Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 U2.3-201ENST00000617785 191 ntBASIC2.4□□□□□ -2.03
RLIMQ9NVW2 U2.19-201ENST00000618602 191 ntBASIC2.4□□□□□ -2.03
RLIMQ9NVW2 RNU2-1-201ENST00000618664 191 ntBASIC2.4□□□□□ -2.03
RLIMQ9NVW2 U2.6-201ENST00000619225 191 ntBASIC2.4□□□□□ -2.03
RLIMQ9NVW2 U2.5-201ENST00000619465 191 ntBASIC2.4□□□□□ -2.03
RLIMQ9NVW2 U2.10-201ENST00000620268 191 ntBASIC2.4□□□□□ -2.03
RLIMQ9NVW2 AC010297.1-201ENST00000623948 149 ntBASIC2.4□□□□□ -2.03
RLIMQ9NVW2 AC006435.5-201ENST00000624486 112 ntBASIC2.4□□□□□ -2.03
RLIMQ9NVW2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RLIMQ9NVW2 MAPK10-266ENST00000641066 6555 ntBASIC2.4□□□□□ -2.03
RLIMQ9NVW2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RLIMQ9NVW2 CENPCP1-201ENST00000533085 2578 ntBASIC2.39□□□□□ -2.03
RLIMQ9NVW2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RLIMQ9NVW2 RNA5SP493-201ENST00000364115 91 ntBASIC2.39□□□□□ -2.03
RLIMQ9NVW2 RNY1-201ENST00000364228 113 ntBASIC2.39□□□□□ -2.03
RLIMQ9NVW2 Y_RNA.293-201ENST00000364908 93 ntBASIC2.39□□□□□ -2.03
RLIMQ9NVW2 Y_RNA.310-201ENST00000365063 113 ntBASIC2.39□□□□□ -2.03
RLIMQ9NVW2 Y_RNA.368-201ENST00000365547 113 ntBASIC2.39□□□□□ -2.03
RLIMQ9NVW2 SNORA72.4-201ENST00000384174 132 ntBASIC2.39□□□□□ -2.03
RLIMQ9NVW2 RNU6-376P-201ENST00000384731 106 ntBASIC2.39□□□□□ -2.03
RLIMQ9NVW2 MIR9-1-201ENST00000385198 89 ntBASIC2.39□□□□□ -2.03
RLIMQ9NVW2 NDUFB4P4-201ENST00000404822 243 ntBASIC2.39□□□□□ -2.03
RLIMQ9NVW2 Y_RNA.626-201ENST00000411288 95 ntBASIC2.39□□□□□ -2.03
RLIMQ9NVW2 AL139156.1-201ENST00000412785 841 ntBASIC2.39□□□□□ -2.03
RLIMQ9NVW2 Z98949.2-201ENST00000440996 144 ntBASIC2.39□□□□□ -2.03
RLIMQ9NVW2 Y_RNA.637-201ENST00000459424 114 ntBASIC2.39□□□□□ -2.03
RLIMQ9NVW2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.39□□□□□ -2.03
RLIMQ9NVW2 RNU7-172P-201ENST00000517125 64 ntBASIC2.39□□□□□ -2.03
RLIMQ9NVW2 SUMO2P18-201ENST00000518873 252 ntBASIC2.39□□□□□ -2.03
RLIMQ9NVW2 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.39□□□□□ -2.03
RLIMQ9NVW2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RLIMQ9NVW2 MIR6073-201ENST00000352083 89 ntBASIC2.38□□□□□ -2.03
RLIMQ9NVW2 RNU4-13P-201ENST00000364019 141 ntBASIC2.38□□□□□ -2.03
RLIMQ9NVW2 RNU6-1164P-201ENST00000364428 107 ntBASIC2.38□□□□□ -2.03
RLIMQ9NVW2 RNU6-923P-201ENST00000364753 107 ntBASIC2.38□□□□□ -2.03
RLIMQ9NVW2 RN7SKP284-201ENST00000411002 343 ntBASIC2.38□□□□□ -2.03
RLIMQ9NVW2 BX510359.4-201ENST00000423750 193 ntBASIC2.38□□□□□ -2.03
RLIMQ9NVW2 CR769767.1-201ENST00000436337 346 ntBASIC2.38□□□□□ -2.03
RLIMQ9NVW2 AC107083.1-201ENST00000439643 279 ntBASIC2.38□□□□□ -2.03
RLIMQ9NVW2 SNORD2.1-201ENST00000458762 69 ntBASIC2.38□□□□□ -2.03
RLIMQ9NVW2 RPS29P21-201ENST00000496272 170 ntBASIC2.38□□□□□ -2.03
RLIMQ9NVW2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.38□□□□□ -2.03
RLIMQ9NVW2 RNY3P16-201ENST00000516338 101 ntBASIC2.38□□□□□ -2.03
RLIMQ9NVW2 RNA5SP282-201ENST00000516355 108 ntBASIC2.38□□□□□ -2.03
RLIMQ9NVW2 MIR4282-201ENST00000583613 67 ntBASIC2.38□□□□□ -2.03
RLIMQ9NVW2 AL033523.1-201ENST00000605153 153 ntBASIC2.38□□□□□ -2.03
RLIMQ9NVW2 AC004832.4-201ENST00000608952 331 ntBASIC2.38□□□□□ -2.03
RLIMQ9NVW2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
RLIMQ9NVW2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
RLIMQ9NVW2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
RLIMQ9NVW2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
RLIMQ9NVW2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RLIMQ9NVW2 MIR411-201ENST00000362239 96 ntBASIC2.37□□□□□ -2.03
RLIMQ9NVW2 SNORD114-7-201ENST00000362520 77 ntBASIC2.37□□□□□ -2.03
RLIMQ9NVW2 Y_RNA.111-201ENST00000363248 100 ntBASIC2.37□□□□□ -2.03
RLIMQ9NVW2 Y_RNA.308-201ENST00000365043 101 ntBASIC2.37□□□□□ -2.03
RLIMQ9NVW2 RNY4P28-201ENST00000365281 93 ntBASIC2.37□□□□□ -2.03
RLIMQ9NVW2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.37□□□□□ -2.03
RLIMQ9NVW2 RNA5SP323-201ENST00000391094 133 ntBASIC2.37□□□□□ -2.03
RLIMQ9NVW2 RNA5SP467-201ENST00000391274 118 ntBASIC2.37□□□□□ -2.03
RLIMQ9NVW2 RNA5SP181-201ENST00000410246 98 ntBASIC2.37□□□□□ -2.03
RLIMQ9NVW2 AC010154.1-201ENST00000425857 269 ntBASIC2.37□□□□□ -2.03
RLIMQ9NVW2 HSPE1P13-201ENST00000451143 297 ntBASIC2.37□□□□□ -2.03
RLIMQ9NVW2 RNU1-131P-201ENST00000458943 161 ntBASIC2.37□□□□□ -2.03
RLIMQ9NVW2 RNU7-141P-201ENST00000459304 62 ntBASIC2.37□□□□□ -2.03
RLIMQ9NVW2 AC117454.1-201ENST00000491120 168 ntBASIC2.37□□□□□ -2.03
RLIMQ9NVW2 AC097462.1-201ENST00000514125 324 ntBASIC2.37□□□□□ -2.03
RLIMQ9NVW2 RNU6-1278P-201ENST00000516130 107 ntBASIC2.37□□□□□ -2.03
RLIMQ9NVW2 SNORD14A-201ENST00000606526 91 ntBASIC2.37□□□□□ -2.03
RLIMQ9NVW2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
RLIMQ9NVW2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RLIMQ9NVW2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RLIMQ9NVW2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RLIMQ9NVW2 RNU6-862P-201ENST00000362804 105 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 RNU1-22P-201ENST00000363334 158 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 MIR634-201ENST00000385208 97 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 MIR29C-201ENST00000385231 88 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 MT-TR-201ENST00000387439 65 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 RNU6-493P-201ENST00000391321 108 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 RNA5SP511-201ENST00000410487 115 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 RNU2-52P-201ENST00000410680 190 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 Y_RNA.793-201ENST00000411222 111 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 OOSP1P1-201ENST00000423265 274 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 AL353689.1-201ENST00000438895 199 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 SNORD109B-201ENST00000458961 67 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 SNORD109A-201ENST00000459128 67 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 SNORA59A-201ENST00000459326 152 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 AL049873.1-201ENST00000480540 376 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.36□□□□□ -2.03
RLIMQ9NVW2 MIR5692C2-201ENST00000577959 77 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 ELOCP29-201ENST00000588193 334 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 AC073413.2-201ENST00000604332 360 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 AL137847.3-201ENST00000611521 109 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.36□□□□□ -2.03
RLIMQ9NVW2 AC013791.1-201ENST00000616619 62 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 U6.73-201ENST00000619194 103 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 AL365265.1-201ENST00000621045 234 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 MIR338-201ENST00000636369 67 ntBASIC2.36□□□□□ -2.03
RLIMQ9NVW2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms