Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 AC006504.1-201ENST00000562493 3666 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 AC015813.6-201ENST00000624409 5808 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 AC007656.2-201ENST00000624902 4547 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 MFSD8-242ENST00000641690 4199 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORA60-201ENST00000362396 134 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORD56.1-201ENST00000362913 68 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORD46.1-201ENST00000364139 104 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 Y_RNA.207-201ENST00000364142 106 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-865P-201ENST00000364772 107 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORA32-201ENST00000384072 121 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORD38.2-201ENST00000384470 69 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR200C-201ENST00000384980 68 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 RNA5SP323-201ENST00000391094 133 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 U3.37-201ENST00000408528 213 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR1185-2-201ENST00000408687 86 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORA57.3-201ENST00000411095 141 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 AC019205.3-201ENST00000424573 156 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU7-119P-201ENST00000459279 63 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 AC005908.1-201ENST00000468701 347 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 AC023790.1-201ENST00000482174 347 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-75P-201ENST00000515944 104 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 RNA5SP20-201ENST00000515976 84 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU7-25P-201ENST00000516544 62 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-572P-201ENST00000516724 80 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-826P-201ENST00000516827 104 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-958P-201ENST00000516995 106 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 AC011604.1-201ENST00000545978 196 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 MTND5P40-201ENST00000559945 246 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR548AL-201ENST00000578416 97 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR4536-1-201ENST00000583537 88 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 AC019159.1-201ENST00000605094 187 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORA62.6-201ENST00000606322 83 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 U6.81-201ENST00000612550 106 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 AC005562.2-201ENST00000618264 111 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 AC022149.2-201ENST00000621061 203 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 AC034229.5-201ENST00000624258 185 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR3529-201ENST00000637713 78 ntBASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
KRTAP4-3Q9BYR4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR342-201ENST00000362212 99 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORA22.1-201ENST00000362701 134 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 Y_RNA.253-201ENST00000364562 112 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 RNY1P2-201ENST00000364820 117 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 RNA5SP97-201ENST00000365006 84 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 Y_RNA.448-201ENST00000384185 108 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 RNVU1-14-201ENST00000384770 164 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 EI24P2-201ENST00000397776 1076 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORA11.1-201ENST00000408133 129 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORA3.3-201ENST00000408712 125 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 RN7SKP220-201ENST00000410611 288 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 RNA5SP31-201ENST00000411144 127 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 RPS29P4-201ENST00000414733 161 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 CRYBB2P1-203ENST00000415709 538 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 CST9LP2-201ENST00000437612 320 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 AC083863.1-201ENST00000438811 231 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 AC008155.2-201ENST00000464337 397 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 AC090525.1-201ENST00000479116 478 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 AC025518.1-201ENST00000479856 347 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 TRBV12-2-201ENST00000489763 344 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-998P-201ENST00000515894 101 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms