Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RNU6-1117P-201ENST00000384525 104 ntBASIC2.73□□□□□ -1.97
SALL3Q9BXA9 RNU6-959P-201ENST00000384671 107 ntBASIC2.73□□□□□ -1.97
SALL3Q9BXA9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.73□□□□□ -1.97
SALL3Q9BXA9 AC024067.1-201ENST00000426199 223 ntBASIC2.73□□□□□ -1.97
SALL3Q9BXA9 AC108210.2-201ENST00000503681 201 ntBASIC2.73□□□□□ -1.97
SALL3Q9BXA9 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.73□□□□□ -1.97
SALL3Q9BXA9 RNU6-155P-201ENST00000516347 100 ntBASIC2.73□□□□□ -1.97
SALL3Q9BXA9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.73□□□□□ -1.97
SALL3Q9BXA9 RNU2-12P-201ENST00000517216 168 ntBASIC2.73□□□□□ -1.97
SALL3Q9BXA9 MIR4308-201ENST00000580634 81 ntBASIC2.73□□□□□ -1.97
SALL3Q9BXA9 AC006380.1-201ENST00000603598 186 ntBASIC2.73□□□□□ -1.97
SALL3Q9BXA9 uc_338.14-201ENST00000613162 166 ntBASIC2.73□□□□□ -1.97
SALL3Q9BXA9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SALL3Q9BXA9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SALL3Q9BXA9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.73□□□□□ -1.97
SALL3Q9BXA9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.72□□□□□ -1.97
SALL3Q9BXA9 RNU6-653P-201ENST00000363074 106 ntBASIC2.72□□□□□ -1.97
SALL3Q9BXA9 RNU4-80P-201ENST00000363200 141 ntBASIC2.72□□□□□ -1.97
SALL3Q9BXA9 Y_RNA.238-201ENST00000364441 102 ntBASIC2.72□□□□□ -1.97
SALL3Q9BXA9 SNORA68.1-201ENST00000364537 132 ntBASIC2.72□□□□□ -1.97
SALL3Q9BXA9 MIR221-201ENST00000385135 110 ntBASIC2.72□□□□□ -1.97
SALL3Q9BXA9 RNU6-1154P-201ENST00000391001 104 ntBASIC2.72□□□□□ -1.97
SALL3Q9BXA9 AC091021.1-201ENST00000468051 388 ntBASIC2.72□□□□□ -1.97
SALL3Q9BXA9 AC114982.1-201ENST00000469402 321 ntBASIC2.72□□□□□ -1.97
SALL3Q9BXA9 AC104435.1-201ENST00000483483 166 ntBASIC2.72□□□□□ -1.97
SALL3Q9BXA9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.72□□□□□ -1.97
SALL3Q9BXA9 AP002001.1-203ENST00000534002 267 ntBASIC2.72□□□□□ -1.97
SALL3Q9BXA9 MIR3144-201ENST00000579460 79 ntBASIC2.72□□□□□ -1.97
SALL3Q9BXA9 AC090616.3-201ENST00000582184 217 ntBASIC2.72□□□□□ -1.97
SALL3Q9BXA9 MIR3117-201ENST00000584034 78 ntBASIC2.72□□□□□ -1.97
SALL3Q9BXA9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.72□□□□□ -1.97
SALL3Q9BXA9 AL078604.3-201ENST00000615580 211 ntBASIC2.72□□□□□ -1.97
SALL3Q9BXA9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SALL3Q9BXA9 RNU6-1210P-201ENST00000363775 107 ntBASIC2.71□□□□□ -1.98
SALL3Q9BXA9 RNU1-109P-201ENST00000383960 147 ntBASIC2.71□□□□□ -1.98
SALL3Q9BXA9 MIR147B-201ENST00000390185 80 ntBASIC2.71□□□□□ -1.98
SALL3Q9BXA9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.71□□□□□ -1.98
SALL3Q9BXA9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.71□□□□□ -1.98
SALL3Q9BXA9 AL035461.1-201ENST00000421490 332 ntBASIC2.71□□□□□ -1.98
SALL3Q9BXA9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.71□□□□□ -1.98
SALL3Q9BXA9 AC140059.1-201ENST00000489238 361 ntBASIC2.71□□□□□ -1.98
SALL3Q9BXA9 RNU6-436P-201ENST00000516171 114 ntBASIC2.71□□□□□ -1.98
SALL3Q9BXA9 SNORA72.7-201ENST00000516349 94 ntBASIC2.71□□□□□ -1.98
SALL3Q9BXA9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.71□□□□□ -1.98
SALL3Q9BXA9 AC079598.5-201ENST00000547460 117 ntBASIC2.71□□□□□ -1.98
SALL3Q9BXA9 SNORD11B-201ENST00000607707 90 ntBASIC2.71□□□□□ -1.98
SALL3Q9BXA9 AC005562.2-201ENST00000618264 111 ntBASIC2.71□□□□□ -1.98
SALL3Q9BXA9 AC068205.3-201ENST00000636385 468 ntBASIC2.71□□□□□ -1.98
SALL3Q9BXA9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.71□□□□□ -1.98
SALL3Q9BXA9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.71□□□□□ -1.98
SALL3Q9BXA9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SALL3Q9BXA9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.71□□□□□ -1.98
SALL3Q9BXA9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SALL3Q9BXA9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.71□□□□□ -1.98
SALL3Q9BXA9 RNU6-1272P-201ENST00000362776 107 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 RNU6-655P-201ENST00000362858 107 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 RNU6-461P-201ENST00000364195 107 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 Y_RNA.261-201ENST00000364631 102 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 RNU6-923P-201ENST00000364753 107 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 RNU6-818P-201ENST00000364837 108 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 Y_RNA.308-201ENST00000365043 101 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 Y_RNA.353-201ENST00000365440 108 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 Y_RNA.398-201ENST00000383952 99 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 RNU1-57P-201ENST00000384491 166 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 MIR186-201ENST00000384988 86 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 MIR549A-201ENST00000385268 96 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 Y_RNA.580-201ENST00000391004 95 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 AL133475.1-201ENST00000404414 305 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 U3.40-201ENST00000408706 208 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 RNU6-1135P-201ENST00000411083 103 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 AL445687.1-201ENST00000439946 251 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 AC009237.7-201ENST00000447357 229 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.7□□□□□ -1.98
SALL3Q9BXA9 RNU4-57P-201ENST00000515980 135 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 RNY3P16-201ENST00000516338 101 ntBASIC2.7□□□□□ -1.98
SALL3Q9BXA9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.7□□□□□ -1.98
SALL3Q9BXA9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.7□□□□□ -1.98
SALL3Q9BXA9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.7□□□□□ -1.98
SALL3Q9BXA9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.7□□□□□ -1.98
SALL3Q9BXA9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SALL3Q9BXA9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
SALL3Q9BXA9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SALL3Q9BXA9 Y_RNA.121-201ENST00000363309 113 ntBASIC2.69□□□□□ -1.98
SALL3Q9BXA9 RNU6-727P-201ENST00000363592 107 ntBASIC2.69□□□□□ -1.98
SALL3Q9BXA9 RNU6-312P-201ENST00000364629 107 ntBASIC2.69□□□□□ -1.98
SALL3Q9BXA9 RNU6-131P-201ENST00000391144 107 ntBASIC2.69□□□□□ -1.98
SALL3Q9BXA9 HMGN2P35-201ENST00000412164 270 ntBASIC2.69□□□□□ -1.98
SALL3Q9BXA9 AL135786.1-201ENST00000415892 214 ntBASIC2.69□□□□□ -1.98
SALL3Q9BXA9 AC004386.2-201ENST00000441858 148 ntBASIC2.69□□□□□ -1.98
SALL3Q9BXA9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.69□□□□□ -1.98
SALL3Q9BXA9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SALL3Q9BXA9 RNU6-1219P-201ENST00000516143 112 ntBASIC2.69□□□□□ -1.98
SALL3Q9BXA9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.69□□□□□ -1.98
SALL3Q9BXA9 SCARNA17.1-201ENST00000516211 143 ntBASIC2.69□□□□□ -1.98
SALL3Q9BXA9 SCARNA17.2-201ENST00000516334 143 ntBASIC2.69□□□□□ -1.98
SALL3Q9BXA9 RNA5SP200-201ENST00000516360 103 ntBASIC2.69□□□□□ -1.98
SALL3Q9BXA9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.69□□□□□ -1.98
SALL3Q9BXA9 AC112693.2-201ENST00000556538 232 ntBASIC2.69□□□□□ -1.98
SALL3Q9BXA9 AC015712.3-201ENST00000559380 164 ntBASIC2.69□□□□□ -1.98
SALL3Q9BXA9 AC009127.3-201ENST00000570531 403 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms