Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC023442.1-201ENST00000531247 422 ntBASIC0.99□□□□□ -2.25
TRAV40A0A0B4J280 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.99□□□□□ -2.25
TRAV40A0A0B4J280 AL442163.3-201ENST00000554110 156 ntBASIC0.99□□□□□ -2.25
TRAV40A0A0B4J280 AC080078.3-201ENST00000605407 463 ntBASIC0.99□□□□□ -2.25
TRAV40A0A0B4J280 U6.73-201ENST00000619194 103 ntBASIC0.99□□□□□ -2.25
TRAV40A0A0B4J280 AC073544.1-201ENST00000600110 1595 ntBASIC0.99□□□□□ -2.25
TRAV40A0A0B4J280 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 Y_RNA.5-201ENST00000362334 102 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 RNU6-1115P-201ENST00000362490 106 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 Y_RNA.101-201ENST00000363154 102 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 Y_RNA.172-201ENST00000363765 102 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 Y_RNA.394-201ENST00000383942 103 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 Y_RNA.498-201ENST00000384460 102 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 RNU6-136P-201ENST00000384663 107 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 MIR194-1-201ENST00000384892 85 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 SNORA69.1-201ENST00000390904 137 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 Y_RNA.579-201ENST00000390939 94 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 RNU6-1009P-201ENST00000390996 107 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 RNA5SP323-201ENST00000391094 133 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 MTND4P28-201ENST00000426217 387 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 AC093019.1-201ENST00000443135 252 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 NDUFB4P10-201ENST00000452541 359 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 RNU6-625P-201ENST00000459412 107 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 AC068338.1-201ENST00000565567 176 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 MIR4438-201ENST00000585271 93 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 AL133255.1-201ENST00000606374 441 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 MIR8074-201ENST00000615081 81 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 U6.115-201ENST00000636045 103 ntBASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.98□□□□□ -2.25
TRAV40A0A0B4J280 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 AC091812.1-201ENST00000432235 1948 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 MIR302D-201ENST00000362275 68 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 RNU4-79P-201ENST00000362764 141 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 RNU6-1264P-201ENST00000383891 107 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 RNU6-1040P-201ENST00000383974 107 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 MIR1276-201ENST00000408707 83 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 AC015922.2-201ENST00000435593 184 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 RPEP5-201ENST00000441137 268 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 RPS29P29-201ENST00000456396 171 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 snoU13.27-201ENST00000459278 104 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 RPS27P22-201ENST00000478056 241 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 AC010655.3-201ENST00000478818 450 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 AC093852.1-201ENST00000503587 266 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 RNU6-264P-201ENST00000517134 104 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 AC019176.1-201ENST00000518519 225 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 MIR4285-201ENST00000581001 85 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 AL390123.1-201ENST00000603216 237 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 SNORD58B-201ENST00000607313 66 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 MIR8063-201ENST00000621930 81 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.97□□□□□ -2.25
TRAV40A0A0B4J280 RNU1-22P-201ENST00000363334 158 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 SNORD1A-201ENST00000364968 72 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 RNU6-407P-201ENST00000365280 104 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 Y_RNA.384-201ENST00000383909 102 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 MIR30A-201ENST00000385092 71 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 RNU6-360P-201ENST00000390944 104 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 RNU6-308P-201ENST00000390957 107 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 Y_RNA.605-201ENST00000410577 105 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 RNU6-1199P-201ENST00000411249 104 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 AC008134.1-201ENST00000420943 193 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 AC018865.2-201ENST00000423631 129 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 MTND1P14-201ENST00000427400 950 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 TOMM22P2-201ENST00000430735 237 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 JTBP1-201ENST00000441314 247 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 MRPS10P1-201ENST00000448483 130 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 AC074290.1-201ENST00000448883 135 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 RNU7-152P-201ENST00000458982 64 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 RPS26P45-201ENST00000471748 340 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 AC027575.1-201ENST00000481064 460 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 AC025465.3-201ENST00000510570 311 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 MTND3P22-201ENST00000510932 243 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 RN7SKP179-201ENST00000516126 217 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 RNU1-142P-201ENST00000516682 145 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 RNU4-77P-201ENST00000516692 156 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 AL117336.2-201ENST00000602435 335 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 AC021506.2-201ENST00000612354 169 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 AL359075.3-201ENST00000613288 217 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 AC004467.1-201ENST00000615678 330 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 MIR8054-201ENST00000620877 86 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 AC091925.1-201ENST00000623204 462 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 AL359697.1-201ENST00000624879 587 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 U6.92-201ENST00000636464 89 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 MIR3674-201ENST00000636576 68 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 MTND4P29-201ENST00000503122 1372 ntBASIC0.96□□□□□ -2.26
TRAV40A0A0B4J280 AC018630.2-201ENST00000534866 2403 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 Y_RNA.31-201ENST00000362574 102 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 RNU6-490P-201ENST00000362985 107 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms