Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 Y_RNA.715-201ENST00000517082 110 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.721-201ENST00000517207 102 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.772-201ENST00000606692 102 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.812-201ENST00000610788 101 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.784-201ENST00000613803 101 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.86□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.787-201ENST00000616522 101 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.780-201ENST00000617336 101 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.801-201ENST00000619005 101 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 AC091932.3-201ENST00000624223 323 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
YIPF1Q9Y548 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.86□□□□□ -2.11
YIPF1Q9Y548 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
YIPF1Q9Y548 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.101-201ENST00000363154 102 ntBASIC1.85□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.143-201ENST00000363520 106 ntBASIC1.85□□□□□ -2.11
YIPF1Q9Y548 RNA5SP138-201ENST00000365098 114 ntBASIC1.85□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.439-201ENST00000384119 94 ntBASIC1.85□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.455-201ENST00000384230 98 ntBASIC1.85□□□□□ -2.11
YIPF1Q9Y548 AL590004.1-201ENST00000405321 300 ntBASIC1.85□□□□□ -2.11
YIPF1Q9Y548 MIR1252-201ENST00000408861 65 ntBASIC1.85□□□□□ -2.11
YIPF1Q9Y548 RNA5SP501-201ENST00000410990 112 ntBASIC1.85□□□□□ -2.11
YIPF1Q9Y548 HMGN2P38-201ENST00000423806 265 ntBASIC1.85□□□□□ -2.11
YIPF1Q9Y548 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
YIPF1Q9Y548 AL353689.1-201ENST00000438895 199 ntBASIC1.85□□□□□ -2.11
YIPF1Q9Y548 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.85□□□□□ -2.11
YIPF1Q9Y548 SNORD65B-201ENST00000459126 73 ntBASIC1.85□□□□□ -2.11
YIPF1Q9Y548 RNVU1-2-201ENST00000516326 135 ntBASIC1.85□□□□□ -2.11
YIPF1Q9Y548 SUMO2P18-201ENST00000518873 252 ntBASIC1.85□□□□□ -2.11
YIPF1Q9Y548 AC027419.1-201ENST00000522976 328 ntBASIC1.85□□□□□ -2.11
YIPF1Q9Y548 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.85□□□□□ -2.11
YIPF1Q9Y548 AL442663.2-201ENST00000554385 511 ntBASIC1.85□□□□□ -2.11
YIPF1Q9Y548 AC005176.2-201ENST00000596933 147 ntBASIC1.85□□□□□ -2.11
YIPF1Q9Y548 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.85□□□□□ -2.11
YIPF1Q9Y548 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
YIPF1Q9Y548 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
YIPF1Q9Y548 RNU6-457P-201ENST00000363999 107 ntBASIC1.84□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.287-201ENST00000364853 94 ntBASIC1.84□□□□□ -2.11
YIPF1Q9Y548 SNORA72.2-201ENST00000365028 127 ntBASIC1.84□□□□□ -2.11
YIPF1Q9Y548 RNU6-417P-201ENST00000384712 107 ntBASIC1.84□□□□□ -2.11
YIPF1Q9Y548 AL117342.1-201ENST00000404861 406 ntBASIC1.84□□□□□ -2.11
YIPF1Q9Y548 MIR1253-201ENST00000408273 105 ntBASIC1.84□□□□□ -2.11
YIPF1Q9Y548 AC008134.1-201ENST00000420943 193 ntBASIC1.84□□□□□ -2.11
YIPF1Q9Y548 AC099677.2-201ENST00000436385 175 ntBASIC1.84□□□□□ -2.11
YIPF1Q9Y548 HMGN2P34-201ENST00000437647 269 ntBASIC1.84□□□□□ -2.11
YIPF1Q9Y548 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.84□□□□□ -2.11
YIPF1Q9Y548 MIR4255-201ENST00000579351 72 ntBASIC1.84□□□□□ -2.11
YIPF1Q9Y548 AC113195.1-201ENST00000579952 141 ntBASIC1.84□□□□□ -2.11
YIPF1Q9Y548 MIR4719-201ENST00000585233 84 ntBASIC1.84□□□□□ -2.11
YIPF1Q9Y548 AC005786.1-201ENST00000588553 154 ntBASIC1.84□□□□□ -2.11
YIPF1Q9Y548 AC022432.1-201ENST00000595739 310 ntBASIC1.84□□□□□ -2.11
YIPF1Q9Y548 AC008749.1-201ENST00000597650 306 ntBASIC1.84□□□□□ -2.11
YIPF1Q9Y548 MIR338-201ENST00000636369 67 ntBASIC1.84□□□□□ -2.11
YIPF1Q9Y548 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
YIPF1Q9Y548 ZNF702P-202ENST00000434269 1966 ntBASIC1.83□□□□□ -2.12
YIPF1Q9Y548 RNU6-937P-201ENST00000384325 106 ntBASIC1.83□□□□□ -2.12
YIPF1Q9Y548 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
YIPF1Q9Y548 AL512604.1-201ENST00000404812 257 ntBASIC1.83□□□□□ -2.12
YIPF1Q9Y548 AL355796.1-201ENST00000406706 323 ntBASIC1.83□□□□□ -2.12
YIPF1Q9Y548 RNU6-985P-201ENST00000410182 104 ntBASIC1.83□□□□□ -2.12
YIPF1Q9Y548 AC113618.1-201ENST00000416747 285 ntBASIC1.83□□□□□ -2.12
YIPF1Q9Y548 AC005002.2-201ENST00000438228 269 ntBASIC1.83□□□□□ -2.12
YIPF1Q9Y548 RNU6-764P-201ENST00000516396 105 ntBASIC1.83□□□□□ -2.12
YIPF1Q9Y548 RNU6-966P-201ENST00000516479 104 ntBASIC1.83□□□□□ -2.12
YIPF1Q9Y548 RNU6-1046P-201ENST00000516538 107 ntBASIC1.83□□□□□ -2.12
YIPF1Q9Y548 RNU6-897P-201ENST00000517135 105 ntBASIC1.83□□□□□ -2.12
YIPF1Q9Y548 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.83□□□□□ -2.12
YIPF1Q9Y548 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.83□□□□□ -2.12
YIPF1Q9Y548 RAC1P9-201ENST00000604990 392 ntBASIC1.83□□□□□ -2.12
YIPF1Q9Y548 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.83□□□□□ -2.12
YIPF1Q9Y548 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.83□□□□□ -2.12
YIPF1Q9Y548 U6.115-201ENST00000636045 103 ntBASIC1.83□□□□□ -2.12
YIPF1Q9Y548 AC008555.8-201ENST00000623602 2168 ntBASIC1.83□□□□□ -2.12
YIPF1Q9Y548 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
YIPF1Q9Y548 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
YIPF1Q9Y548 RNU6-1266P-201ENST00000362794 105 ntBASIC1.82□□□□□ -2.12
YIPF1Q9Y548 snoU2-30.2-201ENST00000362805 70 ntBASIC1.82□□□□□ -2.12
YIPF1Q9Y548 RNU1-96P-201ENST00000364163 162 ntBASIC1.82□□□□□ -2.12
YIPF1Q9Y548 SNORA63.7-201ENST00000365579 123 ntBASIC1.82□□□□□ -2.12
YIPF1Q9Y548 Y_RNA.380-201ENST00000365663 111 ntBASIC1.82□□□□□ -2.12
YIPF1Q9Y548 Y_RNA.422-201ENST00000384054 114 ntBASIC1.82□□□□□ -2.12
YIPF1Q9Y548 SNORA20B-201ENST00000384220 132 ntBASIC1.82□□□□□ -2.12
YIPF1Q9Y548 RNU6-1199P-201ENST00000411249 104 ntBASIC1.82□□□□□ -2.12
YIPF1Q9Y548 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.82□□□□□ -2.12
YIPF1Q9Y548 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.82□□□□□ -2.12
YIPF1Q9Y548 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.82□□□□□ -2.12
YIPF1Q9Y548 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.82□□□□□ -2.12
YIPF1Q9Y548 MIR5094-201ENST00000578766 85 ntBASIC1.82□□□□□ -2.12
YIPF1Q9Y548 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.82□□□□□ -2.12
YIPF1Q9Y548 MIR502-201ENST00000606349 86 ntBASIC1.82□□□□□ -2.12
YIPF1Q9Y548 AL627230.6-201ENST00000611129 280 ntBASIC1.82□□□□□ -2.12
YIPF1Q9Y548 SNORA33-201ENST00000363664 130 ntBASIC1.81□□□□□ -2.12
YIPF1Q9Y548 RNU6-1175P-201ENST00000365200 107 ntBASIC1.81□□□□□ -2.12
YIPF1Q9Y548 Y_RNA.338-201ENST00000365320 114 ntBASIC1.81□□□□□ -2.12
YIPF1Q9Y548 Y_RNA.446-201ENST00000384178 104 ntBASIC1.81□□□□□ -2.12
YIPF1Q9Y548 MIR606-201ENST00000384851 96 ntBASIC1.81□□□□□ -2.12
YIPF1Q9Y548 SNORA48.1-201ENST00000390879 135 ntBASIC1.81□□□□□ -2.12
YIPF1Q9Y548 RNA5SP467-201ENST00000391274 118 ntBASIC1.81□□□□□ -2.12
YIPF1Q9Y548 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms