.1-201ENST00000613623 543 ntBASIC1.16□□□□□ -2.22
SLC28A1O00337 AC099654.14-201ENST00000638599 341 ntBASIC1.16□□□□□ -2.22
SLC28A1O00337 AC005592.1-201ENST00000566527 1640 ntBASIC1.15□□□□□ -2.22
SLC28A1O00337 RNU6-926P-201ENST00000384075 107 ntBASIC1.15□□□□□ -2.23
SLC28A1O00337 RNU5A-5P-201ENST00000411054 116 ntBASIC1.15□□□□□ -2.23
SLC28A1O00337 AC138393.2-201ENST00000414742 246 ntBASIC1.15□□□□□ -2.23
SLC28A1O00337 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.15□□□□□ -2.23
SLC28A1O00337 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.15□□□□□ -2.23
SLC28A1O00337 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.15□□□□□ -2.23
SLC28A1O00337 DYNLT3P2-201ENST00000442517 295 ntBASIC1.15□□□□□ -2.23
SLC28A1O00337 AC233266.1-201ENST00000454518 96 ntBASIC1.15□□□□□ -2.23
SLC28A1O00337 RNU6-470P-201ENST00000515954 104 ntBASIC1.15□□□□□ -2.23
SLC28A1O00337 RNU6-1096P-201ENST00000517089 102 ntBASIC1.15□□□□□ -2.23
SLC28A1O00337 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.15□□□□□ -2.23
SLC28A1O00337 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.15□□□□□ -2.23
SLC28A1O00337 AC242852.1-201ENST00000612151 96 ntBASIC1.15□□□□□ -2.23
SLC28A1O00337 AC004467.1-201ENST00000615678 330 ntBASIC1.15□□□□□ -2.23
SLC28A1O00337 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.15□□□□□ -2.23
SLC28A1O00337 AC244015.1-201ENST00000622301 99 ntBASIC1.15□□□□□ -2.23
SLC28A1O00337 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SLC28A1O00337 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms