Protein–RNA interactions for Protein: Q9BXW4

MAP1LC3C, Microtubule-associated proteins 1A/1B light chain 3C, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3CQ9BXW4 AC127459.3-201ENST00000624328 466 ntBASIC0.29□□□□□ -2.36
MAP1LC3CQ9BXW4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
MAP1LC3CQ9BXW4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 MIR373-201ENST00000362273 69 ntBASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 SNORA25.3-201ENST00000363205 127 ntBASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 RNA5SP99-201ENST00000364020 114 ntBASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 RNU6-522P-201ENST00000364497 107 ntBASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 SNORD14.1-201ENST00000365609 90 ntBASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 RNU6-1105P-201ENST00000384774 107 ntBASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 MIR517A-201ENST00000385001 87 ntBASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 SNORD105-201ENST00000386910 85 ntBASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 PIGPP3-201ENST00000425307 415 ntBASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 PCNPP5-201ENST00000452246 481 ntBASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 AC083904.1-201ENST00000487828 231 ntBASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 AF235103.2-201ENST00000525753 346 ntBASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 AC011604.1-201ENST00000545978 196 ntBASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 MIR3908-201ENST00000579798 126 ntBASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 AC073114.1-201ENST00000612027 490 ntBASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.28□□□□□ -2.36
MAP1LC3CQ9BXW4 RNU6-392P-201ENST00000364926 101 ntBASIC0.27□□□□□ -2.37
MAP1LC3CQ9BXW4 RNU6-95P-201ENST00000384697 107 ntBASIC0.27□□□□□ -2.37
MAP1LC3CQ9BXW4 MIR1827-201ENST00000408549 66 ntBASIC0.27□□□□□ -2.37
MAP1LC3CQ9BXW4 AC243428.1-201ENST00000421099 264 ntBASIC0.27□□□□□ -2.37
MAP1LC3CQ9BXW4 USMG5P1-201ENST00000425964 177 ntBASIC0.27□□□□□ -2.37
MAP1LC3CQ9BXW4 MTCO2P12-201ENST00000427426 682 ntBASIC0.27□□□□□ -2.37
MAP1LC3CQ9BXW4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.27□□□□□ -2.37
MAP1LC3CQ9BXW4 SUMO1P2-201ENST00000452524 304 ntBASIC0.27□□□□□ -2.37
MAP1LC3CQ9BXW4 RNU6-956P-201ENST00000458868 103 ntBASIC0.27□□□□□ -2.37
MAP1LC3CQ9BXW4 HMGN1P7-201ENST00000491722 313 ntBASIC0.27□□□□□ -2.37
MAP1LC3CQ9BXW4 RNU6-1114P-201ENST00000516022 107 ntBASIC0.27□□□□□ -2.37
MAP1LC3CQ9BXW4 RNU6-229P-201ENST00000516614 102 ntBASIC0.27□□□□□ -2.37
MAP1LC3CQ9BXW4 AC036111.3-201ENST00000526389 112 ntBASIC0.27□□□□□ -2.37
MAP1LC3CQ9BXW4 LRRC34P1-201ENST00000542742 915 ntBASIC0.27□□□□□ -2.37
MAP1LC3CQ9BXW4 AC015712.3-201ENST00000559380 164 ntBASIC0.27□□□□□ -2.37
MAP1LC3CQ9BXW4 MIR5696-201ENST00000578474 85 ntBASIC0.27□□□□□ -2.37
MAP1LC3CQ9BXW4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.27□□□□□ -2.37
MAP1LC3CQ9BXW4 AC134026.1-201ENST00000623249 2239 ntBASIC0.27□□□□□ -2.37
MAP1LC3CQ9BXW4 SNORD68-201ENST00000363214 84 ntBASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 SNORD113.3-201ENST00000364630 78 ntBASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 SNORA75-201ENST00000384158 137 ntBASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 MIR136-201ENST00000385207 82 ntBASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 MIR140-201ENST00000385282 100 ntBASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 MIR873-201ENST00000401120 77 ntBASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 MIR1298-201ENST00000408783 112 ntBASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 RNU6-648P-201ENST00000410190 107 ntBASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 MRPS18CP6-201ENST00000423587 223 ntBASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 ERLEC1P1-201ENST00000433806 578 ntBASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 AC114811.1-201ENST00000507207 168 ntBASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 RN7SKP164-201ENST00000516138 266 ntBASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 RNU7-43P-201ENST00000516554 64 ntBASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 AC023442.1-201ENST00000531247 422 ntBASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 RNU6-89P-201ENST00000606519 100 ntBASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 AC092954.2-201ENST00000609103 430 ntBASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 MIR5087-201ENST00000635826 76 ntBASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 MTND5P16-201ENST00000460269 1703 ntBASIC0.26□□□□□ -2.37
MAP1LC3CQ9BXW4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.25□□□□□ -2.37
MAP1LC3CQ9BXW4 RNA5SP347-201ENST00000362445 119 ntBASIC0.25□□□□□ -2.37
MAP1LC3CQ9BXW4 RNU6-342P-201ENST00000384521 104 ntBASIC0.25□□□□□ -2.37
MAP1LC3CQ9BXW4 RNU1-139P-201ENST00000391307 165 ntBASIC0.25□□□□□ -2.37
MAP1LC3CQ9BXW4 Y_RNA.595-201ENST00000410403 105 ntBASIC0.25□□□□□ -2.37
MAP1LC3CQ9BXW4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.25□□□□□ -2.37
MAP1LC3CQ9BXW4 AC002350.1-201ENST00000490759 375 ntBASIC0.25□□□□□ -2.37
MAP1LC3CQ9BXW4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.25□□□□□ -2.37
MAP1LC3CQ9BXW4 RNU7-41P-201ENST00000515917 61 ntBASIC0.25□□□□□ -2.37
MAP1LC3CQ9BXW4 RNU6-835P-201ENST00000516974 104 ntBASIC0.25□□□□□ -2.37
MAP1LC3CQ9BXW4 MIR4764-201ENST00000580680 88 ntBASIC0.25□□□□□ -2.37
MAP1LC3CQ9BXW4 MIR4300-201ENST00000581016 96 ntBASIC0.25□□□□□ -2.37
MAP1LC3CQ9BXW4 AP000942.3-201ENST00000603702 160 ntBASIC0.25□□□□□ -2.37
MAP1LC3CQ9BXW4 AC124303.1-201ENST00000605703 360 ntBASIC0.25□□□□□ -2.37
MAP1LC3CQ9BXW4 AC019193.3-201ENST00000609144 554 ntBASIC0.25□□□□□ -2.37
MAP1LC3CQ9BXW4 RNU6-117P-201ENST00000365415 107 ntBASIC0.24□□□□□ -2.37
MAP1LC3CQ9BXW4 RNU6-281P-201ENST00000384212 103 ntBASIC0.24□□□□□ -2.37
MAP1LC3CQ9BXW4 Y_RNA.490-201ENST00000384413 102 ntBASIC0.24□□□□□ -2.37
MAP1LC3CQ9BXW4 Y_RNA.582-201ENST00000391023 95 ntBASIC0.24□□□□□ -2.37
MAP1LC3CQ9BXW4 AC092447.3-201ENST00000426027 686 ntBASIC0.24□□□□□ -2.37
MAP1LC3CQ9BXW4 USP9YP16-201ENST00000430287 407 ntBASIC0.24□□□□□ -2.37
MAP1LC3CQ9BXW4 MTATP6P13-201ENST00000438531 667 ntBASIC0.24□□□□□ -2.37
MAP1LC3CQ9BXW4 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.24□□□□□ -2.37
MAP1LC3CQ9BXW4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.24□□□□□ -2.37
MAP1LC3CQ9BXW4 UQCRBP2-201ENST00000447827 297 ntBASIC0.24□□□□□ -2.37
MAP1LC3CQ9BXW4 USP9YP23-201ENST00000455085 407 ntBASIC0.24□□□□□ -2.37
MAP1LC3CQ9BXW4 MTND1P11-201ENST00000456661 876 ntBASIC0.24□□□□□ -2.37
MAP1LC3CQ9BXW4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.24□□□□□ -2.37
MAP1LC3CQ9BXW4 SNORA68.3-201ENST00000515906 83 ntBASIC0.24□□□□□ -2.37
MAP1LC3CQ9BXW4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.24□□□□□ -2.37
MAP1LC3CQ9BXW4 AC093027.1-201ENST00000546698 429 ntBASIC0.24□□□□□ -2.37
MAP1LC3CQ9BXW4 AC093023.1-201ENST00000547375 507 ntBASIC0.24□□□□□ -2.37
MAP1LC3CQ9BXW4 AL158211.1-201ENST00000566763 763 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms