Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 FCF1P4-201ENST00000448326 183 ntBASIC1.45□□□□□ -2.18
NPIPA3F8WFD2 AC097462.1-201ENST00000514125 324 ntBASIC1.45□□□□□ -2.18
NPIPA3F8WFD2 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.45□□□□□ -2.18
NPIPA3F8WFD2 AC006600.1-201ENST00000572529 153 ntBASIC1.45□□□□□ -2.18
NPIPA3F8WFD2 AC104985.2-201ENST00000620598 500 ntBASIC1.45□□□□□ -2.18
NPIPA3F8WFD2 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.45□□□□□ -2.18
NPIPA3F8WFD2 RNU1-22P-201ENST00000363334 158 ntBASIC1.44□□□□□ -2.18
NPIPA3F8WFD2 RNU1-42P-201ENST00000364033 160 ntBASIC1.44□□□□□ -2.18
NPIPA3F8WFD2 RNU6-950P-201ENST00000384651 107 ntBASIC1.44□□□□□ -2.18
NPIPA3F8WFD2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.44□□□□□ -2.18
NPIPA3F8WFD2 RNU6-440P-201ENST00000390882 105 ntBASIC1.44□□□□□ -2.18
NPIPA3F8WFD2 SNORD78.2-201ENST00000391076 69 ntBASIC1.44□□□□□ -2.18
NPIPA3F8WFD2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.44□□□□□ -2.18
NPIPA3F8WFD2 MTCO3P19-201ENST00000415864 321 ntBASIC1.44□□□□□ -2.18
NPIPA3F8WFD2 AP1B1P2-201ENST00000416196 106 ntBASIC1.44□□□□□ -2.18
NPIPA3F8WFD2 AF228730.4-201ENST00000421457 183 ntBASIC1.44□□□□□ -2.18
NPIPA3F8WFD2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.44□□□□□ -2.18
NPIPA3F8WFD2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.44□□□□□ -2.18
NPIPA3F8WFD2 RPL21P9-201ENST00000556149 474 ntBASIC1.44□□□□□ -2.18
NPIPA3F8WFD2 AC055872.1-201ENST00000570978 278 ntBASIC1.44□□□□□ -2.18
NPIPA3F8WFD2 AL512598.1-201ENST00000610158 273 ntBASIC1.44□□□□□ -2.18
NPIPA3F8WFD2 AC018630.2-201ENST00000534866 2403 ntBASIC1.44□□□□□ -2.18
NPIPA3F8WFD2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
NPIPA3F8WFD2 RNU6-1115P-201ENST00000362490 106 ntBASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 Y_RNA.124-201ENST00000363339 93 ntBASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 SNORD1A-201ENST00000364968 72 ntBASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 MT-TD-201ENST00000387419 68 ntBASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 Y_RNA.579-201ENST00000390939 94 ntBASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 SNORA67.6-201ENST00000391093 99 ntBASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 RN7SKP200-201ENST00000410564 320 ntBASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 AC004965.1-201ENST00000413033 213 ntBASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 RNU7-94P-201ENST00000459576 63 ntBASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 AL163540.1-201ENST00000485382 386 ntBASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 RNU6-1012P-201ENST00000516606 109 ntBASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 MIR4659A-201ENST00000580269 81 ntBASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 VN1R91P-201ENST00000594377 169 ntBASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 AC092447.9-201ENST00000603395 144 ntBASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 AL645939.4-201ENST00000604495 135 ntBASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 BX248123.2-201ENST00000606318 124 ntBASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
NPIPA3F8WFD2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 RNU4-79P-201ENST00000362764 141 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 RNU6-626P-201ENST00000363354 107 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 RNU6-60P-201ENST00000364792 103 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 Y_RNA.496-201ENST00000384444 101 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 RNU6-376P-201ENST00000384731 106 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 RNU6-1031P-201ENST00000384773 107 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 MIR194-1-201ENST00000384892 85 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 RNU1-78P-201ENST00000391248 165 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 AL161935.2-201ENST00000414627 60 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 RNU6-911P-201ENST00000516523 104 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 AC019176.1-201ENST00000518519 225 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 RAB11AP2-201ENST00000545905 639 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 DNAJC19P9-201ENST00000555084 351 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 AC015720.1-201ENST00000565251 277 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 MIR4422-201ENST00000581938 83 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 AL021879.1-201ENST00000611756 288 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 AC021506.2-201ENST00000612354 169 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 MIR6079-201ENST00000635807 62 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 U6.92-201ENST00000636464 89 ntBASIC1.42□□□□□ -2.18
NPIPA3F8WFD2 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 Y_RNA.27-201ENST00000362540 103 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 Y_RNA.101-201ENST00000363154 102 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 Y_RNA.238-201ENST00000364441 102 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 Y_RNA.243-201ENST00000364481 109 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 Y_RNA.267-201ENST00000364679 109 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 RNU6-20P-201ENST00000384106 107 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 RNU6-136P-201ENST00000384663 107 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 MIR873-201ENST00000401120 77 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 AL137792.2-201ENST00000443484 235 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 RNU7-95P-201ENST00000459222 64 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 AC091021.1-201ENST00000468051 388 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 RPS26P55-201ENST00000471178 356 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 AC099513.1-201ENST00000490423 301 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 AC079140.2-201ENST00000506193 142 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 MIR4781-201ENST00000585250 76 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 AC005176.2-201ENST00000596933 147 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 AC006380.1-201ENST00000603598 186 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 AP001485.1-201ENST00000604799 199 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 LARP7P1-201ENST00000605576 316 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 AC127459.3-201ENST00000624328 466 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 MIR4272-201ENST00000635924 64 ntBASIC1.41□□□□□ -2.18
NPIPA3F8WFD2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.18
NPIPA3F8WFD2 Y_RNA.5-201ENST00000362334 102 ntBASIC1.4□□□□□ -2.19
NPIPA3F8WFD2 Y_RNA.315-201ENST00000365117 102 ntBASIC1.4□□□□□ -2.19
NPIPA3F8WFD2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.4□□□□□ -2.19
NPIPA3F8WFD2 MRPL35P1-201ENST00000404272 572 ntBASIC1.4□□□□□ -2.19
NPIPA3F8WFD2 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
NPIPA3F8WFD2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.4□□□□□ -2.19
NPIPA3F8WFD2 AC023790.1-201ENST00000482174 347 ntBASIC1.4□□□□□ -2.19
NPIPA3F8WFD2 RNU6-63P-201ENST00000516690 95 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms