Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 MIR3145-201ENST00000580727 82 ntBASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 AC012433.1-201ENST00000588916 398 ntBASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 MIR6873-201ENST00000622788 63 ntBASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
TCRBV7S3A2A0A539 RNU4-80P-201ENST00000363200 141 ntBASIC2.04□□□□□ -2.08
TCRBV7S3A2A0A539 SNORA67.1-201ENST00000364749 141 ntBASIC2.04□□□□□ -2.08
TCRBV7S3A2A0A539 Y_RNA.368-201ENST00000365547 113 ntBASIC2.04□□□□□ -2.08
TCRBV7S3A2A0A539 RNU6-301P-201ENST00000384277 107 ntBASIC2.04□□□□□ -2.08
TCRBV7S3A2A0A539 RNU6-417P-201ENST00000384712 107 ntBASIC2.04□□□□□ -2.08
TCRBV7S3A2A0A539 HMGN2P3-201ENST00000433603 273 ntBASIC2.04□□□□□ -2.08
TCRBV7S3A2A0A539 AC099677.2-201ENST00000436385 175 ntBASIC2.04□□□□□ -2.08
TCRBV7S3A2A0A539 HMGN2P5-201ENST00000436882 273 ntBASIC2.04□□□□□ -2.08
TCRBV7S3A2A0A539 MTND2P29-201ENST00000438595 412 ntBASIC2.04□□□□□ -2.08
TCRBV7S3A2A0A539 RPS27P22-201ENST00000478056 241 ntBASIC2.04□□□□□ -2.08
TCRBV7S3A2A0A539 YWHAEP4-201ENST00000505390 198 ntBASIC2.04□□□□□ -2.08
TCRBV7S3A2A0A539 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TCRBV7S3A2A0A539 AC024995.1-201ENST00000523014 93 ntBASIC2.04□□□□□ -2.08
TCRBV7S3A2A0A539 MIR4529-201ENST00000578110 78 ntBASIC2.04□□□□□ -2.08
TCRBV7S3A2A0A539 MIR5194-201ENST00000582634 120 ntBASIC2.04□□□□□ -2.08
TCRBV7S3A2A0A539 MIR4438-201ENST00000585271 93 ntBASIC2.04□□□□□ -2.08
TCRBV7S3A2A0A539 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 SNORA25.1-201ENST00000362326 128 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 RNU6-862P-201ENST00000362804 105 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 RNU1-22P-201ENST00000363334 158 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 RNA5SP393-201ENST00000363423 117 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 RNU6-407P-201ENST00000365280 104 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 Y_RNA.350-201ENST00000365409 98 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 RNU6-117P-201ENST00000365415 107 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 Y_RNA.352-201ENST00000365439 102 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 Y_RNA.456-201ENST00000384232 111 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 MIR597-201ENST00000384968 97 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 MIR524-201ENST00000385242 87 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 Y_RNA.618-201ENST00000410949 107 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 RPL39P38-201ENST00000467018 153 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 RPL36AP21-201ENST00000490372 323 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 AC091959.1-201ENST00000495857 238 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 AC097462.1-201ENST00000514125 324 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 RNU7-99P-201ENST00000516271 62 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 SNORA27.4-201ENST00000516650 95 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 SCARNA24.2-201ENST00000516968 130 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 RNU7-128P-201ENST00000517247 62 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 AC027419.1-201ENST00000522976 328 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 AC007229.1-201ENST00000590455 412 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 U6.108-201ENST00000637764 58 ntBASIC2.03□□□□□ -2.08
TCRBV7S3A2A0A539 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.310-201ENST00000365063 113 ntBASIC2.02□□□□□ -2.09
TCRBV7S3A2A0A539 MIR144-201ENST00000384886 86 ntBASIC2.02□□□□□ -2.09
TCRBV7S3A2A0A539 SNORD23.1-201ENST00000408212 104 ntBASIC2.02□□□□□ -2.09
TCRBV7S3A2A0A539 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
TCRBV7S3A2A0A539 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.02□□□□□ -2.09
TCRBV7S3A2A0A539 MTND1P19-201ENST00000511780 315 ntBASIC2.02□□□□□ -2.09
TCRBV7S3A2A0A539 RNU6-1337P-201ENST00000516525 95 ntBASIC2.02□□□□□ -2.09
TCRBV7S3A2A0A539 AC136628.3-201ENST00000521868 290 ntBASIC2.02□□□□□ -2.09
TCRBV7S3A2A0A539 RPL21P9-201ENST00000556149 474 ntBASIC2.02□□□□□ -2.09
TCRBV7S3A2A0A539 AL359075.3-201ENST00000613288 217 ntBASIC2.02□□□□□ -2.09
TCRBV7S3A2A0A539 U2.14-201ENST00000615943 113 ntBASIC2.02□□□□□ -2.09
TCRBV7S3A2A0A539 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TCRBV7S3A2A0A539 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.02□□□□□ -2.09
TCRBV7S3A2A0A539 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.02□□□□□ -2.09
TCRBV7S3A2A0A539 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
TCRBV7S3A2A0A539 AP006437.1-201ENST00000641440 3685 ntBASIC2.02□□□□□ -2.09
TCRBV7S3A2A0A539 RNU6-514P-201ENST00000384208 107 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.478-201ENST00000384358 107 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 SNORA48.1-201ENST00000390879 135 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 RNA5SP467-201ENST00000391274 118 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 SNORD58.1-201ENST00000391313 66 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 MIR548H3-201ENST00000408771 118 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 RNA5SP450-201ENST00000411206 102 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 Z98742.3-201ENST00000418637 326 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 EBAG9P1-201ENST00000418955 543 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 OOSP1P1-201ENST00000423265 274 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 AL135790.2-201ENST00000437701 267 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 RPS26P45-201ENST00000471748 340 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 AC055731.1-201ENST00000474387 401 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 HMGB3P3-201ENST00000510526 400 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 RNU2-19P-201ENST00000517288 84 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 IGLV3-17-201ENST00000519099 244 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 AP005660.1-201ENST00000522972 293 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 AL512605.2-201ENST00000592972 256 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 AL078604.3-201ENST00000615580 211 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.01□□□□□ -2.09
TCRBV7S3A2A0A539 MIR449A-201ENST00000362113 91 ntBASIC2□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.44-201ENST00000362676 108 ntBASIC2□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.217-201ENST00000364214 105 ntBASIC2□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.275-201ENST00000364726 110 ntBASIC2□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.307-201ENST00000365022 117 ntBASIC2□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.341-201ENST00000365341 102 ntBASIC2□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.416-201ENST00000384014 113 ntBASIC2□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.447-201ENST00000384184 113 ntBASIC2□□□□□ -2.09
TCRBV7S3A2A0A539 AL445646.1-201ENST00000431784 216 ntBASIC2□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.641-201ENST00000459414 105 ntBASIC2□□□□□ -2.09
TCRBV7S3A2A0A539 AC008413.1-201ENST00000511864 177 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms