Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AL357134.1-201ENST00000445848 426 ntBASIC2.69□□□□□ -1.98
KCMF1Q9P0J7 AC091021.1-201ENST00000468051 388 ntBASIC2.69□□□□□ -1.98
KCMF1Q9P0J7 AC018868.1-201ENST00000491307 315 ntBASIC2.69□□□□□ -1.98
KCMF1Q9P0J7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.69□□□□□ -1.98
KCMF1Q9P0J7 MIR3133-201ENST00000583157 78 ntBASIC2.69□□□□□ -1.98
KCMF1Q9P0J7 AL033523.1-201ENST00000605153 153 ntBASIC2.69□□□□□ -1.98
KCMF1Q9P0J7 AC004832.4-201ENST00000608952 331 ntBASIC2.69□□□□□ -1.98
KCMF1Q9P0J7 Y_RNA.802-201ENST00000614892 130 ntBASIC2.69□□□□□ -1.98
KCMF1Q9P0J7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.69□□□□□ -1.98
KCMF1Q9P0J7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.69□□□□□ -1.98
KCMF1Q9P0J7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 Y_RNA.8-201ENST00000362353 102 ntBASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 RNU6-746P-201ENST00000384112 109 ntBASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 RNU6-804P-201ENST00000384286 107 ntBASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 MIR181A2-201ENST00000384863 110 ntBASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 MIR627-201ENST00000384979 97 ntBASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 MIR626-201ENST00000385032 94 ntBASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 RNU6-381P-201ENST00000391259 108 ntBASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 RNA5SP492-201ENST00000411330 114 ntBASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 SNORA59A-201ENST00000459326 152 ntBASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 MIR548AY-201ENST00000617669 107 ntBASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
KCMF1Q9P0J7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.67□□□□□ -1.98
KCMF1Q9P0J7 SNORA5B-201ENST00000363786 132 ntBASIC2.67□□□□□ -1.98
KCMF1Q9P0J7 snoU2_19.4-201ENST00000364329 80 ntBASIC2.67□□□□□ -1.98
KCMF1Q9P0J7 SNORA25B-201ENST00000365507 128 ntBASIC2.67□□□□□ -1.98
KCMF1Q9P0J7 Y_RNA.412-201ENST00000384001 104 ntBASIC2.67□□□□□ -1.98
KCMF1Q9P0J7 SNORA11.2-201ENST00000408318 127 ntBASIC2.67□□□□□ -1.98
KCMF1Q9P0J7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.67□□□□□ -1.98
KCMF1Q9P0J7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.67□□□□□ -1.98
KCMF1Q9P0J7 AL135938.1-201ENST00000443141 297 ntBASIC2.67□□□□□ -1.98
KCMF1Q9P0J7 RNU7-115P-201ENST00000516433 55 ntBASIC2.67□□□□□ -1.98
KCMF1Q9P0J7 RNA5SP367-201ENST00000516557 118 ntBASIC2.67□□□□□ -1.98
KCMF1Q9P0J7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.67□□□□□ -1.98
KCMF1Q9P0J7 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.67□□□□□ -1.98
KCMF1Q9P0J7 AC006435.5-201ENST00000624486 112 ntBASIC2.67□□□□□ -1.98
KCMF1Q9P0J7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KCMF1Q9P0J7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 AL161431.1-201ENST00000618966 4205 ntBASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 MIR340-201ENST00000362125 95 ntBASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 Y_RNA.121-201ENST00000363309 113 ntBASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 RNU6-969P-201ENST00000383900 105 ntBASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 Y_RNA.506-201ENST00000384494 102 ntBASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 RNU6-136P-201ENST00000384663 107 ntBASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 MIR1253-201ENST00000408273 105 ntBASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 CR769767.1-201ENST00000436337 346 ntBASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 Y_RNA.797-201ENST00000515977 94 ntBASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 RN7SKP164-201ENST00000516138 266 ntBASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 RNU6-856P-201ENST00000516959 98 ntBASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 POLR3GP1-201ENST00000594073 261 ntBASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.66□□□□□ -1.98
KCMF1Q9P0J7 AC108206.1-201ENST00000570186 4159 ntBASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 MIR367-201ENST00000362299 68 ntBASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 Y_RNA.170-201ENST00000363746 110 ntBASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 RNU6-1180P-201ENST00000364935 107 ntBASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 RNU6-187P-201ENST00000384139 106 ntBASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 SNORA36B-201ENST00000410438 131 ntBASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 RNA5SP511-201ENST00000410487 115 ntBASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 RNU6-1135P-201ENST00000411083 103 ntBASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 RNU5E-9P-201ENST00000411164 104 ntBASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 AL135786.1-201ENST00000415892 214 ntBASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 UBBP3-201ENST00000445497 241 ntBASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 RPS27AP9-201ENST00000477681 438 ntBASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 MIR3144-201ENST00000579460 79 ntBASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 MIR4724-201ENST00000579485 89 ntBASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 MIR4438-201ENST00000585271 93 ntBASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 AP003357.1-201ENST00000604497 148 ntBASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 AC005972.2-201ENST00000604690 348 ntBASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 CENPCP1-201ENST00000533085 2578 ntBASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
KCMF1Q9P0J7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 RNU4-13P-201ENST00000364019 141 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 RNU6-144P-201ENST00000383951 107 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 RNU6-125P-201ENST00000384505 107 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 MIR526A2-201ENST00000390198 65 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 RNU6-394P-201ENST00000410735 107 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 RNU6-383P-201ENST00000410864 94 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 AC060773.1-201ENST00000421698 310 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 AC092427.1-202ENST00000430569 476 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 HMGN2P34-201ENST00000437647 269 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 AC009238.1-201ENST00000442165 424 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms