Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AL049779.4-201ENST00000604500 156 ntBASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 MIR338-201ENST00000636369 67 ntBASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC163A0A0D9SF12 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC163A0A0D9SF12 RNU1-112P-201ENST00000364401 164 ntBASIC2.77□□□□□ -1.97
CCDC163A0A0D9SF12 Y_RNA.297-201ENST00000364950 91 ntBASIC2.77□□□□□ -1.97
CCDC163A0A0D9SF12 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC163A0A0D9SF12 SNORA72.4-201ENST00000384174 132 ntBASIC2.77□□□□□ -1.97
CCDC163A0A0D9SF12 SNORD58.1-201ENST00000391313 66 ntBASIC2.77□□□□□ -1.97
CCDC163A0A0D9SF12 RN7SKP192-201ENST00000411291 327 ntBASIC2.77□□□□□ -1.97
CCDC163A0A0D9SF12 BMS1P22-201ENST00000414726 313 ntBASIC2.77□□□□□ -1.97
CCDC163A0A0D9SF12 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC163A0A0D9SF12 RNU6-1278P-201ENST00000516130 107 ntBASIC2.77□□□□□ -1.97
CCDC163A0A0D9SF12 RNY3P16-201ENST00000516338 101 ntBASIC2.77□□□□□ -1.97
CCDC163A0A0D9SF12 AC024405.2-202ENST00000532731 184 ntBASIC2.77□□□□□ -1.97
CCDC163A0A0D9SF12 SNORD53-201ENST00000579969 78 ntBASIC2.77□□□□□ -1.97
CCDC163A0A0D9SF12 MIR4282-201ENST00000583613 67 ntBASIC2.77□□□□□ -1.97
CCDC163A0A0D9SF12 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC163A0A0D9SF12 U6.73-201ENST00000619194 103 ntBASIC2.77□□□□□ -1.97
CCDC163A0A0D9SF12 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 RNU1-58P-201ENST00000362413 163 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 RNA5SP383-201ENST00000362934 120 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 RNU1-22P-201ENST00000363334 158 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 Y_RNA.274-201ENST00000364714 101 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 RNU6-200P-201ENST00000364743 107 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 Y_RNA.308-201ENST00000365043 101 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 MIR504-201ENST00000385065 83 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 RN7SKP58-201ENST00000411010 305 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 EBAG9P1-201ENST00000418955 543 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 RPS15AP28-201ENST00000435088 386 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 RNU7-141P-201ENST00000459304 62 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 RN7SL636P-201ENST00000497504 294 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 AC097462.1-201ENST00000514125 324 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 RNU1-142P-201ENST00000516682 145 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 MIR5692C2-201ENST00000577959 77 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 MIR3169-201ENST00000578032 83 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 AC007229.1-201ENST00000590455 412 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 AL365265.1-201ENST00000621045 234 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 CTSLP2-204ENST00000629029 392 ntBASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC163A0A0D9SF12 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 RNU6-899P-201ENST00000363947 107 ntBASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 RNU6-923P-201ENST00000364753 107 ntBASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 U8.7-201ENST00000364940 136 ntBASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 RNY4P28-201ENST00000365281 93 ntBASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 MIR597-201ENST00000384968 97 ntBASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 AL139156.1-201ENST00000412785 841 ntBASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 AL353689.1-201ENST00000438895 199 ntBASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 RNA5SP148-201ENST00000516527 94 ntBASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 RNU7-193P-201ENST00000516723 65 ntBASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 POLR3GP1-201ENST00000594073 261 ntBASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 AC073413.2-201ENST00000604332 360 ntBASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 AC005972.2-201ENST00000604690 348 ntBASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 AC004832.4-201ENST00000608952 331 ntBASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 AC013791.1-201ENST00000616619 62 ntBASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.75□□□□□ -1.97
CCDC163A0A0D9SF12 MIR148B-201ENST00000362252 99 ntBASIC2.74□□□□□ -1.97
CCDC163A0A0D9SF12 RNU1-96P-201ENST00000364163 162 ntBASIC2.74□□□□□ -1.97
CCDC163A0A0D9SF12 RNY1-201ENST00000364228 113 ntBASIC2.74□□□□□ -1.97
CCDC163A0A0D9SF12 RNU4-10P-201ENST00000364383 140 ntBASIC2.74□□□□□ -1.97
CCDC163A0A0D9SF12 SNORA8-201ENST00000384574 139 ntBASIC2.74□□□□□ -1.97
CCDC163A0A0D9SF12 SNORD23.1-201ENST00000408212 104 ntBASIC2.74□□□□□ -1.97
CCDC163A0A0D9SF12 snoU13.26-201ENST00000459452 105 ntBASIC2.74□□□□□ -1.97
CCDC163A0A0D9SF12 AC008413.1-201ENST00000511864 177 ntBASIC2.74□□□□□ -1.97
CCDC163A0A0D9SF12 RNA5SP282-201ENST00000516355 108 ntBASIC2.74□□□□□ -1.97
CCDC163A0A0D9SF12 RNA5SP137-201ENST00000516833 135 ntBASIC2.74□□□□□ -1.97
CCDC163A0A0D9SF12 AL359075.3-201ENST00000613288 217 ntBASIC2.74□□□□□ -1.97
CCDC163A0A0D9SF12 AC012640.5-201ENST00000623897 319 ntBASIC2.74□□□□□ -1.97
CCDC163A0A0D9SF12 AC010297.1-201ENST00000623948 149 ntBASIC2.74□□□□□ -1.97
CCDC163A0A0D9SF12 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC163A0A0D9SF12 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC163A0A0D9SF12 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC163A0A0D9SF12 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC163A0A0D9SF12 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC163A0A0D9SF12 MIR26A1-201ENST00000362205 77 ntBASIC2.73□□□□□ -1.97
CCDC163A0A0D9SF12 RNU6-1205P-201ENST00000363625 106 ntBASIC2.73□□□□□ -1.97
CCDC163A0A0D9SF12 SNORA33-201ENST00000363664 130 ntBASIC2.73□□□□□ -1.97
CCDC163A0A0D9SF12 MIR512-1-201ENST00000384913 84 ntBASIC2.73□□□□□ -1.97
CCDC163A0A0D9SF12 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC163A0A0D9SF12 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC163A0A0D9SF12 Z98949.2-201ENST00000440996 144 ntBASIC2.73□□□□□ -1.97
CCDC163A0A0D9SF12 SNORD2.1-201ENST00000458762 69 ntBASIC2.73□□□□□ -1.97
CCDC163A0A0D9SF12 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC163A0A0D9SF12 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC163A0A0D9SF12 SNORA31.15-201ENST00000516771 132 ntBASIC2.73□□□□□ -1.97
CCDC163A0A0D9SF12 MIR7843-201ENST00000622274 79 ntBASIC2.73□□□□□ -1.97
CCDC163A0A0D9SF12 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 MIR411-201ENST00000362239 96 ntBASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 Y_RNA.262-201ENST00000364641 102 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms