Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 RPS29P28-201ENST00000446439 141 ntBASIC1.09□□□□□ -2.23
SMPD3Q9NY59 RNU7-94P-201ENST00000459576 63 ntBASIC1.09□□□□□ -2.23
SMPD3Q9NY59 AC010469.2-201ENST00000496412 480 ntBASIC1.09□□□□□ -2.23
SMPD3Q9NY59 AC116353.2-201ENST00000505332 712 ntBASIC1.09□□□□□ -2.23
SMPD3Q9NY59 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.09□□□□□ -2.23
SMPD3Q9NY59 SNORA31.10-201ENST00000516482 106 ntBASIC1.09□□□□□ -2.23
SMPD3Q9NY59 SCARNA16.2-201ENST00000516520 172 ntBASIC1.09□□□□□ -2.23
SMPD3Q9NY59 RNU1-92P-201ENST00000517017 135 ntBASIC1.09□□□□□ -2.23
SMPD3Q9NY59 AC022868.1-201ENST00000517767 391 ntBASIC1.09□□□□□ -2.23
SMPD3Q9NY59 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.09□□□□□ -2.23
SMPD3Q9NY59 AC004584.2-201ENST00000570407 410 ntBASIC1.09□□□□□ -2.23
SMPD3Q9NY59 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.09□□□□□ -2.23
SMPD3Q9NY59 MIR3660-201ENST00000584845 100 ntBASIC1.09□□□□□ -2.23
SMPD3Q9NY59 BX284668.6-201ENST00000606899 438 ntBASIC1.09□□□□□ -2.23
SMPD3Q9NY59 AC104260.1-201ENST00000616660 539 ntBASIC1.09□□□□□ -2.23
SMPD3Q9NY59 AC027335.2-201ENST00000624030 375 ntBASIC1.09□□□□□ -2.23
SMPD3Q9NY59 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
SMPD3Q9NY59 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.08□□□□□ -2.24
SMPD3Q9NY59 RNU6-845P-201ENST00000362578 103 ntBASIC1.08□□□□□ -2.24
SMPD3Q9NY59 RNA5SP361-201ENST00000362686 118 ntBASIC1.08□□□□□ -2.24
SMPD3Q9NY59 Y_RNA.248-201ENST00000364501 109 ntBASIC1.08□□□□□ -2.24
SMPD3Q9NY59 Y_RNA.279-201ENST00000364763 95 ntBASIC1.08□□□□□ -2.24
SMPD3Q9NY59 Y_RNA.358-201ENST00000365491 99 ntBASIC1.08□□□□□ -2.24
SMPD3Q9NY59 RNU6-1145P-201ENST00000384246 107 ntBASIC1.08□□□□□ -2.24
SMPD3Q9NY59 SNORA75.4-201ENST00000391278 119 ntBASIC1.08□□□□□ -2.24
SMPD3Q9NY59 RNU6-876P-201ENST00000391295 104 ntBASIC1.08□□□□□ -2.24
SMPD3Q9NY59 Y_RNA.638-201ENST00000459374 113 ntBASIC1.08□□□□□ -2.24
SMPD3Q9NY59 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
SMPD3Q9NY59 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.08□□□□□ -2.24
SMPD3Q9NY59 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.08□□□□□ -2.24
SMPD3Q9NY59 AC074133.1-201ENST00000515696 183 ntBASIC1.08□□□□□ -2.24
SMPD3Q9NY59 SUMO2P16-201ENST00000519475 264 ntBASIC1.08□□□□□ -2.24
SMPD3Q9NY59 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.08□□□□□ -2.24
SMPD3Q9NY59 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.08□□□□□ -2.24
SMPD3Q9NY59 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.08□□□□□ -2.24
SMPD3Q9NY59 AL162424.1-201ENST00000602325 221 ntBASIC1.08□□□□□ -2.24
SMPD3Q9NY59 AL022345.2-201ENST00000606307 135 ntBASIC1.08□□□□□ -2.24
SMPD3Q9NY59 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.08□□□□□ -2.24
SMPD3Q9NY59 AC092794.2-201ENST00000620933 563 ntBASIC1.08□□□□□ -2.24
SMPD3Q9NY59 AL513423.1-201ENST00000621695 132 ntBASIC1.08□□□□□ -2.24
SMPD3Q9NY59 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SMPD3Q9NY59 AC073544.1-201ENST00000600110 1595 ntBASIC1.08□□□□□ -2.24
SMPD3Q9NY59 AL391516.1-201ENST00000554380 2449 ntBASIC1.07□□□□□ -2.24
SMPD3Q9NY59 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SMPD3Q9NY59 Y_RNA.166-201ENST00000363730 102 ntBASIC1.07□□□□□ -2.24
SMPD3Q9NY59 Y_RNA.505-201ENST00000384489 102 ntBASIC1.07□□□□□ -2.24
SMPD3Q9NY59 RNU6-440P-201ENST00000390882 105 ntBASIC1.07□□□□□ -2.24
SMPD3Q9NY59 MTCYBP4-201ENST00000401524 249 ntBASIC1.07□□□□□ -2.24
SMPD3Q9NY59 AL034345.1-201ENST00000407768 123 ntBASIC1.07□□□□□ -2.24
SMPD3Q9NY59 ELOCP21-201ENST00000412558 336 ntBASIC1.07□□□□□ -2.24
SMPD3Q9NY59 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.07□□□□□ -2.24
SMPD3Q9NY59 AC009474.2-201ENST00000451383 136 ntBASIC1.07□□□□□ -2.24
SMPD3Q9NY59 PCNPP5-201ENST00000452246 481 ntBASIC1.07□□□□□ -2.24
SMPD3Q9NY59 Y_RNA.635-201ENST00000459041 101 ntBASIC1.07□□□□□ -2.24
SMPD3Q9NY59 RPL17P19-201ENST00000489069 552 ntBASIC1.07□□□□□ -2.24
SMPD3Q9NY59 RN7SKP49-201ENST00000516675 260 ntBASIC1.07□□□□□ -2.24
SMPD3Q9NY59 MIR3684-201ENST00000579779 74 ntBASIC1.07□□□□□ -2.24
SMPD3Q9NY59 AC073413.2-201ENST00000604332 360 ntBASIC1.07□□□□□ -2.24
SMPD3Q9NY59 AL357075.2-201ENST00000614906 189 ntBASIC1.07□□□□□ -2.24
SMPD3Q9NY59 AC018630.2-201ENST00000534866 2403 ntBASIC1.07□□□□□ -2.24
SMPD3Q9NY59 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 MIR337-201ENST00000362281 93 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 SNORA20B-201ENST00000384220 132 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 Y_RNA.498-201ENST00000384460 102 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 MIR764-201ENST00000390811 85 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 RNU11-5P-201ENST00000391216 129 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 MTND1P2-201ENST00000430604 821 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 U8.22-201ENST00000459141 133 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 MTND4P17-201ENST00000470444 350 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.06□□□□□ -2.24
SMPD3Q9NY59 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.06□□□□□ -2.24
SMPD3Q9NY59 AC108729.3-201ENST00000513484 108 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 AC097462.1-201ENST00000514125 324 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 AC018448.1-201ENST00000552843 316 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 AL390123.1-201ENST00000603216 237 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 AL513534.2-201ENST00000603836 250 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 AL021879.1-201ENST00000611756 288 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 MIR1244-1-201ENST00000612829 85 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 MIR1244-3-201ENST00000635744 85 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 MIR1244-2-201ENST00000636449 85 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 AL669831.3-213ENST00000636676 183 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 MIR1244-4-202ENST00000636813 85 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 AC068647.2-201ENST00000637380 353 ntBASIC1.06□□□□□ -2.24
SMPD3Q9NY59 MIR222-201ENST00000384992 110 ntBASIC1.05□□□□□ -2.24
SMPD3Q9NY59 MT-TL1-201ENST00000386347 75 ntBASIC1.05□□□□□ -2.24
SMPD3Q9NY59 AL355796.1-201ENST00000406706 323 ntBASIC1.05□□□□□ -2.24
SMPD3Q9NY59 Y_RNA.599-201ENST00000410489 109 ntBASIC1.05□□□□□ -2.24
SMPD3Q9NY59 MTCO3P19-201ENST00000415864 321 ntBASIC1.05□□□□□ -2.24
SMPD3Q9NY59 MRPL35P3-201ENST00000421557 364 ntBASIC1.05□□□□□ -2.24
SMPD3Q9NY59 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.05□□□□□ -2.24
SMPD3Q9NY59 SNORA31.4-201ENST00000516049 129 ntBASIC1.05□□□□□ -2.24
SMPD3Q9NY59 Y_RNA.691-201ENST00000516611 103 ntBASIC1.05□□□□□ -2.24
SMPD3Q9NY59 RNU6-1213P-201ENST00000517075 94 ntBASIC1.05□□□□□ -2.24
SMPD3Q9NY59 RNU7-172P-201ENST00000517125 64 ntBASIC1.05□□□□□ -2.24
SMPD3Q9NY59 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.05□□□□□ -2.24
SMPD3Q9NY59 RPL21P9-201ENST00000556149 474 ntBASIC1.05□□□□□ -2.24
SMPD3Q9NY59 TPTEP1-208ENST00000636884 213 ntBASIC1.05□□□□□ -2.24
SMPD3Q9NY59 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.05□□□□□ -2.24
SMPD3Q9NY59 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms