Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AC010154.1-201ENST00000425857 269 ntBASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 MRPS10P1-201ENST00000448483 130 ntBASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 MTND5P22-201ENST00000458380 195 ntBASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 LINC01399-202ENST00000458450 244 ntBASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 RNA5SP20-201ENST00000515976 84 ntBASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 SNORA70.12-201ENST00000516084 153 ntBASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 AC084364.2-201ENST00000546924 395 ntBASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 MYL12BP1-201ENST00000569826 507 ntBASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 MIR4438-201ENST00000585271 93 ntBASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 AL360085.1-201ENST00000604713 532 ntBASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 U6.108-201ENST00000637764 58 ntBASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 AC010615.1-201ENST00000594254 1764 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 ZNF720P1-201ENST00000562403 1939 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 SNORD113-8-201ENST00000363497 74 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 SNORD114-30-201ENST00000364448 72 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 RNU6-21P-201ENST00000384710 107 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 RNU4-30P-201ENST00000410245 143 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 RNU6-121P-201ENST00000410525 99 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 RNA5SP100-201ENST00000410903 110 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 RNA5SP59-201ENST00000410922 110 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 AC245047.4-201ENST00000433189 144 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 AC069257.2-201ENST00000441819 155 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 AL731563.1-201ENST00000442202 214 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 RPL23AP7-203ENST00000449021 469 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 HMGB3P17-201ENST00000504195 649 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 AC025465.3-201ENST00000510570 311 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 RNU6-327P-201ENST00000516270 127 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 RNA5SP82-201ENST00000516707 92 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 AC023157.2-201ENST00000540596 141 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 MIR4648-201ENST00000580107 72 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 AC010900.2-201ENST00000604508 210 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 PRR13P7-201ENST00000605538 430 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
LSM4Q9Y4Z0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 Y_RNA.105-201ENST00000363182 111 ntBASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 RNU1-22P-201ENST00000363334 158 ntBASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 RNU6-112P-201ENST00000363599 104 ntBASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 SNORA33-201ENST00000363664 130 ntBASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 RNU6-407P-201ENST00000365280 104 ntBASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 MIR17-201ENST00000385012 84 ntBASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 RNA5SP323-201ENST00000391094 133 ntBASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 RNU6-1186P-201ENST00000410429 97 ntBASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 EBAG9P1-201ENST00000418955 543 ntBASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 RPS26P55-201ENST00000471178 356 ntBASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 RNU6-496P-201ENST00000516145 99 ntBASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 RNU7-128P-201ENST00000517247 62 ntBASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 IGKV3-31-201ENST00000523109 329 ntBASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 MIR4769-201ENST00000584126 77 ntBASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 AC136443.5-201ENST00000603741 370 ntBASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 AC005034.5-201ENST00000604219 466 ntBASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 MIR1291-201ENST00000627649 87 ntBASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LSM4Q9Y4Z0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 Y_RNA.124-201ENST00000363339 93 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 RNU6-324P-201ENST00000363957 106 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 Y_RNA.222-201ENST00000364264 102 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 Y_RNA.329-201ENST00000365209 107 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 Y_RNA.459-201ENST00000384251 102 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 MIR144-201ENST00000384886 86 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 AL359511.1-201ENST00000402970 211 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 RN7SKP223-201ENST00000410582 62 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 RNU2-61P-201ENST00000411069 191 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 AC009310.1-201ENST00000414414 451 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 MTND2P23-201ENST00000422990 651 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 AL356320.1-201ENST00000429616 163 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 RPS26P45-201ENST00000471748 340 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 AL163195.1-201ENST00000496941 348 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 AC097462.1-201ENST00000514125 324 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 RNU6-1045P-201ENST00000516321 107 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 RNU7-172P-201ENST00000517125 64 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 MIR4287-201ENST00000579398 78 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 AC127459.3-201ENST00000624328 466 ntBASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.86□□□□□ -2.11
LSM4Q9Y4Z0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 AL596028.1-201ENST00000326971 197 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms