Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RNU6-1272P-201ENST00000362776 107 ntBASIC2.49□□□□□ -2.01
SMOQ99835 Y_RNA.83-201ENST00000363005 113 ntBASIC2.49□□□□□ -2.01
SMOQ99835 Y_RNA.172-201ENST00000363765 102 ntBASIC2.49□□□□□ -2.01
SMOQ99835 RNU6-801P-201ENST00000364087 105 ntBASIC2.49□□□□□ -2.01
SMOQ99835 SNORD114-30-201ENST00000364448 72 ntBASIC2.49□□□□□ -2.01
SMOQ99835 RNU6-211P-201ENST00000384047 107 ntBASIC2.49□□□□□ -2.01
SMOQ99835 RNU6-1248P-201ENST00000391096 64 ntBASIC2.49□□□□□ -2.01
SMOQ99835 RNA5SP508-201ENST00000411327 119 ntBASIC2.49□□□□□ -2.01
SMOQ99835 AC024067.1-201ENST00000426199 223 ntBASIC2.49□□□□□ -2.01
SMOQ99835 BTF3P11-201ENST00000426582 477 ntBASIC2.49□□□□□ -2.01
SMOQ99835 PRELID3BP1-201ENST00000457142 540 ntBASIC2.49□□□□□ -2.01
SMOQ99835 Y_RNA.637-201ENST00000459424 114 ntBASIC2.49□□□□□ -2.01
SMOQ99835 TRBV12-1-201ENST00000479785 344 ntBASIC2.49□□□□□ -2.01
SMOQ99835 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.49□□□□□ -2.01
SMOQ99835 YWHAEP4-201ENST00000505390 198 ntBASIC2.49□□□□□ -2.01
SMOQ99835 AC027419.1-201ENST00000522976 328 ntBASIC2.49□□□□□ -2.01
SMOQ99835 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.49□□□□□ -2.01
SMOQ99835 Z82195.2-201ENST00000612348 18351 ntBASIC2.49□□□□□ -2.01
SMOQ99835 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.49□□□□□ -2.01
SMOQ99835 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.49□□□□□ -2.01
SMOQ99835 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SMOQ99835 MIR411-201ENST00000362239 96 ntBASIC2.48□□□□□ -2.01
SMOQ99835 Y_RNA.785-201ENST00000384290 109 ntBASIC2.48□□□□□ -2.01
SMOQ99835 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.48□□□□□ -2.01
SMOQ99835 AL357134.1-201ENST00000445848 426 ntBASIC2.48□□□□□ -2.01
SMOQ99835 RPL23AP7-203ENST00000449021 469 ntBASIC2.48□□□□□ -2.01
SMOQ99835 U8.19-201ENST00000459095 133 ntBASIC2.48□□□□□ -2.01
SMOQ99835 RNU6-237P-201ENST00000515985 71 ntBASIC2.48□□□□□ -2.01
SMOQ99835 RNU2-34P-201ENST00000516534 121 ntBASIC2.48□□□□□ -2.01
SMOQ99835 SNORA81.3-201ENST00000517283 198 ntBASIC2.48□□□□□ -2.01
SMOQ99835 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.48□□□□□ -2.01
SMOQ99835 AC091544.4-201ENST00000555268 342 ntBASIC2.48□□□□□ -2.01
SMOQ99835 MIR3684-201ENST00000579779 74 ntBASIC2.48□□□□□ -2.01
SMOQ99835 SNORD53-201ENST00000579969 78 ntBASIC2.48□□□□□ -2.01
SMOQ99835 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.48□□□□□ -2.01
SMOQ99835 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.48□□□□□ -2.01
SMOQ99835 AC073349.3-201ENST00000617616 186 ntBASIC2.48□□□□□ -2.01
SMOQ99835 AL590808.1-201ENST00000618696 141 ntBASIC2.48□□□□□ -2.01
SMOQ99835 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.48□□□□□ -2.01
SMOQ99835 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SMOQ99835 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SMOQ99835 SNORA27.1-201ENST00000362604 124 ntBASIC2.47□□□□□ -2.01
SMOQ99835 RNU6-1048P-201ENST00000364054 107 ntBASIC2.47□□□□□ -2.01
SMOQ99835 RNU6-763P-201ENST00000390865 106 ntBASIC2.47□□□□□ -2.01
SMOQ99835 SNORA26.5-201ENST00000391215 123 ntBASIC2.47□□□□□ -2.01
SMOQ99835 MIR873-201ENST00000401120 77 ntBASIC2.47□□□□□ -2.01
SMOQ99835 RNU6-855P-201ENST00000410395 104 ntBASIC2.47□□□□□ -2.01
SMOQ99835 RNU6-710P-201ENST00000410424 105 ntBASIC2.47□□□□□ -2.01
SMOQ99835 RNU4-53P-201ENST00000410828 140 ntBASIC2.47□□□□□ -2.01
SMOQ99835 AC009238.1-201ENST00000442165 424 ntBASIC2.47□□□□□ -2.01
SMOQ99835 AC009237.6-201ENST00000446969 424 ntBASIC2.47□□□□□ -2.01
SMOQ99835 SUMO1P2-201ENST00000452524 304 ntBASIC2.47□□□□□ -2.01
SMOQ99835 AC010598.1-201ENST00000510378 103 ntBASIC2.47□□□□□ -2.01
SMOQ99835 RNA5SP281-201ENST00000516504 135 ntBASIC2.47□□□□□ -2.01
SMOQ99835 AC136628.3-201ENST00000521868 290 ntBASIC2.47□□□□□ -2.01
SMOQ99835 AC009127.3-201ENST00000570531 403 ntBASIC2.47□□□□□ -2.01
SMOQ99835 U4atac.1-201ENST00000618345 95 ntBASIC2.47□□□□□ -2.01
SMOQ99835 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SMOQ99835 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.47□□□□□ -2.01
SMOQ99835 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.01
SMOQ99835 AC009487.4-201ENST00000624969 3585 ntBASIC2.46□□□□□ -2.02
SMOQ99835 Y_RNA.310-201ENST00000365063 113 ntBASIC2.46□□□□□ -2.02
SMOQ99835 Y_RNA.368-201ENST00000365547 113 ntBASIC2.46□□□□□ -2.02
SMOQ99835 MIR1262-201ENST00000408276 93 ntBASIC2.46□□□□□ -2.02
SMOQ99835 AC018634.1-201ENST00000437554 401 ntBASIC2.46□□□□□ -2.02
SMOQ99835 SNORA4.4-201ENST00000515921 135 ntBASIC2.46□□□□□ -2.02
SMOQ99835 SNORA70.12-201ENST00000516084 153 ntBASIC2.46□□□□□ -2.02
SMOQ99835 RNY3P16-201ENST00000516338 101 ntBASIC2.46□□□□□ -2.02
SMOQ99835 RNA5SP24-201ENST00000516478 95 ntBASIC2.46□□□□□ -2.02
SMOQ99835 Y_RNA.700-201ENST00000516806 100 ntBASIC2.46□□□□□ -2.02
SMOQ99835 RNU6-856P-201ENST00000516959 98 ntBASIC2.46□□□□□ -2.02
SMOQ99835 AC024405.2-202ENST00000532731 184 ntBASIC2.46□□□□□ -2.02
SMOQ99835 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.46□□□□□ -2.02
SMOQ99835 NDUFA5P6-201ENST00000542110 379 ntBASIC2.46□□□□□ -2.02
SMOQ99835 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.46□□□□□ -2.02
SMOQ99835 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.46□□□□□ -2.02
SMOQ99835 AC134026.1-201ENST00000623249 2239 ntBASIC2.46□□□□□ -2.02
SMOQ99835 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.46□□□□□ -2.02
SMOQ99835 AC068700.1-201ENST00000565862 3754 ntBASIC2.46□□□□□ -2.02
SMOQ99835 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SMOQ99835 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
SMOQ99835 SNORD114-7-201ENST00000362520 77 ntBASIC2.45□□□□□ -2.02
SMOQ99835 RNA5SP393-201ENST00000363423 117 ntBASIC2.45□□□□□ -2.02
SMOQ99835 RNU6-1240P-201ENST00000365155 104 ntBASIC2.45□□□□□ -2.02
SMOQ99835 RNU6-407P-201ENST00000365280 104 ntBASIC2.45□□□□□ -2.02
SMOQ99835 Y_RNA.341-201ENST00000365341 102 ntBASIC2.45□□□□□ -2.02
SMOQ99835 RNU6-1072P-201ENST00000384703 107 ntBASIC2.45□□□□□ -2.02
SMOQ99835 RNU6-443P-201ENST00000384780 107 ntBASIC2.45□□□□□ -2.02
SMOQ99835 AC008134.1-201ENST00000420943 193 ntBASIC2.45□□□□□ -2.02
SMOQ99835 COX6CP14-201ENST00000469580 174 ntBASIC2.45□□□□□ -2.02
SMOQ99835 SNORA31.15-201ENST00000516771 132 ntBASIC2.45□□□□□ -2.02
SMOQ99835 CBX3P4-201ENST00000538909 354 ntBASIC2.45□□□□□ -2.02
SMOQ99835 MIR5007-201ENST00000583098 95 ntBASIC2.45□□□□□ -2.02
SMOQ99835 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMOQ99835 Y_RNA.29-201ENST00000362570 113 ntBASIC2.44□□□□□ -2.02
SMOQ99835 RNU1-51P-201ENST00000365345 176 ntBASIC2.44□□□□□ -2.02
SMOQ99835 DEFA7P-201ENST00000382676 285 ntBASIC2.44□□□□□ -2.02
SMOQ99835 SNORA72.4-201ENST00000384174 132 ntBASIC2.44□□□□□ -2.02
SMOQ99835 Y_RNA.456-201ENST00000384232 111 ntBASIC2.44□□□□□ -2.02
SMOQ99835 SNORD116-13-201ENST00000384408 92 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms