Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 MIR410-201ENST00000362222 80 ntBASIC1.93□□□□□ -2.1
KDM3AQ9Y4C1 Y_RNA.112-201ENST00000363250 102 ntBASIC1.93□□□□□ -2.1
KDM3AQ9Y4C1 Y_RNA.535-201ENST00000384612 99 ntBASIC1.93□□□□□ -2.1
KDM3AQ9Y4C1 RNU11-5P-201ENST00000391216 129 ntBASIC1.93□□□□□ -2.1
KDM3AQ9Y4C1 SUMO1P2-201ENST00000452524 304 ntBASIC1.93□□□□□ -2.1
KDM3AQ9Y4C1 RPL36AP21-201ENST00000490372 323 ntBASIC1.93□□□□□ -2.1
KDM3AQ9Y4C1 AC084364.2-201ENST00000546924 395 ntBASIC1.93□□□□□ -2.1
KDM3AQ9Y4C1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.93□□□□□ -2.1
KDM3AQ9Y4C1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.93□□□□□ -2.1
KDM3AQ9Y4C1 AC006380.1-201ENST00000603598 186 ntBASIC1.93□□□□□ -2.1
KDM3AQ9Y4C1 AC138305.3-201ENST00000624988 240 ntBASIC1.93□□□□□ -2.1
KDM3AQ9Y4C1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
KDM3AQ9Y4C1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KDM3AQ9Y4C1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KDM3AQ9Y4C1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KDM3AQ9Y4C1 RNU6-112P-201ENST00000363599 104 ntBASIC1.92□□□□□ -2.1
KDM3AQ9Y4C1 RNU6-271P-201ENST00000363858 105 ntBASIC1.92□□□□□ -2.1
KDM3AQ9Y4C1 RNU6-457P-201ENST00000363999 107 ntBASIC1.92□□□□□ -2.1
KDM3AQ9Y4C1 Y_RNA.287-201ENST00000364853 94 ntBASIC1.92□□□□□ -2.1
KDM3AQ9Y4C1 AC018865.2-201ENST00000423631 129 ntBASIC1.92□□□□□ -2.1
KDM3AQ9Y4C1 SNORD65B-201ENST00000459126 73 ntBASIC1.92□□□□□ -2.1
KDM3AQ9Y4C1 RPS27P22-201ENST00000478056 241 ntBASIC1.92□□□□□ -2.1
KDM3AQ9Y4C1 SNORA40.14-201ENST00000516543 86 ntBASIC1.92□□□□□ -2.1
KDM3AQ9Y4C1 AC027419.1-201ENST00000522976 328 ntBASIC1.92□□□□□ -2.1
KDM3AQ9Y4C1 MIR4498-201ENST00000577599 66 ntBASIC1.92□□□□□ -2.1
KDM3AQ9Y4C1 MIR4659A-201ENST00000580269 81 ntBASIC1.92□□□□□ -2.1
KDM3AQ9Y4C1 AC091925.1-201ENST00000623204 462 ntBASIC1.92□□□□□ -2.1
KDM3AQ9Y4C1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KDM3AQ9Y4C1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KDM3AQ9Y4C1 Y_RNA.813-201ENST00000364639 102 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 Y_RNA.496-201ENST00000384444 101 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 MRPL35P1-201ENST00000404272 572 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 RNU6-1186P-201ENST00000410429 97 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 SDAD1P3-201ENST00000427380 333 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 RNU6-1012P-201ENST00000516606 109 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 RNA5SP481-201ENST00000516814 122 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 SNORA44.1-201ENST00000517031 108 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 AC010900.2-201ENST00000604508 210 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 uc_338.22-201ENST00000622722 187 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 SNORD48-201ENST00000364953 64 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 Y_RNA.395-201ENST00000383945 109 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 Y_RNA.424-201ENST00000384063 103 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 RNA5SP467-201ENST00000391274 118 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 AC010154.1-201ENST00000425857 269 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 Y_RNA.639-201ENST00000458981 102 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 AC010409.1-201ENST00000487382 476 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 AC010469.2-201ENST00000496412 480 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 RNU4-77P-201ENST00000516692 156 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 SNORA31.17-201ENST00000516953 127 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 MIR4438-201ENST00000585271 93 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 AC005176.2-201ENST00000596933 147 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 MIR502-201ENST00000606349 86 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 Y_RNA.772-201ENST00000606692 102 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 MIR8081-201ENST00000611533 95 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 U6.92-201ENST00000636464 89 ntBASIC1.91□□□□□ -2.1
KDM3AQ9Y4C1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
KDM3AQ9Y4C1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KDM3AQ9Y4C1 RNY1P14-201ENST00000384426 108 ntBASIC1.9□□□□□ -2.11
KDM3AQ9Y4C1 RPL23AP36-201ENST00000413895 458 ntBASIC1.9□□□□□ -2.11
KDM3AQ9Y4C1 FTH1P12-201ENST00000432137 551 ntBASIC1.9□□□□□ -2.11
KDM3AQ9Y4C1 AL137792.2-201ENST00000443484 235 ntBASIC1.9□□□□□ -2.11
KDM3AQ9Y4C1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.9□□□□□ -2.11
KDM3AQ9Y4C1 HMGB3P17-201ENST00000504195 649 ntBASIC1.9□□□□□ -2.11
KDM3AQ9Y4C1 Y_RNA.713-201ENST00000517013 96 ntBASIC1.9□□□□□ -2.11
KDM3AQ9Y4C1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.9□□□□□ -2.11
KDM3AQ9Y4C1 MIR5188-201ENST00000583467 113 ntBASIC1.9□□□□□ -2.11
KDM3AQ9Y4C1 U6.73-201ENST00000619194 103 ntBASIC1.9□□□□□ -2.11
KDM3AQ9Y4C1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 RNU6-414P-201ENST00000363705 104 ntBASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 RNU6-407P-201ENST00000365280 104 ntBASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 SNORD42.2-201ENST00000365570 69 ntBASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 AC245047.4-201ENST00000433189 144 ntBASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 CHEK2P4-201ENST00000450340 246 ntBASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 SNORA25.10-201ENST00000515926 124 ntBASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 RNU6-475P-201ENST00000516073 104 ntBASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 RN7SKP295-201ENST00000517264 153 ntBASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 RNU6-988P-201ENST00000519081 107 ntBASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 AC023157.2-201ENST00000540596 141 ntBASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 RPL21P9-201ENST00000556149 474 ntBASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 AC022254.1-201ENST00000567857 235 ntBASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 AC004467.1-201ENST00000615678 330 ntBASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 AC240442.1-201ENST00000616055 283 ntBASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.89□□□□□ -2.11
KDM3AQ9Y4C1 AC006026.1-201ENST00000444025 1803 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 Y_RNA.11-201ENST00000362375 109 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 RNU6-661P-201ENST00000362409 107 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 RNU6-626P-201ENST00000363354 107 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 Y_RNA.128-201ENST00000363391 112 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 RNU6-961P-201ENST00000363893 105 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 RNU4-50P-201ENST00000364361 141 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 SNORD14.1-201ENST00000365609 90 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 RNU6-708P-201ENST00000384217 107 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 SNORA20B-201ENST00000384220 132 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 RNU6-950P-201ENST00000384651 107 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms