Protein–RNA interactions for Protein: Q9Y5I3

PCDHA1, Protocadherin alpha-1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1Q9Y5I3 RNA5SP137-201ENST00000516833 135 ntBASIC2.5□□□□□ -2.01
PCDHA1Q9Y5I3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDHA1Q9Y5I3 AC110588.1-201ENST00000559699 137 ntBASIC2.5□□□□□ -2.01
PCDHA1Q9Y5I3 MIR3126-201ENST00000577443 74 ntBASIC2.5□□□□□ -2.01
PCDHA1Q9Y5I3 MIR3671-201ENST00000580455 88 ntBASIC2.5□□□□□ -2.01
PCDHA1Q9Y5I3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.5□□□□□ -2.01
PCDHA1Q9Y5I3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.5□□□□□ -2.01
PCDHA1Q9Y5I3 Y_RNA.329-201ENST00000365209 107 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 Y_RNA.352-201ENST00000365439 102 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 SNORA67.3-201ENST00000384366 140 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 RNU6-160P-201ENST00000384591 107 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 RNU6-1248P-201ENST00000391096 64 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 AL355796.1-201ENST00000406706 323 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 MTCO1P5-201ENST00000433573 344 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 SNORA70.12-201ENST00000516084 153 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 SCARNA24.2-201ENST00000516968 130 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 U2.15-201ENST00000611544 191 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 U2.16-201ENST00000613119 191 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 U2.12-201ENST00000613778 191 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 U2.20-201ENST00000613956 192 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 U2.9-201ENST00000615427 191 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 U2.11-201ENST00000616345 191 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 U2.2-201ENST00000616535 191 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 U2.3-201ENST00000617785 191 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 U2.19-201ENST00000618602 191 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 RNU2-1-201ENST00000618664 191 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 U2.6-201ENST00000619225 191 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 U2.5-201ENST00000619465 191 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 U2.10-201ENST00000620268 191 ntBASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PCDHA1Q9Y5I3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 RNU6-324P-201ENST00000363957 106 ntBASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 SNORD114-6-201ENST00000364393 72 ntBASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 SNORA20B-201ENST00000384220 132 ntBASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 MIR29C-201ENST00000385231 88 ntBASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 AL023284.1-201ENST00000403956 276 ntBASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 RNU2-61P-201ENST00000411069 191 ntBASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 AC060773.1-201ENST00000421698 310 ntBASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 AC024067.1-201ENST00000426199 223 ntBASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 AL353689.1-201ENST00000438895 199 ntBASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 MRPS10P1-201ENST00000448483 130 ntBASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 MTND1P19-201ENST00000511780 315 ntBASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 RNU6-1023P-201ENST00000516137 106 ntBASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 RNU6-1271P-201ENST00000517049 105 ntBASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 SUMO2P18-201ENST00000518873 252 ntBASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 MIR4446-201ENST00000578505 67 ntBASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 DEFB117-201ENST00000602356 141 ntBASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
PCDHA1Q9Y5I3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 SNORA25.1-201ENST00000362326 128 ntBASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 RNU6-271P-201ENST00000363858 105 ntBASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 Y_RNA.416-201ENST00000384014 113 ntBASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 Y_RNA.489-201ENST00000384410 101 ntBASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 SNORA48.3-201ENST00000391081 134 ntBASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 MIR873-201ENST00000401120 77 ntBASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 RNU6-710P-201ENST00000410424 105 ntBASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 CR769767.1-201ENST00000436337 346 ntBASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 SNORA27.4-201ENST00000516650 95 ntBASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 MIR3128-201ENST00000581957 66 ntBASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 AL137847.3-201ENST00000611521 109 ntBASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 AC022202.1-201ENST00000613515 211 ntBASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 MIR219B-201ENST00000637023 88 ntBASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PCDHA1Q9Y5I3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
PCDHA1Q9Y5I3 UBE2WP1-201ENST00000362030 340 ntBASIC2.46□□□□□ -2.02
PCDHA1Q9Y5I3 Y_RNA.20-201ENST00000362479 113 ntBASIC2.46□□□□□ -2.02
PCDHA1Q9Y5I3 SNORA27.1-201ENST00000362604 124 ntBASIC2.46□□□□□ -2.02
PCDHA1Q9Y5I3 RNU6-514P-201ENST00000384208 107 ntBASIC2.46□□□□□ -2.02
PCDHA1Q9Y5I3 Y_RNA.476-201ENST00000384347 108 ntBASIC2.46□□□□□ -2.02
PCDHA1Q9Y5I3 SNORA40.19-201ENST00000390846 128 ntBASIC2.46□□□□□ -2.02
PCDHA1Q9Y5I3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.46□□□□□ -2.02
PCDHA1Q9Y5I3 RNU6-191P-201ENST00000516295 94 ntBASIC2.46□□□□□ -2.02
PCDHA1Q9Y5I3 Y_RNA.680-201ENST00000516441 93 ntBASIC2.46□□□□□ -2.02
PCDHA1Q9Y5I3 U2.14-201ENST00000615943 113 ntBASIC2.46□□□□□ -2.02
PCDHA1Q9Y5I3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.46□□□□□ -2.02
PCDHA1Q9Y5I3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCDHA1Q9Y5I3 Y_RNA.44-201ENST00000362676 108 ntBASIC2.45□□□□□ -2.02
PCDHA1Q9Y5I3 RNU4-80P-201ENST00000363200 141 ntBASIC2.45□□□□□ -2.02
PCDHA1Q9Y5I3 SNORD58.1-201ENST00000391313 66 ntBASIC2.45□□□□□ -2.02
PCDHA1Q9Y5I3 AL603910.2-201ENST00000407268 136 ntBASIC2.45□□□□□ -2.02
PCDHA1Q9Y5I3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.45□□□□□ -2.02
PCDHA1Q9Y5I3 RPL23AP7-203ENST00000449021 469 ntBASIC2.45□□□□□ -2.02
PCDHA1Q9Y5I3 UBL5P3-201ENST00000475112 231 ntBASIC2.45□□□□□ -2.02
PCDHA1Q9Y5I3 AC091959.1-201ENST00000495857 238 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms