Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 MIR1244-1-201ENST00000612829 85 ntBASIC1.26□□□□□ -2.21
ZCCHC3Q9NUD5 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.26□□□□□ -2.21
ZCCHC3Q9NUD5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.26□□□□□ -2.21
ZCCHC3Q9NUD5 MIR1244-3-201ENST00000635744 85 ntBASIC1.26□□□□□ -2.21
ZCCHC3Q9NUD5 MIR1244-2-201ENST00000636449 85 ntBASIC1.26□□□□□ -2.21
ZCCHC3Q9NUD5 MIR1244-4-202ENST00000636813 85 ntBASIC1.26□□□□□ -2.21
ZCCHC3Q9NUD5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
ZCCHC3Q9NUD5 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 MIR660-201ENST00000385235 97 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 RNU11-5P-201ENST00000391216 129 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 RNU6-876P-201ENST00000391295 104 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 AC018865.2-201ENST00000423631 129 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 Y_RNA.635-201ENST00000459041 101 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 RNU6-625P-201ENST00000459412 107 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 RPL39P38-201ENST00000467018 153 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 MTND4P17-201ENST00000470444 350 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 RNA5SP20-201ENST00000515976 84 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 MIR2355-201ENST00000517199 87 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 AL161670.1-201ENST00000554348 137 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 RPL21P9-201ENST00000556149 474 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 AC005828.6-201ENST00000606610 232 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 SNORA28-201ENST00000606769 126 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 MIR7974-201ENST00000615835 79 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 AC022306.2-201ENST00000617563 647 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 U6.115-201ENST00000636045 103 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 MIR3674-201ENST00000636576 68 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 TPTEP1-208ENST00000636884 213 ntBASIC1.25□□□□□ -2.21
ZCCHC3Q9NUD5 RNU6-99P-201ENST00000364721 107 ntBASIC1.24□□□□□ -2.21
ZCCHC3Q9NUD5 SNORD81.2-201ENST00000365153 76 ntBASIC1.24□□□□□ -2.21
ZCCHC3Q9NUD5 RNU6-407P-201ENST00000365280 104 ntBASIC1.24□□□□□ -2.21
ZCCHC3Q9NUD5 RAB28P5-201ENST00000427490 651 ntBASIC1.24□□□□□ -2.21
ZCCHC3Q9NUD5 STAG3L5P-204ENST00000443759 179 ntBASIC1.24□□□□□ -2.21
ZCCHC3Q9NUD5 RNU1-123P-201ENST00000458950 160 ntBASIC1.24□□□□□ -2.21
ZCCHC3Q9NUD5 MIR2053-201ENST00000459295 91 ntBASIC1.24□□□□□ -2.21
ZCCHC3Q9NUD5 AC080078.3-201ENST00000605407 463 ntBASIC1.24□□□□□ -2.21
ZCCHC3Q9NUD5 AC016727.1-205ENST00000605437 569 ntBASIC1.24□□□□□ -2.21
ZCCHC3Q9NUD5 SNORD3E-202ENST00000627253 216 ntBASIC1.24□□□□□ -2.21
ZCCHC3Q9NUD5 RNU6-1301P-201ENST00000362724 104 ntBASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 RNU6-454P-201ENST00000364292 107 ntBASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 Y_RNA.577-201ENST00000384794 101 ntBASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 MIR562-201ENST00000384894 95 ntBASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 AC114482.1-201ENST00000418010 247 ntBASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 SUMO1P2-201ENST00000452524 304 ntBASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 AC091021.1-201ENST00000468051 388 ntBASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 AC092991.1-201ENST00000477176 376 ntBASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 AC108210.2-201ENST00000503681 201 ntBASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 RN7SKP88-201ENST00000516847 250 ntBASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 AC091178.2-201ENST00000584401 117 ntBASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 7SK.8-201ENST00000612110 250 ntBASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 7SK.11-201ENST00000615477 250 ntBASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 MIR8065-201ENST00000620577 100 ntBASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 7SK.13-201ENST00000622040 250 ntBASIC1.23□□□□□ -2.21
ZCCHC3Q9NUD5 RNU6-1188P-201ENST00000363795 107 ntBASIC1.22□□□□□ -2.21
ZCCHC3Q9NUD5 RNU6-505P-201ENST00000384427 107 ntBASIC1.22□□□□□ -2.21
ZCCHC3Q9NUD5 MIR873-201ENST00000401120 77 ntBASIC1.22□□□□□ -2.21
ZCCHC3Q9NUD5 SNORD12B-201ENST00000410433 91 ntBASIC1.22□□□□□ -2.21
ZCCHC3Q9NUD5 RNA5SP475-201ENST00000410568 110 ntBASIC1.22□□□□□ -2.21
ZCCHC3Q9NUD5 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.22□□□□□ -2.21
ZCCHC3Q9NUD5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.22□□□□□ -2.21
ZCCHC3Q9NUD5 AL137792.2-201ENST00000443484 235 ntBASIC1.22□□□□□ -2.21
ZCCHC3Q9NUD5 snoU13.23-201ENST00000458863 104 ntBASIC1.22□□□□□ -2.21
ZCCHC3Q9NUD5 RNU6-341P-201ENST00000516973 96 ntBASIC1.22□□□□□ -2.21
ZCCHC3Q9NUD5 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.22□□□□□ -2.21
ZCCHC3Q9NUD5 AP003033.1-201ENST00000527244 415 ntBASIC1.22□□□□□ -2.21
ZCCHC3Q9NUD5 DNAJC19P9-201ENST00000555084 351 ntBASIC1.22□□□□□ -2.21
ZCCHC3Q9NUD5 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
ZCCHC3Q9NUD5 MIR7843-201ENST00000622274 79 ntBASIC1.22□□□□□ -2.21
ZCCHC3Q9NUD5 AL359757.2-201ENST00000624309 274 ntBASIC1.22□□□□□ -2.21
ZCCHC3Q9NUD5 RNA5SP327-201ENST00000362494 101 ntBASIC1.21□□□□□ -2.22
ZCCHC3Q9NUD5 Y_RNA.265-201ENST00000364677 108 ntBASIC1.21□□□□□ -2.22
ZCCHC3Q9NUD5 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
ZCCHC3Q9NUD5 RNU6-310P-201ENST00000384655 107 ntBASIC1.21□□□□□ -2.22
ZCCHC3Q9NUD5 RNU6-376P-201ENST00000384731 106 ntBASIC1.21□□□□□ -2.22
ZCCHC3Q9NUD5 SNORA17.3-201ENST00000391159 129 ntBASIC1.21□□□□□ -2.22
ZCCHC3Q9NUD5 SNORA75.6-201ENST00000391318 127 ntBASIC1.21□□□□□ -2.22
ZCCHC3Q9NUD5 Y_RNA.646-201ENST00000410980 101 ntBASIC1.21□□□□□ -2.22
ZCCHC3Q9NUD5 RNU6-370P-201ENST00000411008 104 ntBASIC1.21□□□□□ -2.22
ZCCHC3Q9NUD5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.21□□□□□ -2.22
ZCCHC3Q9NUD5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.21□□□□□ -2.22
ZCCHC3Q9NUD5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.21□□□□□ -2.22
ZCCHC3Q9NUD5 RNU6-120P-201ENST00000516077 103 ntBASIC1.21□□□□□ -2.22
ZCCHC3Q9NUD5 RNU7-28P-201ENST00000516759 62 ntBASIC1.21□□□□□ -2.22
ZCCHC3Q9NUD5 AC019288.1-201ENST00000557918 224 ntBASIC1.21□□□□□ -2.22
ZCCHC3Q9NUD5 AL512598.1-201ENST00000610158 273 ntBASIC1.21□□□□□ -2.22
ZCCHC3Q9NUD5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
ZCCHC3Q9NUD5 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 SNORD114-7-201ENST00000362520 77 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 SNORA1B-201ENST00000362535 133 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 Y_RNA.243-201ENST00000364481 109 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 RNU6-117P-201ENST00000365415 107 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms