Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MIR1185-2-201ENST00000408687 86 ntBASIC1.09□□□□□ -2.23
TM9SF3Q9HD45 RNU7-87P-201ENST00000459343 62 ntBASIC1.09□□□□□ -2.23
TM9SF3Q9HD45 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.09□□□□□ -2.23
TM9SF3Q9HD45 RPS23P4-201ENST00000487908 423 ntBASIC1.09□□□□□ -2.23
TM9SF3Q9HD45 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.09□□□□□ -2.23
TM9SF3Q9HD45 UBL5P1-201ENST00000507979 193 ntBASIC1.09□□□□□ -2.23
TM9SF3Q9HD45 RNU6-1213P-201ENST00000517075 94 ntBASIC1.09□□□□□ -2.23
TM9SF3Q9HD45 CYCSP23-201ENST00000519781 313 ntBASIC1.09□□□□□ -2.23
TM9SF3Q9HD45 AC024995.1-201ENST00000523014 93 ntBASIC1.09□□□□□ -2.23
TM9SF3Q9HD45 AF235103.2-201ENST00000525753 346 ntBASIC1.09□□□□□ -2.23
TM9SF3Q9HD45 AC023157.2-201ENST00000540596 141 ntBASIC1.09□□□□□ -2.23
TM9SF3Q9HD45 AC093023.1-201ENST00000547375 507 ntBASIC1.09□□□□□ -2.23
TM9SF3Q9HD45 AC125232.2-201ENST00000592457 143 ntBASIC1.09□□□□□ -2.23
TM9SF3Q9HD45 AC010999.1-201ENST00000611856 324 ntBASIC1.09□□□□□ -2.23
TM9SF3Q9HD45 MIR6788-201ENST00000618842 66 ntBASIC1.09□□□□□ -2.23
TM9SF3Q9HD45 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.09□□□□□ -2.23
TM9SF3Q9HD45 MTND5P16-201ENST00000460269 1703 ntBASIC1.09□□□□□ -2.24
TM9SF3Q9HD45 RNA5SP361-201ENST00000362686 118 ntBASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 RNU1-124P-201ENST00000363861 145 ntBASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 Y_RNA.404-201ENST00000383978 102 ntBASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 SNORA12.1-201ENST00000390873 148 ntBASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 RNU6-1304P-201ENST00000411374 106 ntBASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 USP9YP16-201ENST00000430287 407 ntBASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 MTND4P18-201ENST00000447010 465 ntBASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 MTND3P10-201ENST00000450967 341 ntBASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 USP9YP23-201ENST00000455085 407 ntBASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 MTND4P17-201ENST00000470444 350 ntBASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 AC018710.1-201ENST00000506509 158 ntBASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 RNU6-120P-201ENST00000516077 103 ntBASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 RNU6-113P-201ENST00000516653 101 ntBASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 Y_RNA.706-201ENST00000516933 99 ntBASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 AC136932.1-201ENST00000574771 208 ntBASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 MIR151B-201ENST00000584249 96 ntBASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 AL022345.2-201ENST00000606307 135 ntBASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 AC009229.3-201ENST00000608056 282 ntBASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TM9SF3Q9HD45 U3.8-201ENST00000363675 217 ntBASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 RNU6-596P-201ENST00000365395 98 ntBASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 RNU6-281P-201ENST00000384212 103 ntBASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 MIR548K-201ENST00000408406 116 ntBASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 MIR548J-201ENST00000408833 112 ntBASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 RNU6-1050P-201ENST00000410388 107 ntBASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 MTND3P8-201ENST00000412909 339 ntBASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 AL139396.1-201ENST00000421137 167 ntBASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 AC093303.1-201ENST00000514549 295 ntBASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 SNORD116-28-201ENST00000516123 91 ntBASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 RNU1-142P-201ENST00000516682 145 ntBASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 RNU6-1016P-201ENST00000516689 94 ntBASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 RNU6-1198P-201ENST00000516904 67 ntBASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 SUMO2P16-201ENST00000519475 264 ntBASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 7SK.7-201ENST00000603504 247 ntBASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 AC021506.2-201ENST00000612354 169 ntBASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 AC027335.2-201ENST00000624030 375 ntBASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 AC018630.2-201ENST00000534866 2403 ntBASIC1.07□□□□□ -2.24
TM9SF3Q9HD45 RNU6-280P-201ENST00000364145 104 ntBASIC1.06□□□□□ -2.24
TM9SF3Q9HD45 Y_RNA.354-201ENST00000365448 111 ntBASIC1.06□□□□□ -2.24
TM9SF3Q9HD45 RNU6-601P-201ENST00000384540 107 ntBASIC1.06□□□□□ -2.24
TM9SF3Q9HD45 RNU4-14P-201ENST00000410858 122 ntBASIC1.06□□□□□ -2.24
TM9SF3Q9HD45 FCF1P9-201ENST00000412546 282 ntBASIC1.06□□□□□ -2.24
TM9SF3Q9HD45 AC008134.1-201ENST00000420943 193 ntBASIC1.06□□□□□ -2.24
TM9SF3Q9HD45 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.06□□□□□ -2.24
TM9SF3Q9HD45 SNORD65B-201ENST00000459126 73 ntBASIC1.06□□□□□ -2.24
TM9SF3Q9HD45 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.06□□□□□ -2.24
TM9SF3Q9HD45 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.06□□□□□ -2.24
TM9SF3Q9HD45 RNU6-1114P-201ENST00000516022 107 ntBASIC1.06□□□□□ -2.24
TM9SF3Q9HD45 RNU6-1223P-201ENST00000517124 104 ntBASIC1.06□□□□□ -2.24
TM9SF3Q9HD45 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.06□□□□□ -2.24
TM9SF3Q9HD45 AC060780.3-201ENST00000589464 80 ntBASIC1.06□□□□□ -2.24
TM9SF3Q9HD45 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
TM9SF3Q9HD45 AL359075.3-201ENST00000613288 217 ntBASIC1.06□□□□□ -2.24
TM9SF3Q9HD45 MIR6515-201ENST00000619843 57 ntBASIC1.06□□□□□ -2.24
TM9SF3Q9HD45 Y_RNA.112-201ENST00000363250 102 ntBASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 Y_RNA.339-201ENST00000365325 102 ntBASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 Y_RNA.540-201ENST00000384638 111 ntBASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 USMG5P1-201ENST00000425964 177 ntBASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 AC245047.3-201ENST00000429428 127 ntBASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 DYNLT3P2-201ENST00000442517 295 ntBASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 Y_RNA.683-201ENST00000516508 93 ntBASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 SCARNA16.2-201ENST00000516520 172 ntBASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 RNU6-358P-201ENST00000516564 75 ntBASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 RNU7-30P-201ENST00000516835 62 ntBASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 MIR5701-3-201ENST00000578890 82 ntBASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 MIR4661-201ENST00000582720 75 ntBASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 MIR5701-1-201ENST00000585138 82 ntBASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 AC100812.1-201ENST00000607622 580 ntBASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 MIR5701-2-201ENST00000615634 82 ntBASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 MIR8054-201ENST00000620877 86 ntBASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 AC068647.2-201ENST00000637380 353 ntBASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
TM9SF3Q9HD45 Y_RNA.88-201ENST00000363029 99 ntBASIC1.04□□□□□ -2.24
TM9SF3Q9HD45 RNY1P16-201ENST00000363063 111 ntBASIC1.04□□□□□ -2.24
TM9SF3Q9HD45 RNU6-137P-201ENST00000363680 108 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms