Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 MTCO1P5-201ENST00000433573 344 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 POLR2KP2-201ENST00000438155 177 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 RNU6-498P-201ENST00000459468 107 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 AC114982.1-201ENST00000469402 321 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 AC079804.2-201ENST00000490376 200 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.673-201ENST00000516306 88 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 RNU6-948P-201ENST00000516374 107 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 AC087441.2-201ENST00000529141 262 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 CYCSP26-201ENST00000534107 320 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.36□□□□□ -2.03
USP29Q9HBJ7 MIR4769-201ENST00000584126 77 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.36□□□□□ -2.03
USP29Q9HBJ7 MIR6766-201ENST00000622641 72 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.36□□□□□ -2.03
USP29Q9HBJ7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USP29Q9HBJ7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USP29Q9HBJ7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
USP29Q9HBJ7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USP29Q9HBJ7 AC009487.4-201ENST00000624969 3585 ntBASIC2.35□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.489-201ENST00000384410 101 ntBASIC2.35□□□□□ -2.03
USP29Q9HBJ7 SNORA53-201ENST00000391141 249 ntBASIC2.35□□□□□ -2.03
USP29Q9HBJ7 MIR548H3-201ENST00000408771 118 ntBASIC2.35□□□□□ -2.03
USP29Q9HBJ7 AC009238.1-201ENST00000442165 424 ntBASIC2.35□□□□□ -2.03
USP29Q9HBJ7 AC009237.6-201ENST00000446969 424 ntBASIC2.35□□□□□ -2.03
USP29Q9HBJ7 PRELID3BP1-201ENST00000457142 540 ntBASIC2.35□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.638-201ENST00000459374 113 ntBASIC2.35□□□□□ -2.03
USP29Q9HBJ7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.35□□□□□ -2.03
USP29Q9HBJ7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.35□□□□□ -2.03
USP29Q9HBJ7 MIR4643-201ENST00000577473 78 ntBASIC2.35□□□□□ -2.03
USP29Q9HBJ7 AC006380.1-201ENST00000603598 186 ntBASIC2.35□□□□□ -2.03
USP29Q9HBJ7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.35□□□□□ -2.03
USP29Q9HBJ7 U2.14-201ENST00000615943 113 ntBASIC2.35□□□□□ -2.03
USP29Q9HBJ7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.35□□□□□ -2.03
USP29Q9HBJ7 SNORA67.1-201ENST00000364749 141 ntBASIC2.34□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.329-201ENST00000365209 107 ntBASIC2.34□□□□□ -2.03
USP29Q9HBJ7 RNU1-52P-201ENST00000384190 164 ntBASIC2.34□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.478-201ENST00000384358 107 ntBASIC2.34□□□□□ -2.03
USP29Q9HBJ7 SNORD14D-201ENST00000384390 87 ntBASIC2.34□□□□□ -2.03
USP29Q9HBJ7 RNU6-57P-201ENST00000411348 103 ntBASIC2.34□□□□□ -2.03
USP29Q9HBJ7 AC016909.1-201ENST00000415916 166 ntBASIC2.34□□□□□ -2.03
USP29Q9HBJ7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.34□□□□□ -2.03
USP29Q9HBJ7 AC025647.1-201ENST00000517879 253 ntBASIC2.34□□□□□ -2.03
USP29Q9HBJ7 MIR3145-201ENST00000580727 82 ntBASIC2.34□□□□□ -2.03
USP29Q9HBJ7 DEFB117-201ENST00000602356 141 ntBASIC2.34□□□□□ -2.03
USP29Q9HBJ7 AC025754.2-201ENST00000606491 432 ntBASIC2.34□□□□□ -2.03
USP29Q9HBJ7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.34□□□□□ -2.03
USP29Q9HBJ7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USP29Q9HBJ7 UBE2WP1-201ENST00000362030 340 ntBASIC2.33□□□□□ -2.04
USP29Q9HBJ7 RNU6-1266P-201ENST00000362794 105 ntBASIC2.33□□□□□ -2.04
USP29Q9HBJ7 RNU1-148P-201ENST00000384472 162 ntBASIC2.33□□□□□ -2.04
USP29Q9HBJ7 AL031003.1-201ENST00000404229 172 ntBASIC2.33□□□□□ -2.04
USP29Q9HBJ7 AL355796.1-201ENST00000406706 323 ntBASIC2.33□□□□□ -2.04
USP29Q9HBJ7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.33□□□□□ -2.04
USP29Q9HBJ7 SRIP3-201ENST00000413200 219 ntBASIC2.33□□□□□ -2.04
USP29Q9HBJ7 AC108059.2-201ENST00000434626 151 ntBASIC2.33□□□□□ -2.04
USP29Q9HBJ7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USP29Q9HBJ7 AC074290.1-201ENST00000448883 135 ntBASIC2.33□□□□□ -2.04
USP29Q9HBJ7 AC104435.1-201ENST00000483483 166 ntBASIC2.33□□□□□ -2.04
USP29Q9HBJ7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.33□□□□□ -2.04
USP29Q9HBJ7 RNU2-34P-201ENST00000516534 121 ntBASIC2.33□□□□□ -2.04
USP29Q9HBJ7 RNU6-388P-201ENST00000517012 105 ntBASIC2.33□□□□□ -2.04
USP29Q9HBJ7 RNU6-389P-201ENST00000517048 105 ntBASIC2.33□□□□□ -2.04
USP29Q9HBJ7 RNU6-794P-201ENST00000517261 64 ntBASIC2.33□□□□□ -2.04
USP29Q9HBJ7 RPL21P9-201ENST00000556149 474 ntBASIC2.33□□□□□ -2.04
USP29Q9HBJ7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.33□□□□□ -2.04
USP29Q9HBJ7 AC005357.1-201ENST00000588399 301 ntBASIC2.33□□□□□ -2.04
USP29Q9HBJ7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.33□□□□□ -2.04
USP29Q9HBJ7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.33□□□□□ -2.04
USP29Q9HBJ7 RNU4-80P-201ENST00000363200 141 ntBASIC2.32□□□□□ -2.04
USP29Q9HBJ7 SNORA20.1-201ENST00000364790 130 ntBASIC2.32□□□□□ -2.04
USP29Q9HBJ7 RNU6-1318P-201ENST00000365389 103 ntBASIC2.32□□□□□ -2.04
USP29Q9HBJ7 MIR1262-201ENST00000408276 93 ntBASIC2.32□□□□□ -2.04
USP29Q9HBJ7 RNU2-61P-201ENST00000411069 191 ntBASIC2.32□□□□□ -2.04
USP29Q9HBJ7 AL357134.1-201ENST00000445848 426 ntBASIC2.32□□□□□ -2.04
USP29Q9HBJ7 SNORD65B-201ENST00000459126 73 ntBASIC2.32□□□□□ -2.04
USP29Q9HBJ7 AC091959.1-201ENST00000495857 238 ntBASIC2.32□□□□□ -2.04
USP29Q9HBJ7 RNU6-191P-201ENST00000516295 94 ntBASIC2.32□□□□□ -2.04
USP29Q9HBJ7 RNA5SP281-201ENST00000516504 135 ntBASIC2.32□□□□□ -2.04
USP29Q9HBJ7 RNU6-111P-201ENST00000517179 105 ntBASIC2.32□□□□□ -2.04
USP29Q9HBJ7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.32□□□□□ -2.04
USP29Q9HBJ7 MIR6895-201ENST00000613497 78 ntBASIC2.32□□□□□ -2.04
USP29Q9HBJ7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.32□□□□□ -2.04
USP29Q9HBJ7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
USP29Q9HBJ7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.31□□□□□ -2.04
USP29Q9HBJ7 Y_RNA.44-201ENST00000362676 108 ntBASIC2.31□□□□□ -2.04
USP29Q9HBJ7 RNU1-91P-201ENST00000364746 163 ntBASIC2.31□□□□□ -2.04
USP29Q9HBJ7 Y_RNA.277-201ENST00000364754 102 ntBASIC2.31□□□□□ -2.04
USP29Q9HBJ7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.31□□□□□ -2.04
USP29Q9HBJ7 SNORA4.4-201ENST00000515921 135 ntBASIC2.31□□□□□ -2.04
USP29Q9HBJ7 SNORA27.4-201ENST00000516650 95 ntBASIC2.31□□□□□ -2.04
USP29Q9HBJ7 RNU6-856P-201ENST00000516959 98 ntBASIC2.31□□□□□ -2.04
USP29Q9HBJ7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.31□□□□□ -2.04
USP29Q9HBJ7 MIR3684-201ENST00000579779 74 ntBASIC2.31□□□□□ -2.04
USP29Q9HBJ7 AC090425.1-201ENST00000610007 140 ntBASIC2.31□□□□□ -2.04
USP29Q9HBJ7 AC078938.1-201ENST00000620993 318 ntBASIC2.31□□□□□ -2.04
USP29Q9HBJ7 AP000553.5-201ENST00000641933 54 ntBASIC2.31□□□□□ -2.04
USP29Q9HBJ7 SNORA25.1-201ENST00000362326 128 ntBASIC2.3□□□□□ -2.04
USP29Q9HBJ7 SNORD114-7-201ENST00000362520 77 ntBASIC2.3□□□□□ -2.04
USP29Q9HBJ7 SNORD27-201ENST00000363981 72 ntBASIC2.3□□□□□ -2.04
USP29Q9HBJ7 Y_RNA.275-201ENST00000364726 110 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 258.4 ms