Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.11□□□□□ -2.07
NPAS1Q99742 MIR4438-201ENST00000585271 93 ntBASIC2.11□□□□□ -2.07
NPAS1Q99742 AC078899.2-201ENST00000595282 212 ntBASIC2.11□□□□□ -2.07
NPAS1Q99742 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.11□□□□□ -2.07
NPAS1Q99742 AC012640.5-201ENST00000623897 319 ntBASIC2.11□□□□□ -2.07
NPAS1Q99742 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NPAS1Q99742 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NPAS1Q99742 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.11□□□□□ -2.07
NPAS1Q99742 Y_RNA.133-201ENST00000363428 110 ntBASIC2.1□□□□□ -2.07
NPAS1Q99742 SNORD115-30-201ENST00000364117 82 ntBASIC2.1□□□□□ -2.07
NPAS1Q99742 Y_RNA.376-201ENST00000365638 108 ntBASIC2.1□□□□□ -2.07
NPAS1Q99742 RNU6-301P-201ENST00000384277 107 ntBASIC2.1□□□□□ -2.07
NPAS1Q99742 RNU6-196P-201ENST00000384315 107 ntBASIC2.1□□□□□ -2.07
NPAS1Q99742 MIR873-201ENST00000401120 77 ntBASIC2.1□□□□□ -2.07
NPAS1Q99742 RNU6-1199P-201ENST00000411249 104 ntBASIC2.1□□□□□ -2.07
NPAS1Q99742 HMGN1P10-201ENST00000474557 553 ntBASIC2.1□□□□□ -2.07
NPAS1Q99742 AC090255.1-201ENST00000495779 349 ntBASIC2.1□□□□□ -2.07
NPAS1Q99742 AC025465.3-201ENST00000510570 311 ntBASIC2.1□□□□□ -2.07
NPAS1Q99742 RNU6-496P-201ENST00000516145 99 ntBASIC2.1□□□□□ -2.07
NPAS1Q99742 RNU6-436P-201ENST00000516171 114 ntBASIC2.1□□□□□ -2.07
NPAS1Q99742 RNU6-966P-201ENST00000516479 104 ntBASIC2.1□□□□□ -2.07
NPAS1Q99742 RNU1-142P-201ENST00000516682 145 ntBASIC2.1□□□□□ -2.07
NPAS1Q99742 SCARNA24.2-201ENST00000516968 130 ntBASIC2.1□□□□□ -2.07
NPAS1Q99742 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.1□□□□□ -2.07
NPAS1Q99742 MIR5094-201ENST00000578766 85 ntBASIC2.1□□□□□ -2.07
NPAS1Q99742 MIR8062-201ENST00000621515 85 ntBASIC2.1□□□□□ -2.07
NPAS1Q99742 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
NPAS1Q99742 AL596028.1-201ENST00000326971 197 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 SNORA27.1-201ENST00000362604 124 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 snoU2_19.2-201ENST00000363024 80 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 RNU6-290P-201ENST00000365212 101 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 RNU4-52P-201ENST00000384209 138 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 Y_RNA.581-201ENST00000391017 97 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 RNA5SP467-201ENST00000391274 118 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 AC010154.1-201ENST00000425857 269 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 MTCYBP9-201ENST00000431021 303 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 RNA5SP57-201ENST00000459463 123 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 AC008413.1-201ENST00000511864 177 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.09□□□□□ -2.07
NPAS1Q99742 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 AL161670.1-201ENST00000554348 137 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 RPL21P9-201ENST00000556149 474 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 MIR3145-201ENST00000580727 82 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 DEFB117-201ENST00000602356 141 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 U1.36-201ENST00000620684 176 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 AC006435.5-201ENST00000624486 112 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 MIR338-201ENST00000636369 67 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 AP000553.5-201ENST00000641933 54 ntBASIC2.09□□□□□ -2.07
NPAS1Q99742 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.09□□□□□ -2.08
NPAS1Q99742 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.08□□□□□ -2.08
NPAS1Q99742 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NPAS1Q99742 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NPAS1Q99742 Y_RNA.84-201ENST00000363011 104 ntBASIC2.08□□□□□ -2.08
NPAS1Q99742 Y_RNA.287-201ENST00000364853 94 ntBASIC2.08□□□□□ -2.08
NPAS1Q99742 RNU6-505P-201ENST00000384427 107 ntBASIC2.08□□□□□ -2.08
NPAS1Q99742 SNORA8-201ENST00000384574 139 ntBASIC2.08□□□□□ -2.08
NPAS1Q99742 RNU6-136P-201ENST00000384663 107 ntBASIC2.08□□□□□ -2.08
NPAS1Q99742 MIR1283-2-201ENST00000408621 87 ntBASIC2.08□□□□□ -2.08
NPAS1Q99742 MRPS10P1-201ENST00000448483 130 ntBASIC2.08□□□□□ -2.08
NPAS1Q99742 HSPE1P25-201ENST00000455484 251 ntBASIC2.08□□□□□ -2.08
NPAS1Q99742 DEFB108E-201ENST00000524692 240 ntBASIC2.08□□□□□ -2.08
NPAS1Q99742 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.08□□□□□ -2.08
NPAS1Q99742 AL512605.2-201ENST00000592972 256 ntBASIC2.08□□□□□ -2.08
NPAS1Q99742 AL359075.3-201ENST00000613288 217 ntBASIC2.08□□□□□ -2.08
NPAS1Q99742 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.08□□□□□ -2.08
NPAS1Q99742 CENPCP1-201ENST00000533085 2578 ntBASIC2.08□□□□□ -2.08
NPAS1Q99742 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
NPAS1Q99742 SNORA25.1-201ENST00000362326 128 ntBASIC2.07□□□□□ -2.08
NPAS1Q99742 RNA5SP276-201ENST00000362580 94 ntBASIC2.07□□□□□ -2.08
NPAS1Q99742 Y_RNA.124-201ENST00000363339 93 ntBASIC2.07□□□□□ -2.08
NPAS1Q99742 Y_RNA.541-201ENST00000384640 113 ntBASIC2.07□□□□□ -2.08
NPAS1Q99742 RNU6-376P-201ENST00000384731 106 ntBASIC2.07□□□□□ -2.08
NPAS1Q99742 RNU6-1248P-201ENST00000391096 64 ntBASIC2.07□□□□□ -2.08
NPAS1Q99742 AL355497.1-201ENST00000406262 551 ntBASIC2.07□□□□□ -2.08
NPAS1Q99742 RNU6-855P-201ENST00000410395 104 ntBASIC2.07□□□□□ -2.08
NPAS1Q99742 RNU6-710P-201ENST00000410424 105 ntBASIC2.07□□□□□ -2.08
NPAS1Q99742 RNU4-53P-201ENST00000410828 140 ntBASIC2.07□□□□□ -2.08
NPAS1Q99742 CST2P1-201ENST00000425770 87 ntBASIC2.07□□□□□ -2.08
NPAS1Q99742 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.07□□□□□ -2.08
NPAS1Q99742 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.07□□□□□ -2.08
NPAS1Q99742 RNU2-31P-201ENST00000516954 155 ntBASIC2.07□□□□□ -2.08
NPAS1Q99742 RNU7-172P-201ENST00000517125 64 ntBASIC2.07□□□□□ -2.08
NPAS1Q99742 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.07□□□□□ -2.08
NPAS1Q99742 SNORD53-201ENST00000579969 78 ntBASIC2.07□□□□□ -2.08
NPAS1Q99742 MIR5007-201ENST00000583098 95 ntBASIC2.07□□□□□ -2.08
NPAS1Q99742 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NPAS1Q99742 AL391987.6-201ENST00000305671 199 ntBASIC2.06□□□□□ -2.08
NPAS1Q99742 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NPAS1Q99742 Y_RNA.16-201ENST00000362421 102 ntBASIC2.06□□□□□ -2.08
NPAS1Q99742 SNORD81.1-201ENST00000363064 77 ntBASIC2.06□□□□□ -2.08
NPAS1Q99742 Y_RNA.144-201ENST00000363521 113 ntBASIC2.06□□□□□ -2.08
NPAS1Q99742 RNA5SP126-201ENST00000365092 109 ntBASIC2.06□□□□□ -2.08
NPAS1Q99742 MIR515-2-201ENST00000384883 83 ntBASIC2.06□□□□□ -2.08
NPAS1Q99742 MIR515-1-201ENST00000384884 83 ntBASIC2.06□□□□□ -2.08
NPAS1Q99742 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NPAS1Q99742 RNU6-1203P-201ENST00000410703 110 ntBASIC2.06□□□□□ -2.08
NPAS1Q99742 RNU2-7P-201ENST00000410794 178 ntBASIC2.06□□□□□ -2.08
NPAS1Q99742 RNA5SP501-201ENST00000410990 112 ntBASIC2.06□□□□□ -2.08
NPAS1Q99742 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.06□□□□□ -2.08
NPAS1Q99742 RNU2-19P-201ENST00000517288 84 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms