Protein–RNA interactions for Protein: Q9H9J4

USP42, Ubiquitin carboxyl-terminal hydrolase 42, humanhuman

Known RBP Predictions only

Length 1,324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP42Q9H9J4 OR9P1P-201ENST00000496431 281 ntBASIC0.47□□□□□ -2.33
USP42Q9H9J4 AC027419.1-201ENST00000522976 328 ntBASIC0.47□□□□□ -2.33
USP42Q9H9J4 AC104383.1-201ENST00000530297 370 ntBASIC0.47□□□□□ -2.33
USP42Q9H9J4 AP002001.1-203ENST00000534002 267 ntBASIC0.47□□□□□ -2.33
USP42Q9H9J4 AC023157.2-201ENST00000540596 141 ntBASIC0.47□□□□□ -2.33
USP42Q9H9J4 UBL5P4-201ENST00000562584 236 ntBASIC0.47□□□□□ -2.33
USP42Q9H9J4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.47□□□□□ -2.33
USP42Q9H9J4 MIR4438-201ENST00000585271 93 ntBASIC0.47□□□□□ -2.33
USP42Q9H9J4 SNORA28-201ENST00000606769 126 ntBASIC0.47□□□□□ -2.33
USP42Q9H9J4 CASC19-280ENST00000642102 1351 ntBASIC0.46□□□□□ -2.34
USP42Q9H9J4 Y_RNA.151-201ENST00000363566 112 ntBASIC0.46□□□□□ -2.34
USP42Q9H9J4 Y_RNA.265-201ENST00000364677 108 ntBASIC0.46□□□□□ -2.34
USP42Q9H9J4 Y_RNA.409-201ENST00000383990 98 ntBASIC0.46□□□□□ -2.34
USP42Q9H9J4 RNU6-214P-201ENST00000384130 107 ntBASIC0.46□□□□□ -2.34
USP42Q9H9J4 EIF4E2P1-201ENST00000393781 255 ntBASIC0.46□□□□□ -2.34
USP42Q9H9J4 LINC01399-202ENST00000458450 244 ntBASIC0.46□□□□□ -2.34
USP42Q9H9J4 AC083798.1-201ENST00000472671 131 ntBASIC0.46□□□□□ -2.34
USP42Q9H9J4 AC083904.1-201ENST00000487828 231 ntBASIC0.46□□□□□ -2.34
USP42Q9H9J4 SNORA62.5-201ENST00000516634 120 ntBASIC0.46□□□□□ -2.34
USP42Q9H9J4 Y_RNA.695-201ENST00000516715 107 ntBASIC0.46□□□□□ -2.34
USP42Q9H9J4 AL117336.2-201ENST00000602435 335 ntBASIC0.46□□□□□ -2.34
USP42Q9H9J4 AC073648.5-201ENST00000603502 305 ntBASIC0.46□□□□□ -2.34
USP42Q9H9J4 Z83818.1-201ENST00000603584 150 ntBASIC0.46□□□□□ -2.34
USP42Q9H9J4 AL096861.1-201ENST00000610899 123 ntBASIC0.46□□□□□ -2.34
USP42Q9H9J4 AL158063.1-201ENST00000615349 536 ntBASIC0.46□□□□□ -2.34
USP42Q9H9J4 AC009248.2-201ENST00000619826 254 ntBASIC0.46□□□□□ -2.34
USP42Q9H9J4 AC073534.2-201ENST00000620377 381 ntBASIC0.46□□□□□ -2.34
USP42Q9H9J4 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.46□□□□□ -2.34
USP42Q9H9J4 AC005592.1-201ENST00000566527 1640 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 RNU6-1266P-201ENST00000362794 105 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 SNORD115-32-201ENST00000364079 82 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 Y_RNA.319-201ENST00000365138 92 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 RNU6-1335P-201ENST00000365426 107 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 SNORA2.2-201ENST00000365473 135 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 SNORA69-201ENST00000383895 132 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
USP42Q9H9J4 RNA5SP63-201ENST00000391225 112 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 SNORD99-201ENST00000408612 74 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 RNU6-648P-201ENST00000410190 107 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 RNU4-55P-201ENST00000410731 137 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 AC092423.1-201ENST00000430165 186 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 AC104332.1-201ENST00000440471 797 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.45□□□□□ -2.34
USP42Q9H9J4 MTND4P18-201ENST00000447010 465 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 MRPS10P1-201ENST00000448483 130 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 AL049830.1-201ENST00000468034 425 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 RPS3AP17-201ENST00000472594 777 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 RPL30P10-201ENST00000488148 337 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 RNU6-835P-201ENST00000516974 104 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 AC091144.1-201ENST00000519573 138 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.45□□□□□ -2.34
USP42Q9H9J4 AC026371.1-201ENST00000551867 419 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 AC006504.8-201ENST00000621046 635 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 MIR6079-201ENST00000635807 62 ntBASIC0.45□□□□□ -2.34
USP42Q9H9J4 MIRLET7C-201ENST00000362160 84 ntBASIC0.44□□□□□ -2.34
USP42Q9H9J4 Y_RNA.296-201ENST00000364930 108 ntBASIC0.44□□□□□ -2.34
USP42Q9H9J4 RNU4-9P-201ENST00000364951 139 ntBASIC0.44□□□□□ -2.34
USP42Q9H9J4 Y_RNA.372-201ENST00000365599 102 ntBASIC0.44□□□□□ -2.34
USP42Q9H9J4 RNU6-933P-201ENST00000384424 107 ntBASIC0.44□□□□□ -2.34
USP42Q9H9J4 SNORD89-201ENST00000390981 114 ntBASIC0.44□□□□□ -2.34
USP42Q9H9J4 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.44□□□□□ -2.34
USP42Q9H9J4 MTND1P11-201ENST00000456661 876 ntBASIC0.44□□□□□ -2.34
USP42Q9H9J4 AC010469.2-201ENST00000496412 480 ntBASIC0.44□□□□□ -2.34
USP42Q9H9J4 AC107401.1-201ENST00000503426 685 ntBASIC0.44□□□□□ -2.34
USP42Q9H9J4 MTCO2P30-201ENST00000503662 364 ntBASIC0.44□□□□□ -2.34
USP42Q9H9J4 AC022493.2-201ENST00000506122 481 ntBASIC0.44□□□□□ -2.34
USP42Q9H9J4 AC091885.1-201ENST00000506658 268 ntBASIC0.44□□□□□ -2.34
USP42Q9H9J4 RNU7-12P-201ENST00000516030 62 ntBASIC0.44□□□□□ -2.34
USP42Q9H9J4 Y_RNA.717-201ENST00000517106 92 ntBASIC0.44□□□□□ -2.34
USP42Q9H9J4 AC145350.1-201ENST00000567426 208 ntBASIC0.44□□□□□ -2.34
USP42Q9H9J4 AC119751.7-201ENST00000600494 245 ntBASIC0.44□□□□□ -2.34
USP42Q9H9J4 7SK.10-201ENST00000621414 298 ntBASIC0.44□□□□□ -2.34
USP42Q9H9J4 RNU6-254P-201ENST00000363377 107 ntBASIC0.43□□□□□ -2.34
USP42Q9H9J4 RNU4-67P-201ENST00000364569 141 ntBASIC0.43□□□□□ -2.34
USP42Q9H9J4 MIR526A1-201ENST00000384897 85 ntBASIC0.43□□□□□ -2.34
USP42Q9H9J4 RNU6-159P-201ENST00000391080 106 ntBASIC0.43□□□□□ -2.34
USP42Q9H9J4 RPL30P16-201ENST00000419341 429 ntBASIC0.43□□□□□ -2.34
USP42Q9H9J4 AL590632.1-201ENST00000424289 371 ntBASIC0.43□□□□□ -2.34
USP42Q9H9J4 MTCO1P19-201ENST00000443487 500 ntBASIC0.43□□□□□ -2.34
USP42Q9H9J4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.43□□□□□ -2.34
USP42Q9H9J4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.43□□□□□ -2.34
USP42Q9H9J4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.43□□□□□ -2.34
USP42Q9H9J4 AC097462.1-201ENST00000514125 324 ntBASIC0.43□□□□□ -2.34
USP42Q9H9J4 AC036111.3-201ENST00000526389 112 ntBASIC0.43□□□□□ -2.34
USP42Q9H9J4 AC091178.2-201ENST00000584401 117 ntBASIC0.43□□□□□ -2.34
USP42Q9H9J4 MIR3192-201ENST00000584920 77 ntBASIC0.43□□□□□ -2.34
USP42Q9H9J4 AC004832.4-201ENST00000608952 331 ntBASIC0.43□□□□□ -2.34
USP42Q9H9J4 SNORA1B-201ENST00000362535 133 ntBASIC0.42□□□□□ -2.34
USP42Q9H9J4 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
USP42Q9H9J4 RNU6-793P-201ENST00000384233 104 ntBASIC0.42□□□□□ -2.34
USP42Q9H9J4 RNU6-95P-201ENST00000384697 107 ntBASIC0.42□□□□□ -2.34
USP42Q9H9J4 MIR153-2-201ENST00000385225 87 ntBASIC0.42□□□□□ -2.34
USP42Q9H9J4 CALM2P3-201ENST00000400429 449 ntBASIC0.42□□□□□ -2.34
USP42Q9H9J4 AL353572.1-201ENST00000442490 417 ntBASIC0.42□□□□□ -2.34
USP42Q9H9J4 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.42□□□□□ -2.34
USP42Q9H9J4 AC233266.1-201ENST00000454518 96 ntBASIC0.42□□□□□ -2.34
USP42Q9H9J4 RNU6-956P-201ENST00000458868 103 ntBASIC0.42□□□□□ -2.34
USP42Q9H9J4 AC091021.1-201ENST00000468051 388 ntBASIC0.42□□□□□ -2.34
USP42Q9H9J4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms