Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 RNA5SP482-201ENST00000391269 118 ntBASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 MTATP6P13-201ENST00000438531 667 ntBASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 RPS27P22-201ENST00000478056 241 ntBASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC097462.1-201ENST00000514125 324 ntBASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 RNU6-947P-201ENST00000516264 106 ntBASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 RNU6-341P-201ENST00000516973 96 ntBASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 AL358944.1-201ENST00000528537 144 ntBASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC011604.1-201ENST00000545978 196 ntBASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC024909.2-201ENST00000553035 286 ntBASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC090617.3-201ENST00000573670 475 ntBASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 MIR4778-201ENST00000577635 80 ntBASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 MIR3672-201ENST00000584290 82 ntBASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 SNORA4-201ENST00000584302 138 ntBASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC100812.1-201ENST00000607622 580 ntBASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 AP000568.1-201ENST00000282964 442 ntBASIC0.72□□□□□ -2.29
COMMD3-BMI1R4GMX3 Y_RNA.51-201ENST00000362725 102 ntBASIC0.72□□□□□ -2.29
COMMD3-BMI1R4GMX3 RNU6-595P-201ENST00000363944 107 ntBASIC0.72□□□□□ -2.29
COMMD3-BMI1R4GMX3 RNU6-1013P-201ENST00000384180 107 ntBASIC0.72□□□□□ -2.29
COMMD3-BMI1R4GMX3 RNU6-424P-201ENST00000384367 105 ntBASIC0.72□□□□□ -2.29
COMMD3-BMI1R4GMX3 MIR181A1-201ENST00000385026 110 ntBASIC0.72□□□□□ -2.29
COMMD3-BMI1R4GMX3 SNORA12.1-201ENST00000390873 148 ntBASIC0.72□□□□□ -2.29
COMMD3-BMI1R4GMX3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
COMMD3-BMI1R4GMX3 RNA5SP118-201ENST00000410385 109 ntBASIC0.72□□□□□ -2.29
COMMD3-BMI1R4GMX3 RPS3AP1-201ENST00000413190 320 ntBASIC0.72□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC009161.1-201ENST00000417306 376 ntBASIC0.72□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.72□□□□□ -2.29
COMMD3-BMI1R4GMX3 AL590632.1-201ENST00000424289 371 ntBASIC0.72□□□□□ -2.29
COMMD3-BMI1R4GMX3 STAG3L5P-204ENST00000443759 179 ntBASIC0.72□□□□□ -2.29
COMMD3-BMI1R4GMX3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.72□□□□□ -2.29
COMMD3-BMI1R4GMX3 SNORD79.1-201ENST00000516069 84 ntBASIC0.72□□□□□ -2.29
COMMD3-BMI1R4GMX3 AP002004.2-201ENST00000531656 154 ntBASIC0.72□□□□□ -2.29
COMMD3-BMI1R4GMX3 MIR4698-201ENST00000577795 80 ntBASIC0.72□□□□□ -2.29
COMMD3-BMI1R4GMX3 SNORD114-7-201ENST00000362520 77 ntBASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNU6-727P-201ENST00000363592 107 ntBASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 Y_RNA.265-201ENST00000364677 108 ntBASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNU6-1264P-201ENST00000383891 107 ntBASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 MTND5P15-201ENST00000434246 349 ntBASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 AP000870.1-201ENST00000472927 406 ntBASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 AC010469.2-201ENST00000496412 480 ntBASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 AC022493.2-201ENST00000506122 481 ntBASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 AC074133.1-201ENST00000515696 183 ntBASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNU2-56P-201ENST00000516826 190 ntBASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 Y_RNA.706-201ENST00000516933 99 ntBASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNU7-172P-201ENST00000517125 64 ntBASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 MTND2P38-201ENST00000522536 667 ntBASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 AC109635.3-201ENST00000529536 185 ntBASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 UBL5P4-201ENST00000562584 236 ntBASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.71□□□□□ -2.3
COMMD3-BMI1R4GMX3 MIR410-201ENST00000362222 80 ntBASIC0.7□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNU6-281P-201ENST00000384212 103 ntBASIC0.7□□□□□ -2.3
COMMD3-BMI1R4GMX3 MIR520E-201ENST00000384867 87 ntBASIC0.7□□□□□ -2.3
COMMD3-BMI1R4GMX3 MIR942-201ENST00000401111 86 ntBASIC0.7□□□□□ -2.3
COMMD3-BMI1R4GMX3 RPL30P16-201ENST00000419341 429 ntBASIC0.7□□□□□ -2.3
COMMD3-BMI1R4GMX3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.7□□□□□ -2.3
COMMD3-BMI1R4GMX3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.7□□□□□ -2.3
COMMD3-BMI1R4GMX3 UBE2V1P7-201ENST00000446395 340 ntBASIC0.7□□□□□ -2.3
COMMD3-BMI1R4GMX3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.7□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNU6-1278P-201ENST00000516130 107 ntBASIC0.7□□□□□ -2.3
COMMD3-BMI1R4GMX3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.7□□□□□ -2.3
COMMD3-BMI1R4GMX3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.7□□□□□ -2.3
COMMD3-BMI1R4GMX3 MIR3973-201ENST00000579824 107 ntBASIC0.7□□□□□ -2.3
COMMD3-BMI1R4GMX3 MIR151B-201ENST00000584249 96 ntBASIC0.7□□□□□ -2.3
COMMD3-BMI1R4GMX3 MIR6788-201ENST00000618842 66 ntBASIC0.7□□□□□ -2.3
COMMD3-BMI1R4GMX3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.7□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNU6-1252P-201ENST00000363054 104 ntBASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 MIR520G-201ENST00000385064 90 ntBASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 SNORD41-201ENST00000386967 70 ntBASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNU6-332P-201ENST00000391193 108 ntBASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 USP9YP16-201ENST00000430287 407 ntBASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 USP9YP23-201ENST00000455085 407 ntBASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 RPS29P1-201ENST00000465274 159 ntBASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 OR9P1P-201ENST00000496431 281 ntBASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 SNORA70.12-201ENST00000516084 153 ntBASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNU6-864P-201ENST00000516256 108 ntBASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNU6-506P-201ENST00000516553 94 ntBASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 Y_RNA.704-201ENST00000516851 102 ntBASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNU1-54P-201ENST00000517181 120 ntBASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 AC091144.1-201ENST00000519573 138 ntBASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 AC004817.2-201ENST00000561794 651 ntBASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 AC080078.2-201ENST00000603766 501 ntBASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
COMMD3-BMI1R4GMX3 Y_RNA.402-201ENST00000383972 102 ntBASIC0.68□□□□□ -2.3
COMMD3-BMI1R4GMX3 Y_RNA.405-201ENST00000383979 100 ntBASIC0.68□□□□□ -2.3
COMMD3-BMI1R4GMX3 Y_RNA.451-201ENST00000384200 100 ntBASIC0.68□□□□□ -2.3
COMMD3-BMI1R4GMX3 Y_RNA.524-201ENST00000384564 100 ntBASIC0.68□□□□□ -2.3
COMMD3-BMI1R4GMX3 Y_RNA.561-201ENST00000384694 100 ntBASIC0.68□□□□□ -2.3
COMMD3-BMI1R4GMX3 AL355796.1-201ENST00000406706 323 ntBASIC0.68□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.68□□□□□ -2.3
COMMD3-BMI1R4GMX3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.68□□□□□ -2.3
COMMD3-BMI1R4GMX3 MTND3P23-201ENST00000431980 347 ntBASIC0.68□□□□□ -2.3
COMMD3-BMI1R4GMX3 AC023157.2-201ENST00000540596 141 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms