Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.96□□□□□ -2.56
COL6A5A8TX70 AL050341.1-201ENST00000447743 313 ntBASIC-0.96□□□□□ -2.56
COL6A5A8TX70 BTF3P15-201ENST00000455606 336 ntBASIC-0.96□□□□□ -2.56
COL6A5A8TX70 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.96□□□□□ -2.56
COL6A5A8TX70 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 RPL22P17-201ENST00000438729 315 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 TMEM251P1-201ENST00000503717 318 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.97□□□□□ -2.56
COL6A5A8TX70 RNU6-311P-201ENST00000516224 102 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.97□□□□□ -2.56
COL6A5A8TX70 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-0.97□□□□□ -2.56
COL6A5A8TX70 AC245505.1-201ENST00000556398 224 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 AL596327.1-201ENST00000603629 213 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 AC034229.4-201ENST00000607861 441 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 SNORD115-12-201ENST00000362583 82 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 SNORD115-9-201ENST00000362912 82 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 SNORD115-19-201ENST00000363098 82 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 SNORD115-18-201ENST00000363293 82 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 SNORD115-17-201ENST00000364612 82 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 SNORD115-20-201ENST00000365099 82 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 MIR10A-201ENST00000385043 110 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 MIR660-201ENST00000385235 97 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 TPMTP2-201ENST00000414372 726 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 MTATP6P27-201ENST00000416987 621 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.97□□□□□ -2.56
COL6A5A8TX70 AC007684.1-201ENST00000609671 477 ntBASIC-0.97□□□□□ -2.56
COL6A5A8TX70 AP000568.1-201ENST00000282964 442 ntBASIC-0.98□□□□□ -2.57
COL6A5A8TX70 RNU6-199P-201ENST00000362954 107 ntBASIC-0.98□□□□□ -2.57
COL6A5A8TX70 RNU2-8P-201ENST00000410727 190 ntBASIC-0.98□□□□□ -2.57
COL6A5A8TX70 AC046134.1-201ENST00000514454 666 ntBASIC-0.98□□□□□ -2.57
COL6A5A8TX70 RNA5SP20-201ENST00000515976 84 ntBASIC-0.98□□□□□ -2.57
COL6A5A8TX70 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.98□□□□□ -2.57
COL6A5A8TX70 AC138749.4-201ENST00000563970 127 ntBASIC-0.98□□□□□ -2.57
COL6A5A8TX70 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.98□□□□□ -2.57
COL6A5A8TX70 FTX_4.1-201ENST00000616291 147 ntBASIC-0.98□□□□□ -2.57
COL6A5A8TX70 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.98□□□□□ -2.57
COL6A5A8TX70 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.98□□□□□ -2.57
COL6A5A8TX70 RNU4-76P-201ENST00000364509 141 ntBASIC-0.98□□□□□ -2.57
COL6A5A8TX70 RNA5SP117-201ENST00000365294 118 ntBASIC-0.98□□□□□ -2.57
COL6A5A8TX70 RNU6-54P-201ENST00000365563 107 ntBASIC-0.98□□□□□ -2.57
COL6A5A8TX70 RPP40P1-201ENST00000426762 456 ntBASIC-0.98□□□□□ -2.57
COL6A5A8TX70 AL627311.1-201ENST00000431514 115 ntBASIC-0.98□□□□□ -2.57
COL6A5A8TX70 AC018448.1-201ENST00000552843 316 ntBASIC-0.98□□□□□ -2.57
COL6A5A8TX70 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.98□□□□□ -2.57
COL6A5A8TX70 MIR4275-201ENST00000636486 87 ntBASIC-0.98□□□□□ -2.57
COL6A5A8TX70 SNORD24-201ENST00000383884 75 ntBASIC-0.99□□□□□ -2.57
COL6A5A8TX70 RNU6-921P-201ENST00000384361 107 ntBASIC-0.99□□□□□ -2.57
COL6A5A8TX70 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
COL6A5A8TX70 AL078595.1-201ENST00000404458 226 ntBASIC-0.99□□□□□ -2.57
COL6A5A8TX70 RNU6-141P-201ENST00000410499 105 ntBASIC-0.99□□□□□ -2.57
COL6A5A8TX70 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-0.99□□□□□ -2.57
COL6A5A8TX70 AC007000.2-201ENST00000442564 487 ntBASIC-0.99□□□□□ -2.57
COL6A5A8TX70 MTCO3P28-201ENST00000513351 515 ntBASIC-0.99□□□□□ -2.57
COL6A5A8TX70 TPRKBP2-201ENST00000565969 475 ntBASIC-0.99□□□□□ -2.57
COL6A5A8TX70 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.99□□□□□ -2.57
COL6A5A8TX70 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.99□□□□□ -2.57
COL6A5A8TX70 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.99□□□□□ -2.57
COL6A5A8TX70 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.99□□□□□ -2.57
COL6A5A8TX70 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.99□□□□□ -2.57
COL6A5A8TX70 SNORD75.2-201ENST00000408784 58 ntBASIC-0.99□□□□□ -2.57
COL6A5A8TX70 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.99□□□□□ -2.57
COL6A5A8TX70 AC015818.7-201ENST00000428754 109 ntBASIC-0.99□□□□□ -2.57
COL6A5A8TX70 RPL31P54-201ENST00000429803 370 ntBASIC-0.99□□□□□ -2.57
COL6A5A8TX70 AC087499.7-201ENST00000441958 109 ntBASIC-0.99□□□□□ -2.57
COL6A5A8TX70 MED28P2-201ENST00000475771 317 ntBASIC-0.99□□□□□ -2.57
COL6A5A8TX70 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.99□□□□□ -2.57
COL6A5A8TX70 SNORD63.1-201ENST00000516178 80 ntBASIC-0.99□□□□□ -2.57
COL6A5A8TX70 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.99□□□□□ -2.57
COL6A5A8TX70 AL929325.1-201ENST00000603096 117 ntBASIC-0.99□□□□□ -2.57
COL6A5A8TX70 DLEU2_6.3-201ENST00000340052 136 ntBASIC-1□□□□□ -2.57
COL6A5A8TX70 SNORD114-29-201ENST00000364819 70 ntBASIC-1□□□□□ -2.57
COL6A5A8TX70 RNU6-438P-201ENST00000365561 103 ntBASIC-1□□□□□ -2.57
COL6A5A8TX70 RNU6-1292P-201ENST00000383856 107 ntBASIC-1□□□□□ -2.57
COL6A5A8TX70 RNU6-364P-201ENST00000384387 107 ntBASIC-1□□□□□ -2.57
COL6A5A8TX70 MIR649-201ENST00000384843 97 ntBASIC-1□□□□□ -2.57
COL6A5A8TX70 MIR802-201ENST00000390235 94 ntBASIC-1□□□□□ -2.57
COL6A5A8TX70 CDK8P2-201ENST00000415020 547 ntBASIC-1□□□□□ -2.57
COL6A5A8TX70 USP9YP12-201ENST00000450481 570 ntBASIC-1□□□□□ -2.57
COL6A5A8TX70 RNU7-55P-201ENST00000459426 62 ntBASIC-1□□□□□ -2.57
COL6A5A8TX70 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-1□□□□□ -2.57
COL6A5A8TX70 AL445435.1-201ENST00000604232 665 ntBASIC-1□□□□□ -2.57
COL6A5A8TX70 AC010205.1-201ENST00000616668 449 ntBASIC-1□□□□□ -2.57
COL6A5A8TX70 DLEU2_6.2-201ENST00000620994 136 ntBASIC-1□□□□□ -2.57
COL6A5A8TX70 Y_RNA.501-201ENST00000384467 103 ntBASIC-1□□□□□ -2.57
COL6A5A8TX70 RNY4P25-201ENST00000459254 96 ntBASIC-1□□□□□ -2.57
COL6A5A8TX70 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1□□□□□ -2.57
COL6A5A8TX70 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-1□□□□□ -2.57
COL6A5A8TX70 AC108081.1-201ENST00000604358 221 ntBASIC-1□□□□□ -2.57
COL6A5A8TX70 RNU6-1010P-201ENST00000362757 107 ntBASIC-1.01□□□□□ -2.57
COL6A5A8TX70 RNY4P13-201ENST00000384284 96 ntBASIC-1.01□□□□□ -2.57
COL6A5A8TX70 RNU6-784P-201ENST00000384330 106 ntBASIC-1.01□□□□□ -2.57
COL6A5A8TX70 MIR186-201ENST00000384988 86 ntBASIC-1.01□□□□□ -2.57
COL6A5A8TX70 RNU6-519P-201ENST00000410590 108 ntBASIC-1.01□□□□□ -2.57
COL6A5A8TX70 MIR3192-201ENST00000584920 77 ntBASIC-1.01□□□□□ -2.57
COL6A5A8TX70 AC104996.3-201ENST00000590718 94 ntBASIC-1.01□□□□□ -2.57
COL6A5A8TX70 VN1R83P-201ENST00000595685 445 ntBASIC-1.01□□□□□ -2.57
COL6A5A8TX70 U7.6-201ENST00000610841 64 ntBASIC-1.01□□□□□ -2.57
COL6A5A8TX70 MIR6854-201ENST00000614935 69 ntBASIC-1.01□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms