Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 Y_RNA.592-201ENST00000410274 109 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 MTCO3P19-201ENST00000415864 321 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.25□□□□□ -2.21
PDLIM1O00151 RAB28P5-201ENST00000427490 651 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.25□□□□□ -2.21
PDLIM1O00151 AL135790.2-201ENST00000437701 267 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 AC105758.1-201ENST00000506038 399 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 RNU6-408P-201ENST00000515910 100 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.25□□□□□ -2.21
PDLIM1O00151 SUMO2P16-201ENST00000519475 264 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.25□□□□□ -2.21
PDLIM1O00151 AL161670.1-201ENST00000554348 137 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 AC015688.6-201ENST00000577737 104 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.25□□□□□ -2.21
PDLIM1O00151 AC021506.2-201ENST00000612354 169 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 AC040896.1-201ENST00000613819 479 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 AC087588.2-201ENST00000617667 426 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 RNU6-1065P-201ENST00000384513 106 ntBASIC1.24□□□□□ -2.21
PDLIM1O00151 AC027119.1-201ENST00000440877 241 ntBASIC1.24□□□□□ -2.21
PDLIM1O00151 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.24□□□□□ -2.21
PDLIM1O00151 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.24□□□□□ -2.21
PDLIM1O00151 AC097462.1-201ENST00000514125 324 ntBASIC1.24□□□□□ -2.21
PDLIM1O00151 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.24□□□□□ -2.21
PDLIM1O00151 AC090821.2-201ENST00000523552 176 ntBASIC1.24□□□□□ -2.21
PDLIM1O00151 RBM11P1-201ENST00000604951 799 ntBASIC1.24□□□□□ -2.21
PDLIM1O00151 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.24□□□□□ -2.21
PDLIM1O00151 MIR1302-1-201ENST00000637932 143 ntBASIC1.24□□□□□ -2.21
PDLIM1O00151 ZNF209P-201ENST00000593450 2304 ntBASIC1.24□□□□□ -2.21
PDLIM1O00151 RNU6-1123P-201ENST00000362347 106 ntBASIC1.23□□□□□ -2.21
PDLIM1O00151 SNORA27.1-201ENST00000362604 124 ntBASIC1.23□□□□□ -2.21
PDLIM1O00151 RNU1-22P-201ENST00000363334 158 ntBASIC1.23□□□□□ -2.21
PDLIM1O00151 RNY3P11-201ENST00000364153 102 ntBASIC1.23□□□□□ -2.21
PDLIM1O00151 SNORA25.8-201ENST00000364831 128 ntBASIC1.23□□□□□ -2.21
PDLIM1O00151 RNU6-376P-201ENST00000384731 106 ntBASIC1.23□□□□□ -2.21
PDLIM1O00151 AC018865.2-201ENST00000423631 129 ntBASIC1.23□□□□□ -2.21
PDLIM1O00151 SNX2P2-201ENST00000424553 323 ntBASIC1.23□□□□□ -2.21
PDLIM1O00151 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.23□□□□□ -2.21
PDLIM1O00151 AC093019.1-201ENST00000443135 252 ntBASIC1.23□□□□□ -2.21
PDLIM1O00151 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.23□□□□□ -2.21
PDLIM1O00151 AL162424.1-201ENST00000602325 221 ntBASIC1.23□□□□□ -2.21
PDLIM1O00151 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.23□□□□□ -2.21
PDLIM1O00151 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.23□□□□□ -2.21
PDLIM1O00151 MIR6079-201ENST00000635807 62 ntBASIC1.23□□□□□ -2.21
PDLIM1O00151 U6.115-201ENST00000636045 103 ntBASIC1.23□□□□□ -2.21
PDLIM1O00151 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
PDLIM1O00151 MIR410-201ENST00000362222 80 ntBASIC1.22□□□□□ -2.21
PDLIM1O00151 RNU6-454P-201ENST00000364292 107 ntBASIC1.22□□□□□ -2.21
PDLIM1O00151 Y_RNA.265-201ENST00000364677 108 ntBASIC1.22□□□□□ -2.21
PDLIM1O00151 Y_RNA.267-201ENST00000364679 109 ntBASIC1.22□□□□□ -2.21
PDLIM1O00151 MIR628-201ENST00000385229 95 ntBASIC1.22□□□□□ -2.21
PDLIM1O00151 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.22□□□□□ -2.21
PDLIM1O00151 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
PDLIM1O00151 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.22□□□□□ -2.21
PDLIM1O00151 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
PDLIM1O00151 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.22□□□□□ -2.21
PDLIM1O00151 Y_RNA.638-201ENST00000459374 113 ntBASIC1.22□□□□□ -2.21
PDLIM1O00151 RNU6-277P-201ENST00000516272 106 ntBASIC1.22□□□□□ -2.21
PDLIM1O00151 AP002001.1-203ENST00000534002 267 ntBASIC1.22□□□□□ -2.21
PDLIM1O00151 MIR4421-201ENST00000578133 69 ntBASIC1.22□□□□□ -2.21
PDLIM1O00151 AC084781.2-201ENST00000615568 161 ntBASIC1.22□□□□□ -2.21
PDLIM1O00151 AC004467.1-201ENST00000615678 330 ntBASIC1.22□□□□□ -2.21
PDLIM1O00151 RNU6-490P-201ENST00000362985 107 ntBASIC1.21□□□□□ -2.22
PDLIM1O00151 RNU6-136P-201ENST00000384663 107 ntBASIC1.21□□□□□ -2.22
PDLIM1O00151 RNY4P36-201ENST00000391116 96 ntBASIC1.21□□□□□ -2.22
PDLIM1O00151 MTCO2P27-201ENST00000420740 428 ntBASIC1.21□□□□□ -2.22
PDLIM1O00151 AC099799.1-201ENST00000439809 192 ntBASIC1.21□□□□□ -2.22
PDLIM1O00151 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.21□□□□□ -2.22
PDLIM1O00151 STAG3L5P-204ENST00000443759 179 ntBASIC1.21□□□□□ -2.22
PDLIM1O00151 PGBD4P5-201ENST00000445958 426 ntBASIC1.21□□□□□ -2.22
PDLIM1O00151 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.21□□□□□ -2.22
PDLIM1O00151 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.21□□□□□ -2.22
PDLIM1O00151 AC091951.2-201ENST00000500762 203 ntBASIC1.21□□□□□ -2.22
PDLIM1O00151 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.21□□□□□ -2.22
PDLIM1O00151 SNORA28-201ENST00000606769 126 ntBASIC1.21□□□□□ -2.22
PDLIM1O00151 snoU13.31-201ENST00000607291 104 ntBASIC1.21□□□□□ -2.22
PDLIM1O00151 AL365434.2-201ENST00000607979 234 ntBASIC1.21□□□□□ -2.22
PDLIM1O00151 AL132765.2-201ENST00000610812 351 ntBASIC1.21□□□□□ -2.22
PDLIM1O00151 AL078604.3-201ENST00000615580 211 ntBASIC1.21□□□□□ -2.22
PDLIM1O00151 AC127459.3-201ENST00000624328 466 ntBASIC1.21□□□□□ -2.22
PDLIM1O00151 MIR873-201ENST00000401120 77 ntBASIC1.2□□□□□ -2.22
PDLIM1O00151 MRPS18CP6-201ENST00000423587 223 ntBASIC1.2□□□□□ -2.22
PDLIM1O00151 RPS27P16-201ENST00000425758 201 ntBASIC1.2□□□□□ -2.22
PDLIM1O00151 SUMO1P2-201ENST00000452524 304 ntBASIC1.2□□□□□ -2.22
PDLIM1O00151 ELOCP24-201ENST00000456370 334 ntBASIC1.2□□□□□ -2.22
PDLIM1O00151 RNU6-1278P-201ENST00000516130 107 ntBASIC1.2□□□□□ -2.22
PDLIM1O00151 RNU2-56P-201ENST00000516826 190 ntBASIC1.2□□□□□ -2.22
PDLIM1O00151 Y_RNA.718-201ENST00000517110 102 ntBASIC1.2□□□□□ -2.22
PDLIM1O00151 AC023442.1-201ENST00000531247 422 ntBASIC1.2□□□□□ -2.22
PDLIM1O00151 AL355375.2-201ENST00000574825 175 ntBASIC1.2□□□□□ -2.22
PDLIM1O00151 MIR4498-201ENST00000577599 66 ntBASIC1.2□□□□□ -2.22
PDLIM1O00151 AL390123.1-201ENST00000603216 237 ntBASIC1.2□□□□□ -2.22
PDLIM1O00151 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.2□□□□□ -2.22
PDLIM1O00151 AC073349.3-201ENST00000617616 186 ntBASIC1.2□□□□□ -2.22
PDLIM1O00151 SNORD3E-202ENST00000627253 216 ntBASIC1.2□□□□□ -2.22
PDLIM1O00151 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
PDLIM1O00151 RNU6-961P-201ENST00000363893 105 ntBASIC1.19□□□□□ -2.22
PDLIM1O00151 Y_RNA.303-201ENST00000364998 94 ntBASIC1.19□□□□□ -2.22
PDLIM1O00151 Y_RNA.356-201ENST00000365475 113 ntBASIC1.19□□□□□ -2.22
PDLIM1O00151 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.19□□□□□ -2.22
PDLIM1O00151 MIR562-201ENST00000384894 95 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms