Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 RNU6-282P-201ENST00000365357 103 ntBASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 MIR193B-201ENST00000384907 83 ntBASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 MIR136-201ENST00000385207 82 ntBASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 MIR1302-7-201ENST00000408841 72 ntBASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 RNU2-9P-201ENST00000410194 145 ntBASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 RNU6-613P-201ENST00000410412 108 ntBASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 MTND1P4-201ENST00000435196 415 ntBASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 RPS3AP17-201ENST00000472594 777 ntBASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 AC092436.3-201ENST00000511788 257 ntBASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 MIR548AO-201ENST00000579992 96 ntBASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 AC245014.2-201ENST00000603689 287 ntBASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 RBM11P1-201ENST00000604951 799 ntBASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 AC246785.4-201ENST00000605374 287 ntBASIC-0.17□□□□□ -2.44
VPS29Q9UBQ0 MIR330-201ENST00000362196 94 ntBASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 SNORA20B-201ENST00000384220 132 ntBASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 RNU6-517P-201ENST00000384362 110 ntBASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 RNU6-325P-201ENST00000411132 105 ntBASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 AC018865.2-201ENST00000423631 129 ntBASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 RNU6-863P-201ENST00000515989 104 ntBASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 SNORA18.7-201ENST00000516910 131 ntBASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 AP003461.1-201ENST00000528866 78 ntBASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 AC011712.1-201ENST00000588959 234 ntBASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 SNORA25.18-201ENST00000607153 114 ntBASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 AC016597.2-201ENST00000613256 341 ntBASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 AP001506.1-201ENST00000615444 211 ntBASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 AC104260.1-201ENST00000616660 539 ntBASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 MIR371B-201ENST00000638082 66 ntBASIC-0.18□□□□□ -2.44
VPS29Q9UBQ0 RNU6-407P-201ENST00000365280 104 ntBASIC-0.19□□□□□ -2.44
VPS29Q9UBQ0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.19□□□□□ -2.44
VPS29Q9UBQ0 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.19□□□□□ -2.44
VPS29Q9UBQ0 AC133104.1-201ENST00000429100 218 ntBASIC-0.19□□□□□ -2.44
VPS29Q9UBQ0 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.19□□□□□ -2.44
VPS29Q9UBQ0 RNU7-180P-201ENST00000459240 63 ntBASIC-0.19□□□□□ -2.44
VPS29Q9UBQ0 AC018710.1-201ENST00000506509 158 ntBASIC-0.19□□□□□ -2.44
VPS29Q9UBQ0 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.19□□□□□ -2.44
VPS29Q9UBQ0 AC091144.1-201ENST00000519573 138 ntBASIC-0.19□□□□□ -2.44
VPS29Q9UBQ0 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.19□□□□□ -2.44
VPS29Q9UBQ0 AC112693.2-201ENST00000556538 232 ntBASIC-0.19□□□□□ -2.44
VPS29Q9UBQ0 MIR5190-201ENST00000581537 80 ntBASIC-0.19□□□□□ -2.44
VPS29Q9UBQ0 HULC.1-201ENST00000612720 240 ntBASIC-0.19□□□□□ -2.44
VPS29Q9UBQ0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.2□□□□□ -2.44
VPS29Q9UBQ0 SNORD68-201ENST00000363214 84 ntBASIC-0.2□□□□□ -2.44
VPS29Q9UBQ0 RNA5SP63-201ENST00000391225 112 ntBASIC-0.2□□□□□ -2.44
VPS29Q9UBQ0 AL139396.1-201ENST00000421137 167 ntBASIC-0.2□□□□□ -2.44
VPS29Q9UBQ0 MRPS10P2-201ENST00000431226 381 ntBASIC-0.2□□□□□ -2.44
VPS29Q9UBQ0 CCDC34P1-201ENST00000507441 517 ntBASIC-0.2□□□□□ -2.44
VPS29Q9UBQ0 RNA5SP20-201ENST00000515976 84 ntBASIC-0.2□□□□□ -2.44
VPS29Q9UBQ0 RNU6-977P-201ENST00000516411 103 ntBASIC-0.2□□□□□ -2.44
VPS29Q9UBQ0 MIR2115-201ENST00000516657 100 ntBASIC-0.2□□□□□ -2.44
VPS29Q9UBQ0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.2□□□□□ -2.44
VPS29Q9UBQ0 MIR4290-201ENST00000583807 95 ntBASIC-0.2□□□□□ -2.44
VPS29Q9UBQ0 AC104408.1-201ENST00000605241 170 ntBASIC-0.2□□□□□ -2.44
VPS29Q9UBQ0 uc_338.16-201ENST00000621804 95 ntBASIC-0.2□□□□□ -2.44
VPS29Q9UBQ0 MIR4251-201ENST00000635819 61 ntBASIC-0.2□□□□□ -2.44
VPS29Q9UBQ0 SNORD114-5-201ENST00000362928 70 ntBASIC-0.21□□□□□ -2.44
VPS29Q9UBQ0 SNORD118-201ENST00000363593 134 ntBASIC-0.21□□□□□ -2.44
VPS29Q9UBQ0 SNORD115-32-201ENST00000364079 82 ntBASIC-0.21□□□□□ -2.44
VPS29Q9UBQ0 AL358176.2-201ENST00000425769 204 ntBASIC-0.21□□□□□ -2.44
VPS29Q9UBQ0 AL356010.1-201ENST00000456364 102 ntBASIC-0.21□□□□□ -2.44
VPS29Q9UBQ0 MTND4P7-201ENST00000523876 130 ntBASIC-0.21□□□□□ -2.44
VPS29Q9UBQ0 MIR1273G-201ENST00000577677 100 ntBASIC-0.21□□□□□ -2.44
VPS29Q9UBQ0 AL391834.2-201ENST00000609982 546 ntBASIC-0.21□□□□□ -2.44
VPS29Q9UBQ0 RNU6-933P-201ENST00000384424 107 ntBASIC-0.22□□□□□ -2.44
VPS29Q9UBQ0 SNORA40.3-201ENST00000390964 122 ntBASIC-0.22□□□□□ -2.44
VPS29Q9UBQ0 SEPT7P4-201ENST00000437076 306 ntBASIC-0.22□□□□□ -2.44
VPS29Q9UBQ0 AL033528.1-201ENST00000453780 140 ntBASIC-0.22□□□□□ -2.44
VPS29Q9UBQ0 RNU6-107P-201ENST00000516643 102 ntBASIC-0.22□□□□□ -2.44
VPS29Q9UBQ0 RNA5SP94-201ENST00000516917 108 ntBASIC-0.22□□□□□ -2.44
VPS29Q9UBQ0 MTND2P38-201ENST00000522536 667 ntBASIC-0.22□□□□□ -2.44
VPS29Q9UBQ0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.22□□□□□ -2.44
VPS29Q9UBQ0 CPDP1-201ENST00000579660 283 ntBASIC-0.22□□□□□ -2.44
VPS29Q9UBQ0 AC012433.1-201ENST00000588916 398 ntBASIC-0.22□□□□□ -2.44
VPS29Q9UBQ0 AC008536.2-201ENST00000607284 349 ntBASIC-0.22□□□□□ -2.44
VPS29Q9UBQ0 AC004223.4-201ENST00000612426 332 ntBASIC-0.22□□□□□ -2.44
VPS29Q9UBQ0 RNU6-181P-201ENST00000363225 107 ntBASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 RNU6-280P-201ENST00000364145 104 ntBASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 SNORA32.1-201ENST00000364514 115 ntBASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 RNU4-9P-201ENST00000364951 139 ntBASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 AC117470.1-201ENST00000381974 330 ntBASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 MIR153-2-201ENST00000385225 87 ntBASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 RNU6-700P-201ENST00000391043 107 ntBASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 MTND4P32-201ENST00000437189 1237 ntBASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 MTCO1P29-201ENST00000496868 288 ntBASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms