Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.98□□□□□ -2.25
CDH9Q9ULB4 AC139792.2-201ENST00000624218 587 ntBASIC0.98□□□□□ -2.25
CDH9Q9ULB4 AC018630.2-201ENST00000534866 2403 ntBASIC0.97□□□□□ -2.25
CDH9Q9ULB4 Y_RNA.339-201ENST00000365325 102 ntBASIC0.97□□□□□ -2.25
CDH9Q9ULB4 Y_RNA.533-201ENST00000384596 114 ntBASIC0.97□□□□□ -2.25
CDH9Q9ULB4 MTATP6P13-201ENST00000438531 667 ntBASIC0.97□□□□□ -2.25
CDH9Q9ULB4 MRPS10P1-201ENST00000448483 130 ntBASIC0.97□□□□□ -2.25
CDH9Q9ULB4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.97□□□□□ -2.25
CDH9Q9ULB4 SNORD5.1-201ENST00000458800 75 ntBASIC0.97□□□□□ -2.25
CDH9Q9ULB4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.97□□□□□ -2.25
CDH9Q9ULB4 MTND5P5-201ENST00000503764 376 ntBASIC0.97□□□□□ -2.25
CDH9Q9ULB4 AC134698.4-201ENST00000523451 826 ntBASIC0.97□□□□□ -2.25
CDH9Q9ULB4 AC136932.1-201ENST00000574771 208 ntBASIC0.97□□□□□ -2.25
CDH9Q9ULB4 SNORA28-201ENST00000606769 126 ntBASIC0.97□□□□□ -2.25
CDH9Q9ULB4 AC006435.5-201ENST00000624486 112 ntBASIC0.97□□□□□ -2.25
CDH9Q9ULB4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CDH9Q9ULB4 AL391516.1-201ENST00000554380 2449 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
CDH9Q9ULB4 MIR373-201ENST00000362273 69 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 Y_RNA.86-201ENST00000363020 111 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 Y_RNA.184-201ENST00000363884 108 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 RNU6-595P-201ENST00000363944 107 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 Y_RNA.473-201ENST00000384333 102 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 MIR520E-201ENST00000384867 87 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 MIR548K-201ENST00000408406 116 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 MTND1P34-201ENST00000438556 671 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 AC026782.1-201ENST00000512952 449 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 SNORA31.2-201ENST00000516019 134 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 SNORA31.4-201ENST00000516049 129 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 RNU6-273P-201ENST00000516937 96 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.96□□□□□ -2.26
CDH9Q9ULB4 AF235103.2-201ENST00000525753 346 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.96□□□□□ -2.26
CDH9Q9ULB4 MIR5701-3-201ENST00000578890 82 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 MIR5701-1-201ENST00000585138 82 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 FAM106DP-201ENST00000586416 501 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 AC068790.6-201ENST00000602558 258 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 AC080078.2-201ENST00000603766 501 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 GHRLOS.1-201ENST00000610995 70 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 MIR5701-2-201ENST00000615634 82 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 AC012676.2-201ENST00000619258 186 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 AC027514.1-201ENST00000588561 1603 ntBASIC0.96□□□□□ -2.26
CDH9Q9ULB4 Y_RNA.224-201ENST00000364308 111 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 Y_RNA.505-201ENST00000384489 102 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 Y_RNA.573-201ENST00000384763 105 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 MIR10B-201ENST00000385011 110 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 Y_RNA.599-201ENST00000410489 109 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 RNU6-1054P-201ENST00000411293 104 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.95□□□□□ -2.26
CDH9Q9ULB4 STAG3L5P-204ENST00000443759 179 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 AP000870.1-201ENST00000472927 406 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 RPS27P22-201ENST00000478056 241 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.95□□□□□ -2.26
CDH9Q9ULB4 AC105758.1-201ENST00000506038 399 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 UBL5P1-201ENST00000507979 193 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.95□□□□□ -2.26
CDH9Q9ULB4 RNU7-175P-201ENST00000515915 61 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 RNU6-358P-201ENST00000516564 75 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 AC023157.2-201ENST00000540596 141 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.95□□□□□ -2.26
CDH9Q9ULB4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.95□□□□□ -2.26
CDH9Q9ULB4 MIR4778-201ENST00000577635 80 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 MIR3973-201ENST00000579824 107 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 AC060780.3-201ENST00000589464 80 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 AC211469.2-201ENST00000605461 205 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 AC010999.1-201ENST00000611856 324 ntBASIC0.95□□□□□ -2.26
CDH9Q9ULB4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CDH9Q9ULB4 RNU6-874P-201ENST00000362390 105 ntBASIC0.94□□□□□ -2.26
CDH9Q9ULB4 MIR19B1-201ENST00000384829 87 ntBASIC0.94□□□□□ -2.26
CDH9Q9ULB4 RNU6-910P-201ENST00000390844 107 ntBASIC0.94□□□□□ -2.26
CDH9Q9ULB4 RNU6-192P-201ENST00000391253 100 ntBASIC0.94□□□□□ -2.26
CDH9Q9ULB4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.94□□□□□ -2.26
CDH9Q9ULB4 AC010469.2-201ENST00000496412 480 ntBASIC0.94□□□□□ -2.26
CDH9Q9ULB4 Y_RNA.682-201ENST00000516457 100 ntBASIC0.94□□□□□ -2.26
CDH9Q9ULB4 AC091144.1-201ENST00000519573 138 ntBASIC0.94□□□□□ -2.26
CDH9Q9ULB4 CBX3P8-201ENST00000532412 525 ntBASIC0.94□□□□□ -2.26
CDH9Q9ULB4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.94□□□□□ -2.26
CDH9Q9ULB4 AC018462.2-201ENST00000605375 395 ntBASIC0.94□□□□□ -2.26
CDH9Q9ULB4 AC005014.2-201ENST00000607795 599 ntBASIC0.94□□□□□ -2.26
CDH9Q9ULB4 Y_RNA.48-201ENST00000362710 103 ntBASIC0.93□□□□□ -2.26
CDH9Q9ULB4 RNU4-79P-201ENST00000362764 141 ntBASIC0.93□□□□□ -2.26
CDH9Q9ULB4 RNU6-199P-201ENST00000362954 107 ntBASIC0.93□□□□□ -2.26
CDH9Q9ULB4 Y_RNA.405-201ENST00000383979 100 ntBASIC0.93□□□□□ -2.26
CDH9Q9ULB4 Y_RNA.451-201ENST00000384200 100 ntBASIC0.93□□□□□ -2.26
CDH9Q9ULB4 Y_RNA.524-201ENST00000384564 100 ntBASIC0.93□□□□□ -2.26
CDH9Q9ULB4 Y_RNA.561-201ENST00000384694 100 ntBASIC0.93□□□□□ -2.26
CDH9Q9ULB4 MIR653-201ENST00000385279 96 ntBASIC0.93□□□□□ -2.26
CDH9Q9ULB4 FCF1P9-201ENST00000412546 282 ntBASIC0.93□□□□□ -2.26
CDH9Q9ULB4 MTND3P8-201ENST00000412909 339 ntBASIC0.93□□□□□ -2.26
CDH9Q9ULB4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.93□□□□□ -2.26
CDH9Q9ULB4 AC048334.1-201ENST00000477975 159 ntBASIC0.93□□□□□ -2.26
CDH9Q9ULB4 AC010598.1-201ENST00000510378 103 ntBASIC0.93□□□□□ -2.26
CDH9Q9ULB4 Y_RNA.670-201ENST00000516255 105 ntBASIC0.93□□□□□ -2.26
CDH9Q9ULB4 AC027419.1-201ENST00000522976 328 ntBASIC0.93□□□□□ -2.26
CDH9Q9ULB4 AL590705.4-201ENST00000532209 134 ntBASIC0.93□□□□□ -2.26
CDH9Q9ULB4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.93□□□□□ -2.26
CDH9Q9ULB4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.93□□□□□ -2.26
CDH9Q9ULB4 MIR6128-201ENST00000615528 109 ntBASIC0.93□□□□□ -2.26
CDH9Q9ULB4 MIR6079-201ENST00000635807 62 ntBASIC0.93□□□□□ -2.26
CDH9Q9ULB4 ZNF299P-201ENST00000406845 1804 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms