Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.91□□□□□ -1.94
CTDP1Q9Y5B0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CTDP1Q9Y5B0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
CTDP1Q9Y5B0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
CTDP1Q9Y5B0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.9□□□□□ -1.94
CTDP1Q9Y5B0 RNU6-653P-201ENST00000363074 106 ntBASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 RNU6-486P-201ENST00000363116 107 ntBASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 RNU6-187P-201ENST00000384139 106 ntBASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 Y_RNA.506-201ENST00000384494 102 ntBASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 MIR548B-201ENST00000385247 97 ntBASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 AL357139.1-201ENST00000407792 426 ntBASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 AC091021.1-201ENST00000468051 388 ntBASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 RNU6-1219P-201ENST00000516143 112 ntBASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 RNA5SP24-201ENST00000516478 95 ntBASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 RNU6-1098P-201ENST00000516772 96 ntBASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 MRPS18CP4-201ENST00000535821 231 ntBASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 AC021753.1-201ENST00000635724 168 ntBASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 U2.22-201ENST00000636441 106 ntBASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CTDP1Q9Y5B0 Y_RNA.243-201ENST00000364481 109 ntBASIC2.89□□□□□ -1.95
CTDP1Q9Y5B0 RNU6-125P-201ENST00000384505 107 ntBASIC2.89□□□□□ -1.95
CTDP1Q9Y5B0 RNU6-763P-201ENST00000390865 106 ntBASIC2.89□□□□□ -1.95
CTDP1Q9Y5B0 AL590004.2-201ENST00000404787 371 ntBASIC2.89□□□□□ -1.95
CTDP1Q9Y5B0 RNU6-710P-201ENST00000410424 105 ntBASIC2.89□□□□□ -1.95
CTDP1Q9Y5B0 Y_RNA.637-201ENST00000459424 114 ntBASIC2.89□□□□□ -1.95
CTDP1Q9Y5B0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.89□□□□□ -1.95
CTDP1Q9Y5B0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.89□□□□□ -1.95
CTDP1Q9Y5B0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.89□□□□□ -1.95
CTDP1Q9Y5B0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.89□□□□□ -1.95
CTDP1Q9Y5B0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.89□□□□□ -1.95
CTDP1Q9Y5B0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CTDP1Q9Y5B0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.88□□□□□ -1.95
CTDP1Q9Y5B0 SNORA70B-201ENST00000384210 135 ntBASIC2.88□□□□□ -1.95
CTDP1Q9Y5B0 MIR586-201ENST00000385035 97 ntBASIC2.88□□□□□ -1.95
CTDP1Q9Y5B0 MIR1294-201ENST00000408503 142 ntBASIC2.88□□□□□ -1.95
CTDP1Q9Y5B0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
CTDP1Q9Y5B0 RN7SL636P-201ENST00000497504 294 ntBASIC2.88□□□□□ -1.95
CTDP1Q9Y5B0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.88□□□□□ -1.95
CTDP1Q9Y5B0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.88□□□□□ -1.95
CTDP1Q9Y5B0 RNA5SP82-201ENST00000516707 92 ntBASIC2.88□□□□□ -1.95
CTDP1Q9Y5B0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.88□□□□□ -1.95
CTDP1Q9Y5B0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.88□□□□□ -1.95
CTDP1Q9Y5B0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.87□□□□□ -1.95
CTDP1Q9Y5B0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTDP1Q9Y5B0 AL157777.2-201ENST00000258070 137 ntBASIC2.87□□□□□ -1.95
CTDP1Q9Y5B0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTDP1Q9Y5B0 U8.2-201ENST00000363156 134 ntBASIC2.87□□□□□ -1.95
CTDP1Q9Y5B0 Y_RNA.170-201ENST00000363746 110 ntBASIC2.87□□□□□ -1.95
CTDP1Q9Y5B0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.87□□□□□ -1.95
CTDP1Q9Y5B0 U8.19-201ENST00000459095 133 ntBASIC2.87□□□□□ -1.95
CTDP1Q9Y5B0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.87□□□□□ -1.95
CTDP1Q9Y5B0 MIR449C-201ENST00000516047 92 ntBASIC2.87□□□□□ -1.95
CTDP1Q9Y5B0 AC136628.3-201ENST00000521868 290 ntBASIC2.87□□□□□ -1.95
CTDP1Q9Y5B0 AC021269.2-201ENST00000532318 330 ntBASIC2.87□□□□□ -1.95
CTDP1Q9Y5B0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.87□□□□□ -1.95
CTDP1Q9Y5B0 MIR5092-201ENST00000583139 88 ntBASIC2.87□□□□□ -1.95
CTDP1Q9Y5B0 AC104465.1-201ENST00000611365 139 ntBASIC2.87□□□□□ -1.95
CTDP1Q9Y5B0 U6.115-201ENST00000636045 103 ntBASIC2.87□□□□□ -1.95
CTDP1Q9Y5B0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTDP1Q9Y5B0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 Y_RNA.8-201ENST00000362353 102 ntBASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 RNU6-801P-201ENST00000364087 105 ntBASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 SNORD114-30-201ENST00000364448 72 ntBASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 RNU4-17P-201ENST00000365598 141 ntBASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 RNU6-804P-201ENST00000384286 107 ntBASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 SNORA19-201ENST00000384737 128 ntBASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 Y_RNA.571-201ENST00000384753 98 ntBASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 RNU6-855P-201ENST00000410395 104 ntBASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 RNU4-53P-201ENST00000410828 140 ntBASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 AC003685.2-201ENST00000422795 395 ntBASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 CR769767.1-201ENST00000436337 346 ntBASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 RNU7-14P-201ENST00000459331 62 ntBASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 MIR3910-1-201ENST00000580936 111 ntBASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 AC105245.1-201ENST00000581934 244 ntBASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 AL078604.3-201ENST00000615580 211 ntBASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 U4atac.1-201ENST00000618345 95 ntBASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CTDP1Q9Y5B0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CTDP1Q9Y5B0 RNA5SP289-201ENST00000362332 137 ntBASIC2.85□□□□□ -1.95
CTDP1Q9Y5B0 Y_RNA.7-201ENST00000362352 102 ntBASIC2.85□□□□□ -1.95
CTDP1Q9Y5B0 Y_RNA.287-201ENST00000364853 94 ntBASIC2.85□□□□□ -1.95
CTDP1Q9Y5B0 RNU6-1274P-201ENST00000384557 107 ntBASIC2.85□□□□□ -1.95
CTDP1Q9Y5B0 MIR518C-201ENST00000384822 101 ntBASIC2.85□□□□□ -1.95
CTDP1Q9Y5B0 MIR592-201ENST00000384959 97 ntBASIC2.85□□□□□ -1.95
CTDP1Q9Y5B0 SNORA26.5-201ENST00000391215 123 ntBASIC2.85□□□□□ -1.95
CTDP1Q9Y5B0 MIR300-201ENST00000401138 83 ntBASIC2.85□□□□□ -1.95
CTDP1Q9Y5B0 AL359511.1-201ENST00000402970 211 ntBASIC2.85□□□□□ -1.95
CTDP1Q9Y5B0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.85□□□□□ -1.95
CTDP1Q9Y5B0 AL135790.2-201ENST00000437701 267 ntBASIC2.85□□□□□ -1.95
CTDP1Q9Y5B0 AC074290.1-201ENST00000448883 135 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms