Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 AL159169.1-201ENST00000421119 127 ntBASIC3.7□□□□□ -1.82
NOD1Q9Y239 AC023141.11-201ENST00000508864 202 ntBASIC3.7□□□□□ -1.82
NOD1Q9Y239 RNU6-772P-201ENST00000516042 105 ntBASIC3.7□□□□□ -1.82
NOD1Q9Y239 RNU7-149P-201ENST00000516739 59 ntBASIC3.7□□□□□ -1.82
NOD1Q9Y239 RNU6-1096P-201ENST00000517089 102 ntBASIC3.7□□□□□ -1.82
NOD1Q9Y239 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.7□□□□□ -1.82
NOD1Q9Y239 JPX_2.1-201ENST00000614161 69 ntBASIC3.7□□□□□ -1.82
NOD1Q9Y239 MIR6852-201ENST00000621699 66 ntBASIC3.7□□□□□ -1.82
NOD1Q9Y239 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.7□□□□□ -1.82
NOD1Q9Y239 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NOD1Q9Y239 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NOD1Q9Y239 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NOD1Q9Y239 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.69□□□□□ -1.82
NOD1Q9Y239 SNORD18B-201ENST00000365659 72 ntBASIC3.69□□□□□ -1.82
NOD1Q9Y239 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NOD1Q9Y239 MLLT10P1-201ENST00000418346 262 ntBASIC3.69□□□□□ -1.82
NOD1Q9Y239 HMGN2P34-201ENST00000437647 269 ntBASIC3.69□□□□□ -1.82
NOD1Q9Y239 AL158147.1-201ENST00000443970 75 ntBASIC3.69□□□□□ -1.82
NOD1Q9Y239 RPL39P40-201ENST00000445481 146 ntBASIC3.69□□□□□ -1.82
NOD1Q9Y239 OR9P1P-201ENST00000496431 281 ntBASIC3.69□□□□□ -1.82
NOD1Q9Y239 PDCD5P2-201ENST00000507570 312 ntBASIC3.69□□□□□ -1.82
NOD1Q9Y239 EIF4BP1-201ENST00000554881 351 ntBASIC3.69□□□□□ -1.82
NOD1Q9Y239 MTND5P34-201ENST00000568888 325 ntBASIC3.69□□□□□ -1.82
NOD1Q9Y239 MIR4513-201ENST00000581077 86 ntBASIC3.69□□□□□ -1.82
NOD1Q9Y239 MIR3914-2-201ENST00000637339 95 ntBASIC3.69□□□□□ -1.82
NOD1Q9Y239 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NOD1Q9Y239 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
NOD1Q9Y239 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.69□□□□□ -1.82
NOD1Q9Y239 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NOD1Q9Y239 AC009487.2-201ENST00000420969 6821 ntBASIC3.68□□□□□ -1.82
NOD1Q9Y239 SNORA63.4-201ENST00000362763 126 ntBASIC3.68□□□□□ -1.82
NOD1Q9Y239 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NOD1Q9Y239 RNY4P18-201ENST00000391107 89 ntBASIC3.68□□□□□ -1.82
NOD1Q9Y239 Y_RNA.621-201ENST00000411065 96 ntBASIC3.68□□□□□ -1.82
NOD1Q9Y239 AL513477.1-202ENST00000417061 214 ntBASIC3.68□□□□□ -1.82
NOD1Q9Y239 AC060773.1-201ENST00000421698 310 ntBASIC3.68□□□□□ -1.82
NOD1Q9Y239 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.68□□□□□ -1.82
NOD1Q9Y239 RPL23AP67-201ENST00000465341 474 ntBASIC3.68□□□□□ -1.82
NOD1Q9Y239 S100A11P2-201ENST00000467589 312 ntBASIC3.68□□□□□ -1.82
NOD1Q9Y239 SNORA48.11-201ENST00000517015 89 ntBASIC3.68□□□□□ -1.82
NOD1Q9Y239 AC026333.2-201ENST00000542164 106 ntBASIC3.68□□□□□ -1.82
NOD1Q9Y239 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.68□□□□□ -1.82
NOD1Q9Y239 MIR3121-201ENST00000579680 77 ntBASIC3.68□□□□□ -1.82
NOD1Q9Y239 MIR4298-201ENST00000584380 73 ntBASIC3.68□□□□□ -1.82
NOD1Q9Y239 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.68□□□□□ -1.82
NOD1Q9Y239 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.68□□□□□ -1.82
NOD1Q9Y239 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NOD1Q9Y239 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.68□□□□□ -1.82
NOD1Q9Y239 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NOD1Q9Y239 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NOD1Q9Y239 MIR340-201ENST00000362125 95 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 Y_RNA.114-201ENST00000363265 113 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 RNU6-1138P-201ENST00000365359 106 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 MIR520G-201ENST00000385064 90 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 RNU6-1186P-201ENST00000410429 97 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 AC244505.4-201ENST00000434905 287 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 SSXP5-201ENST00000443473 287 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 AL357552.1-201ENST00000445254 415 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.67□□□□□ -1.82
NOD1Q9Y239 RNU6-1146P-201ENST00000516282 102 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 RNU6-126P-201ENST00000516685 103 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 SNORA70.19-201ENST00000516717 90 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 AC133485.4-201ENST00000561835 220 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 AC138907.4-201ENST00000570107 226 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 MIR4662B-201ENST00000579498 81 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 AC020914.4-201ENST00000597690 277 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 AL356280.1-201ENST00000603614 379 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 AC073413.2-201ENST00000604332 360 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 MIR486-1-201ENST00000612171 68 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
NOD1Q9Y239 AC068647.1-201ENST00000489539 2265 ntBASIC3.67□□□□□ -1.82
NOD1Q9Y239 AL356274.2-201ENST00000624379 3752 ntBASIC3.66□□□□□ -1.82
NOD1Q9Y239 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
NOD1Q9Y239 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NOD1Q9Y239 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NOD1Q9Y239 Y_RNA.280-201ENST00000364765 112 ntBASIC3.66□□□□□ -1.82
NOD1Q9Y239 Y_RNA.486-201ENST00000384398 107 ntBASIC3.66□□□□□ -1.82
NOD1Q9Y239 RNU2-48P-201ENST00000410694 191 ntBASIC3.66□□□□□ -1.82
NOD1Q9Y239 RN7SL863P-201ENST00000462370 296 ntBASIC3.66□□□□□ -1.82
NOD1Q9Y239 YWHAEP4-201ENST00000505390 198 ntBASIC3.66□□□□□ -1.82
NOD1Q9Y239 Y_RNA.690-201ENST00000516603 95 ntBASIC3.66□□□□□ -1.82
NOD1Q9Y239 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NOD1Q9Y239 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NOD1Q9Y239 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
NOD1Q9Y239 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.65□□□□□ -1.82
NOD1Q9Y239 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.65□□□□□ -1.82
NOD1Q9Y239 SNORA40.5-201ENST00000391061 128 ntBASIC3.65□□□□□ -1.83
NOD1Q9Y239 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.65□□□□□ -1.83
NOD1Q9Y239 AL138878.1-201ENST00000405131 347 ntBASIC3.65□□□□□ -1.83
NOD1Q9Y239 RNU2-63P-201ENST00000410792 194 ntBASIC3.65□□□□□ -1.83
NOD1Q9Y239 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.65□□□□□ -1.83
NOD1Q9Y239 UBE2DNL-203ENST00000474922 222 ntBASIC3.65□□□□□ -1.83
NOD1Q9Y239 SNORA18.4-201ENST00000516440 124 ntBASIC3.65□□□□□ -1.83
NOD1Q9Y239 RNU6-1061P-201ENST00000516530 99 ntBASIC3.65□□□□□ -1.83
NOD1Q9Y239 AL355297.2-201ENST00000604792 129 ntBASIC3.65□□□□□ -1.83
NOD1Q9Y239 RMST_8.1-201ENST00000610287 165 ntBASIC3.65□□□□□ -1.83
NOD1Q9Y239 U6.95-201ENST00000636931 70 ntBASIC3.65□□□□□ -1.83
NOD1Q9Y239 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
NOD1Q9Y239 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms