Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RNU6-1199P-201ENST00000411249 104 ntBASIC2.29□□□□□ -2.04
NCKIPSDQ9NZQ3 EDDM3CP-201ENST00000415977 425 ntBASIC2.29□□□□□ -2.04
NCKIPSDQ9NZQ3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.29□□□□□ -2.04
NCKIPSDQ9NZQ3 AL137159.1-201ENST00000452808 512 ntBASIC2.29□□□□□ -2.04
NCKIPSDQ9NZQ3 AL138752.1-201ENST00000452964 351 ntBASIC2.29□□□□□ -2.04
NCKIPSDQ9NZQ3 PRELID3BP1-201ENST00000457142 540 ntBASIC2.29□□□□□ -2.04
NCKIPSDQ9NZQ3 RNU7-14P-201ENST00000459331 62 ntBASIC2.29□□□□□ -2.04
NCKIPSDQ9NZQ3 RNU2-31P-201ENST00000516954 155 ntBASIC2.29□□□□□ -2.04
NCKIPSDQ9NZQ3 SCARNA24.2-201ENST00000516968 130 ntBASIC2.29□□□□□ -2.04
NCKIPSDQ9NZQ3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.29□□□□□ -2.04
NCKIPSDQ9NZQ3 AC005176.2-201ENST00000596933 147 ntBASIC2.29□□□□□ -2.04
NCKIPSDQ9NZQ3 SNORD11B-201ENST00000607707 90 ntBASIC2.29□□□□□ -2.04
NCKIPSDQ9NZQ3 AC091932.3-201ENST00000624223 323 ntBASIC2.29□□□□□ -2.04
NCKIPSDQ9NZQ3 AC068205.3-201ENST00000636385 468 ntBASIC2.29□□□□□ -2.04
NCKIPSDQ9NZQ3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NCKIPSDQ9NZQ3 Y_RNA.44-201ENST00000362676 108 ntBASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 RNU6-454P-201ENST00000364292 107 ntBASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 Y_RNA.297-201ENST00000364950 91 ntBASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 RNA5SP270-201ENST00000411361 118 ntBASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 AL139156.1-201ENST00000412785 841 ntBASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 PIGPP3-201ENST00000425307 415 ntBASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 RPS15AP28-201ENST00000435088 386 ntBASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 RNU7-110P-201ENST00000516891 62 ntBASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 MIR5694-201ENST00000581190 76 ntBASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 MIR4524B-201ENST00000581569 115 ntBASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 AL031274.2-201ENST00000599419 203 ntBASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 AC022441.3-201ENST00000605737 136 ntBASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 AC025754.2-201ENST00000606491 432 ntBASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 AL365434.2-201ENST00000607979 234 ntBASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 AC046143.2-201ENST00000609789 160 ntBASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
NCKIPSDQ9NZQ3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.28□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR410-201ENST00000362222 80 ntBASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 SNORD115-3-201ENST00000363100 82 ntBASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.269-201ENST00000364685 89 ntBASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.498-201ENST00000384460 102 ntBASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.569-201ENST00000384749 103 ntBASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR1298-201ENST00000408783 112 ntBASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 MTCO1P5-201ENST00000433573 344 ntBASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 HMGN2P18-201ENST00000450680 270 ntBASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 AC011753.1-201ENST00000451001 220 ntBASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 SUMO1P2-201ENST00000452524 304 ntBASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 AC093259.1-201ENST00000509755 300 ntBASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 DEFB122-202ENST00000569013 197 ntBASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 AC022202.1-201ENST00000613515 211 ntBASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 AC004467.1-201ENST00000615678 330 ntBASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 FTX_2.1-201ENST00000618816 94 ntBASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
NCKIPSDQ9NZQ3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.274-201ENST00000364714 101 ntBASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 RNU6-1264P-201ENST00000383891 107 ntBASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.418-201ENST00000384029 102 ntBASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 SRIP3-201ENST00000413200 219 ntBASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 RPL23AP36-201ENST00000413895 458 ntBASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 SUMO1P3-201ENST00000439961 304 ntBASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 AC245102.2-201ENST00000448956 180 ntBASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 COX6CP14-201ENST00000469580 174 ntBASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 HMGN2P9-201ENST00000476875 229 ntBASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 HMGB3P3-201ENST00000510526 400 ntBASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 AC004792.1-201ENST00000614523 137 ntBASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 AL590240.4-201ENST00000616908 390 ntBASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR6132-201ENST00000622083 109 ntBASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR6766-201ENST00000622641 72 ntBASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR3674-201ENST00000636576 68 ntBASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 AP000553.5-201ENST00000641933 54 ntBASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NCKIPSDQ9NZQ3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 SNORA25.1-201ENST00000362326 128 ntBASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 RNU6-545P-201ENST00000362681 104 ntBASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 SNORD114-1-201ENST00000362705 72 ntBASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.83-201ENST00000363005 113 ntBASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.136-201ENST00000363444 102 ntBASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.180-201ENST00000363867 113 ntBASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 SNORA3A-201ENST00000364113 130 ntBASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.331-201ENST00000365267 102 ntBASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 RNU6-514P-201ENST00000384208 107 ntBASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR524-201ENST00000385242 87 ntBASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR548B-201ENST00000385247 97 ntBASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 MRPS10P1-201ENST00000448483 130 ntBASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 NDUFB4P10-201ENST00000452541 359 ntBASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 snoU13.23-201ENST00000458863 104 ntBASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 RNU2-12P-201ENST00000517216 168 ntBASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 AL162424.1-201ENST00000602325 221 ntBASIC2.25□□□□□ -2.05
NCKIPSDQ9NZQ3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms