Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ICE2P2-201ENST00000483823 2787 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 SNORA27.1-201ENST00000362604 124 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 RNU6-961P-201ENST00000363893 105 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 Y_RNA.243-201ENST00000364481 109 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 RNU6-117P-201ENST00000365415 107 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 Y_RNA.387-201ENST00000383918 102 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 RNY3P14-201ENST00000384309 102 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 SNORD12B-201ENST00000410433 91 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 MTND4P28-201ENST00000426217 387 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 AL121890.1-201ENST00000435457 205 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 AC015922.2-201ENST00000435593 184 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 MIR2053-201ENST00000459295 91 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 AC010469.2-201ENST00000496412 480 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 AC105758.1-201ENST00000506038 399 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 AC097462.1-201ENST00000514125 324 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 RNA5SP445-201ENST00000515889 115 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 RNU1-92P-201ENST00000517017 135 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 RNU6-902P-201ENST00000517212 91 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 AC023157.2-201ENST00000540596 141 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 AL161670.1-201ENST00000554348 137 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 PRR13P7-201ENST00000605538 430 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 AC025253.1-201ENST00000613623 543 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 AC084781.2-201ENST00000615568 161 ntBASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
HDHD3Q9BSH5 AC073544.1-201ENST00000600110 1595 ntBASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 RNA5SP323-201ENST00000391094 133 ntBASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 RNY4P36-201ENST00000391116 96 ntBASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 RNU6-1186P-201ENST00000410429 97 ntBASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 MTCO3P19-201ENST00000415864 321 ntBASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 AF228730.4-201ENST00000421457 183 ntBASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 snoU13.26-201ENST00000459452 105 ntBASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 RNU6-107P-201ENST00000516643 102 ntBASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 RNU2-12P-201ENST00000517216 168 ntBASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 MIR4709-201ENST00000577272 72 ntBASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 MIR4801-201ENST00000582704 82 ntBASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 MIR3674-201ENST00000636576 68 ntBASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 ZNF209P-201ENST00000593450 2304 ntBASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 AC018630.2-201ENST00000534866 2403 ntBASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HDHD3Q9BSH5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 RNU6-1266P-201ENST00000362794 105 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 RNU6-457P-201ENST00000363999 107 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 RNY3P11-201ENST00000364153 102 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 RNU6-1297P-201ENST00000384415 104 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 RNY3P4-201ENST00000384428 101 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 Y_RNA.496-201ENST00000384444 101 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 Y_RNA.498-201ENST00000384460 102 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 MIR150-201ENST00000385048 84 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 RNU6-440P-201ENST00000390882 105 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 SNORA69.1-201ENST00000390904 137 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 SNORA67.5-201ENST00000391036 107 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 MRPL42P3-201ENST00000401492 326 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 RNU5A-5P-201ENST00000411054 116 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 AC114482.1-201ENST00000418010 247 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 RPL30P13-201ENST00000418873 348 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 AL137792.2-201ENST00000443484 235 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 Y_RNA.653-201ENST00000459091 95 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 RNU6-625P-201ENST00000459412 107 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 MIR3684-201ENST00000579779 74 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 MIR3945-201ENST00000581853 98 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 MIR1302-1-201ENST00000637932 143 ntBASIC1.04□□□□□ -2.24
HDHD3Q9BSH5 RNU6-1123P-201ENST00000362347 106 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 RNU6-1115P-201ENST00000362490 106 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 SNORD114-7-201ENST00000362520 77 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 Y_RNA.124-201ENST00000363339 93 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 SNORD115-30-201ENST00000364117 82 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 Y_RNA.263-201ENST00000364659 114 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 RNU6-1040P-201ENST00000383974 107 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 Y_RNA.463-201ENST00000384271 102 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 SNORA40.6-201ENST00000391153 128 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 RNU6-1199P-201ENST00000411249 104 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 COX6CP10-201ENST00000416832 224 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 AC018865.2-201ENST00000423631 129 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 AC245047.3-201ENST00000429428 127 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 RNA5SP20-201ENST00000515976 84 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 RNU6-507P-201ENST00000516045 100 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 RNU6-966P-201ENST00000516479 104 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 RNU6-911P-201ENST00000516523 104 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 RNU6-1012P-201ENST00000516606 109 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 RNU6-548P-201ENST00000517083 115 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 AC027419.1-201ENST00000522976 328 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 AL355375.2-201ENST00000574825 175 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 AC073413.2-201ENST00000604332 360 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 RBM11P1-201ENST00000604951 799 ntBASIC1.03□□□□□ -2.24
HDHD3Q9BSH5 MIR6079-201ENST00000635807 62 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms