Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.05□□□□□ -2.08
SIX4Q9UIU6 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.05□□□□□ -2.08
SIX4Q9UIU6 AC022441.3-201ENST00000605737 136 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.05□□□□□ -2.08
SIX4Q9UIU6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.05□□□□□ -2.08
SIX4Q9UIU6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SIX4Q9UIU6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
SIX4Q9UIU6 AL596028.1-201ENST00000326971 197 ntBASIC2.04□□□□□ -2.08
SIX4Q9UIU6 Y_RNA.331-201ENST00000365267 102 ntBASIC2.04□□□□□ -2.08
SIX4Q9UIU6 Y_RNA.332-201ENST00000365271 113 ntBASIC2.04□□□□□ -2.08
SIX4Q9UIU6 Y_RNA.446-201ENST00000384178 104 ntBASIC2.04□□□□□ -2.08
SIX4Q9UIU6 RNU6-975P-201ENST00000384296 105 ntBASIC2.04□□□□□ -2.08
SIX4Q9UIU6 RNU6-21P-201ENST00000384710 107 ntBASIC2.04□□□□□ -2.08
SIX4Q9UIU6 MIR1185-2-201ENST00000408687 86 ntBASIC2.04□□□□□ -2.08
SIX4Q9UIU6 RNA5SP475-201ENST00000410568 110 ntBASIC2.04□□□□□ -2.08
SIX4Q9UIU6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.04□□□□□ -2.08
SIX4Q9UIU6 AC114982.1-201ENST00000469402 321 ntBASIC2.04□□□□□ -2.08
SIX4Q9UIU6 RNU2-12P-201ENST00000517216 168 ntBASIC2.04□□□□□ -2.08
SIX4Q9UIU6 NDUFA5P6-201ENST00000542110 379 ntBASIC2.04□□□□□ -2.08
SIX4Q9UIU6 SNORD113-5-201ENST00000607261 78 ntBASIC2.04□□□□□ -2.08
SIX4Q9UIU6 AC022202.1-201ENST00000613515 211 ntBASIC2.04□□□□□ -2.08
SIX4Q9UIU6 AP001282.2-201ENST00000616149 309 ntBASIC2.04□□□□□ -2.08
SIX4Q9UIU6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
SIX4Q9UIU6 SNORD81.1-201ENST00000363064 77 ntBASIC2.03□□□□□ -2.08
SIX4Q9UIU6 RNA5SP138-201ENST00000365098 114 ntBASIC2.03□□□□□ -2.08
SIX4Q9UIU6 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SIX4Q9UIU6 MIR1262-201ENST00000408276 93 ntBASIC2.03□□□□□ -2.08
SIX4Q9UIU6 RNU2-54P-201ENST00000410299 190 ntBASIC2.03□□□□□ -2.08
SIX4Q9UIU6 RNU2-38P-201ENST00000410856 79 ntBASIC2.03□□□□□ -2.08
SIX4Q9UIU6 RNU6-57P-201ENST00000411348 103 ntBASIC2.03□□□□□ -2.08
SIX4Q9UIU6 RPS27P21-201ENST00000486977 252 ntBASIC2.03□□□□□ -2.08
SIX4Q9UIU6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.03□□□□□ -2.08
SIX4Q9UIU6 RNU6-155P-201ENST00000516347 100 ntBASIC2.03□□□□□ -2.08
SIX4Q9UIU6 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.03□□□□□ -2.08
SIX4Q9UIU6 AC004817.2-201ENST00000561794 651 ntBASIC2.03□□□□□ -2.08
SIX4Q9UIU6 AC127459.3-201ENST00000624328 466 ntBASIC2.03□□□□□ -2.08
SIX4Q9UIU6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
SIX4Q9UIU6 RNU4-90P-201ENST00000362773 141 ntBASIC2.02□□□□□ -2.09
SIX4Q9UIU6 RNU6-290P-201ENST00000365212 101 ntBASIC2.02□□□□□ -2.09
SIX4Q9UIU6 RNU6-1310P-201ENST00000384153 107 ntBASIC2.02□□□□□ -2.09
SIX4Q9UIU6 RNU1-148P-201ENST00000384472 162 ntBASIC2.02□□□□□ -2.09
SIX4Q9UIU6 Y_RNA.556-201ENST00000384677 113 ntBASIC2.02□□□□□ -2.09
SIX4Q9UIU6 AC123900.1-201ENST00000420390 96 ntBASIC2.02□□□□□ -2.09
SIX4Q9UIU6 AC096920.1-201ENST00000423991 241 ntBASIC2.02□□□□□ -2.09
SIX4Q9UIU6 AC139712.2-201ENST00000424302 339 ntBASIC2.02□□□□□ -2.09
SIX4Q9UIU6 MTCO1P44-201ENST00000441935 243 ntBASIC2.02□□□□□ -2.09
SIX4Q9UIU6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.02□□□□□ -2.09
SIX4Q9UIU6 AC005042.3-201ENST00000453230 174 ntBASIC2.02□□□□□ -2.09
SIX4Q9UIU6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.02□□□□□ -2.09
SIX4Q9UIU6 RPS29P11-201ENST00000496507 171 ntBASIC2.02□□□□□ -2.09
SIX4Q9UIU6 SEPT14P8-201ENST00000508026 178 ntBASIC2.02□□□□□ -2.09
SIX4Q9UIU6 MIR514B-201ENST00000516774 80 ntBASIC2.02□□□□□ -2.09
SIX4Q9UIU6 DEFB108E-201ENST00000524692 240 ntBASIC2.02□□□□□ -2.09
SIX4Q9UIU6 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.02□□□□□ -2.09
SIX4Q9UIU6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.02□□□□□ -2.09
SIX4Q9UIU6 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.02□□□□□ -2.09
SIX4Q9UIU6 snoZ196.1-201ENST00000625269 89 ntBASIC2.02□□□□□ -2.09
SIX4Q9UIU6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.02□□□□□ -2.09
SIX4Q9UIU6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.02□□□□□ -2.09
SIX4Q9UIU6 AC010615.1-201ENST00000594254 1764 ntBASIC2.02□□□□□ -2.09
SIX4Q9UIU6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.02□□□□□ -2.09
SIX4Q9UIU6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SIX4Q9UIU6 Y_RNA.237-201ENST00000364439 102 ntBASIC2.01□□□□□ -2.09
SIX4Q9UIU6 Y_RNA.288-201ENST00000364854 92 ntBASIC2.01□□□□□ -2.09
SIX4Q9UIU6 Y_RNA.518-201ENST00000384552 113 ntBASIC2.01□□□□□ -2.09
SIX4Q9UIU6 RNU6-1235P-201ENST00000384559 107 ntBASIC2.01□□□□□ -2.09
SIX4Q9UIU6 MIR9-3-201ENST00000385084 90 ntBASIC2.01□□□□□ -2.09
SIX4Q9UIU6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SIX4Q9UIU6 AC019129.1-201ENST00000403786 261 ntBASIC2.01□□□□□ -2.09
SIX4Q9UIU6 AC016909.1-201ENST00000415916 166 ntBASIC2.01□□□□□ -2.09
SIX4Q9UIU6 AL390729.2-201ENST00000416137 156 ntBASIC2.01□□□□□ -2.09
SIX4Q9UIU6 AC074290.1-201ENST00000448883 135 ntBASIC2.01□□□□□ -2.09
SIX4Q9UIU6 RNA5SP233-201ENST00000459153 113 ntBASIC2.01□□□□□ -2.09
SIX4Q9UIU6 RNU6-498P-201ENST00000459468 107 ntBASIC2.01□□□□□ -2.09
SIX4Q9UIU6 RNA5SP182-201ENST00000516064 82 ntBASIC2.01□□□□□ -2.09
SIX4Q9UIU6 RNU6-1338P-201ENST00000516328 91 ntBASIC2.01□□□□□ -2.09
SIX4Q9UIU6 AC023157.2-201ENST00000540596 141 ntBASIC2.01□□□□□ -2.09
SIX4Q9UIU6 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.01□□□□□ -2.09
SIX4Q9UIU6 AC008749.1-201ENST00000597650 306 ntBASIC2.01□□□□□ -2.09
SIX4Q9UIU6 MIR6845-201ENST00000613182 61 ntBASIC2.01□□□□□ -2.09
SIX4Q9UIU6 AL590240.4-201ENST00000616908 390 ntBASIC2.01□□□□□ -2.09
SIX4Q9UIU6 AC006001.4-201ENST00000622243 395 ntBASIC2.01□□□□□ -2.09
SIX4Q9UIU6 SNORD115-30-201ENST00000364117 82 ntBASIC2□□□□□ -2.09
SIX4Q9UIU6 Y_RNA.418-201ENST00000384029 102 ntBASIC2□□□□□ -2.09
SIX4Q9UIU6 MIR17-201ENST00000385012 84 ntBASIC2□□□□□ -2.09
SIX4Q9UIU6 U3.40-201ENST00000408706 208 ntBASIC2□□□□□ -2.09
SIX4Q9UIU6 RNA5SP270-201ENST00000411361 118 ntBASIC2□□□□□ -2.09
SIX4Q9UIU6 SRIP3-201ENST00000413200 219 ntBASIC2□□□□□ -2.09
SIX4Q9UIU6 RPL23AP36-201ENST00000413895 458 ntBASIC2□□□□□ -2.09
SIX4Q9UIU6 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2□□□□□ -2.09
SIX4Q9UIU6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2□□□□□ -2.09
SIX4Q9UIU6 MRPS10P1-201ENST00000448483 130 ntBASIC2□□□□□ -2.09
SIX4Q9UIU6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2□□□□□ -2.09
SIX4Q9UIU6 SNORD127-201ENST00000458892 86 ntBASIC2□□□□□ -2.09
SIX4Q9UIU6 RNU6-221P-201ENST00000459541 99 ntBASIC2□□□□□ -2.09
SIX4Q9UIU6 RNU6-948P-201ENST00000516374 107 ntBASIC2□□□□□ -2.09
SIX4Q9UIU6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2□□□□□ -2.09
SIX4Q9UIU6 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2□□□□□ -2.09
SIX4Q9UIU6 MIR3145-201ENST00000580727 82 ntBASIC2□□□□□ -2.09
SIX4Q9UIU6 U6.115-201ENST00000636045 103 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms