Protein–RNA interactions for Protein: Q9UMS5

PHTF1, Putative homeodomain transcription factor 1, humanhuman

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1Q9UMS5 AL121655.1-201ENST00000605811 308 ntBASIC2.3□□□□□ -2.04
PHTF1Q9UMS5 AC240442.1-201ENST00000616055 283 ntBASIC2.3□□□□□ -2.04
PHTF1Q9UMS5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.3□□□□□ -2.04
PHTF1Q9UMS5 AC010205.1-201ENST00000616668 449 ntBASIC2.3□□□□□ -2.04
PHTF1Q9UMS5 MIR6766-201ENST00000622641 72 ntBASIC2.3□□□□□ -2.04
PHTF1Q9UMS5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
PHTF1Q9UMS5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PHTF1Q9UMS5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
PHTF1Q9UMS5 RNU6-1309P-201ENST00000363305 108 ntBASIC2.29□□□□□ -2.04
PHTF1Q9UMS5 Y_RNA.230-201ENST00000364348 109 ntBASIC2.29□□□□□ -2.04
PHTF1Q9UMS5 SNORA51.11-201ENST00000384442 131 ntBASIC2.29□□□□□ -2.04
PHTF1Q9UMS5 MIR568-201ENST00000385036 95 ntBASIC2.29□□□□□ -2.04
PHTF1Q9UMS5 RNU6-1109P-201ENST00000391187 107 ntBASIC2.29□□□□□ -2.04
PHTF1Q9UMS5 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.29□□□□□ -2.04
PHTF1Q9UMS5 EBAG9P1-201ENST00000418955 543 ntBASIC2.29□□□□□ -2.04
PHTF1Q9UMS5 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.29□□□□□ -2.04
PHTF1Q9UMS5 AC073910.1-201ENST00000445047 438 ntBASIC2.29□□□□□ -2.04
PHTF1Q9UMS5 SNORD65B-201ENST00000459126 73 ntBASIC2.29□□□□□ -2.04
PHTF1Q9UMS5 AC010655.3-201ENST00000478818 450 ntBASIC2.29□□□□□ -2.04
PHTF1Q9UMS5 RPL26P26-201ENST00000480251 434 ntBASIC2.29□□□□□ -2.04
PHTF1Q9UMS5 AL627230.6-201ENST00000611129 280 ntBASIC2.29□□□□□ -2.04
PHTF1Q9UMS5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PHTF1Q9UMS5 RNU6-271P-201ENST00000363858 105 ntBASIC2.28□□□□□ -2.04
PHTF1Q9UMS5 Y_RNA.338-201ENST00000365320 114 ntBASIC2.28□□□□□ -2.04
PHTF1Q9UMS5 Y_RNA.458-201ENST00000384240 102 ntBASIC2.28□□□□□ -2.04
PHTF1Q9UMS5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.28□□□□□ -2.04
PHTF1Q9UMS5 RNA5SP323-201ENST00000391094 133 ntBASIC2.28□□□□□ -2.04
PHTF1Q9UMS5 AL356379.1-201ENST00000414105 126 ntBASIC2.28□□□□□ -2.04
PHTF1Q9UMS5 RNU1-142P-201ENST00000516682 145 ntBASIC2.28□□□□□ -2.04
PHTF1Q9UMS5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.28□□□□□ -2.04
PHTF1Q9UMS5 AC008269.2-201ENST00000561915 1105 ntBASIC2.28□□□□□ -2.04
PHTF1Q9UMS5 MIR4299-201ENST00000577899 72 ntBASIC2.28□□□□□ -2.04
PHTF1Q9UMS5 AC005176.2-201ENST00000596933 147 ntBASIC2.28□□□□□ -2.04
PHTF1Q9UMS5 AC008749.1-201ENST00000597650 306 ntBASIC2.28□□□□□ -2.04
PHTF1Q9UMS5 AC006380.1-201ENST00000603598 186 ntBASIC2.28□□□□□ -2.04
PHTF1Q9UMS5 PRR13P7-201ENST00000605538 430 ntBASIC2.28□□□□□ -2.04
PHTF1Q9UMS5 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.28□□□□□ -2.04
PHTF1Q9UMS5 AL359075.3-201ENST00000613288 217 ntBASIC2.28□□□□□ -2.04
PHTF1Q9UMS5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PHTF1Q9UMS5 AC092881.1-201ENST00000638218 2733 ntBASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 SNORD114-1-201ENST00000362705 72 ntBASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 Y_RNA.152-201ENST00000363578 100 ntBASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 RNU6-961P-201ENST00000363893 105 ntBASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 Y_RNA.214-201ENST00000364201 112 ntBASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 Y_RNA.287-201ENST00000364853 94 ntBASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 MIR520A-201ENST00000384862 85 ntBASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 RNU11-5P-201ENST00000391216 129 ntBASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 AC009310.1-201ENST00000414414 451 ntBASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 AC010154.1-201ENST00000425857 269 ntBASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 AC090255.1-201ENST00000495779 349 ntBASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 MTCO2P24-201ENST00000515611 426 ntBASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 AC131281.1-201ENST00000522984 164 ntBASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 AP000553.5-201ENST00000641933 54 ntBASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 AC010615.1-201ENST00000594254 1764 ntBASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 CENPCP1-201ENST00000533085 2578 ntBASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
PHTF1Q9UMS5 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
PHTF1Q9UMS5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
PHTF1Q9UMS5 Y_RNA.276-201ENST00000364732 109 ntBASIC2.26□□□□□ -2.05
PHTF1Q9UMS5 RNA5SP37-201ENST00000365420 130 ntBASIC2.26□□□□□ -2.05
PHTF1Q9UMS5 RPL21P1-201ENST00000399532 476 ntBASIC2.26□□□□□ -2.05
PHTF1Q9UMS5 RNA5SP100-201ENST00000410903 110 ntBASIC2.26□□□□□ -2.05
PHTF1Q9UMS5 RNA5SP59-201ENST00000410922 110 ntBASIC2.26□□□□□ -2.05
PHTF1Q9UMS5 ELOCP20-201ENST00000422460 345 ntBASIC2.26□□□□□ -2.05
PHTF1Q9UMS5 RPEP5-201ENST00000441137 268 ntBASIC2.26□□□□□ -2.05
PHTF1Q9UMS5 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.26□□□□□ -2.05
PHTF1Q9UMS5 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.26□□□□□ -2.05
PHTF1Q9UMS5 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.26□□□□□ -2.05
PHTF1Q9UMS5 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.26□□□□□ -2.05
PHTF1Q9UMS5 AC004467.1-201ENST00000615678 330 ntBASIC2.26□□□□□ -2.05
PHTF1Q9UMS5 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.26□□□□□ -2.05
PHTF1Q9UMS5 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 Y_RNA.47-201ENST00000362697 108 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 RNU6-626P-201ENST00000363354 107 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 Y_RNA.176-201ENST00000363815 109 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 Y_RNA.210-201ENST00000364161 110 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 RNU6-20P-201ENST00000384106 107 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 Y_RNA.471-201ENST00000384312 102 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 RNU6-463P-201ENST00000384340 107 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 MIR221-201ENST00000385135 110 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 MIR1289-2-201ENST00000408360 111 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 RNU2-7P-201ENST00000410794 178 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 RNU6-130P-201ENST00000411112 103 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 AL390729.2-201ENST00000416137 156 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 MTCYBP9-201ENST00000431021 303 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 MRPS35P2-201ENST00000508242 191 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 MRPS17P9-201ENST00000511924 393 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 RNU6-897P-201ENST00000517135 105 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 MIR4713-201ENST00000582691 75 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 AC010900.2-201ENST00000604508 210 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 RAC1P9-201ENST00000604990 392 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 AC011476.5-201ENST00000615594 130 ntBASIC2.25□□□□□ -2.05
PHTF1Q9UMS5 U6.73-201ENST00000619194 103 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 234.3 ms