Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AL118556.2-201ENST00000614375 824 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 MIR6854-201ENST00000614935 69 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 RNU6-655P-201ENST00000362858 107 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 SNORD32B-201ENST00000364460 84 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 RNU6-487P-201ENST00000365430 104 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 MIR660-201ENST00000385235 97 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 FCF1P10-201ENST00000407590 479 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 RNU2-23P-201ENST00000410545 195 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 AC243428.1-201ENST00000421099 264 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 AC006366.1-201ENST00000422002 759 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 ELOCP14-201ENST00000428070 331 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 AL512286.1-201ENST00000439244 400 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 ELOCP7-201ENST00000439968 331 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 RNU2-53P-201ENST00000516257 147 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 RNU6-448P-201ENST00000517052 107 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 MIR548AM-201ENST00000584298 74 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.87□□□□□ -2.55
COL12A1Q99715 RNU4-80P-201ENST00000363200 141 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 PPP1R11P2-201ENST00000423543 382 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 SNAP23P1-201ENST00000433229 246 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.87□□□□□ -2.55
COL12A1Q99715 AP000870.1-201ENST00000472927 406 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 TMEM251P1-201ENST00000503717 318 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 RNU6-840P-201ENST00000517275 65 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 AC138749.4-201ENST00000563970 127 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 MIR4771-2-201ENST00000577758 74 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 MIR4771-1-201ENST00000582617 74 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 MIR3192-201ENST00000584920 77 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 RNU6-534P-201ENST00000364877 106 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 RPS24P1-201ENST00000438550 371 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.88□□□□□ -2.55
COL12A1Q99715 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.88□□□□□ -2.55
COL12A1Q99715 MIR5693-201ENST00000577722 73 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 AC008752.3-201ENST00000588113 712 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 BNIP3P24-201ENST00000593398 557 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.88□□□□□ -2.55
COL12A1Q99715 RNU6-28P-201ENST00000362378 107 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 RNU6-726P-201ENST00000364680 107 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 SNORD41-201ENST00000386967 70 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 GPM6BP2-201ENST00000432046 144 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 GPM6BP1-201ENST00000446387 144 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.88□□□□□ -2.55
COL12A1Q99715 RPL23AP75-201ENST00000491601 451 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 C1DP5-201ENST00000525775 383 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 Y_RNA.830-201ENST00000628531 96 ntBASIC-0.88□□□□□ -2.55
COL12A1Q99715 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.89□□□□□ -2.55
COL12A1Q99715 RNU6-393P-201ENST00000384475 107 ntBASIC-0.89□□□□□ -2.55
COL12A1Q99715 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.89□□□□□ -2.55
COL12A1Q99715 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.89□□□□□ -2.55
COL12A1Q99715 MRPS36P5-201ENST00000551909 298 ntBASIC-0.89□□□□□ -2.55
COL12A1Q99715 MIR4782-201ENST00000577987 79 ntBASIC-0.89□□□□□ -2.55
COL12A1Q99715 RNU6-441P-201ENST00000384545 106 ntBASIC-0.89□□□□□ -2.55
COL12A1Q99715 MTATP6P27-201ENST00000416987 621 ntBASIC-0.89□□□□□ -2.55
COL12A1Q99715 AC087894.1-201ENST00000538359 518 ntBASIC-0.89□□□□□ -2.55
COL12A1Q99715 MIR4748-201ENST00000578076 82 ntBASIC-0.89□□□□□ -2.55
COL12A1Q99715 AC022022.2-201ENST00000602989 360 ntBASIC-0.89□□□□□ -2.55
COL12A1Q99715 AC091965.4-201ENST00000607691 587 ntBASIC-0.89□□□□□ -2.55
COL12A1Q99715 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.89□□□□□ -2.55
COL12A1Q99715 RNU6-921P-201ENST00000384361 107 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 BTF3L4P3-201ENST00000418879 476 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 AL451054.2-201ENST00000420896 202 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 RNU7-55P-201ENST00000459426 62 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 RNU6-714P-201ENST00000516963 103 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.9□□□□□ -2.55
COL12A1Q99715 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.9□□□□□ -2.55
COL12A1Q99715 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.9□□□□□ -2.55
COL12A1Q99715 AL355598.1-201ENST00000604169 202 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.9□□□□□ -2.55
COL12A1Q99715 Y_RNA.59-201ENST00000362828 102 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 RNU6-164P-201ENST00000364604 103 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.9□□□□□ -2.55
COL12A1Q99715 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.9□□□□□ -2.55
COL12A1Q99715 RPS29P24-201ENST00000486345 171 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 PRDX4P1-201ENST00000507189 574 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 AL596327.1-201ENST00000603629 213 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.9□□□□□ -2.55
COL12A1Q99715 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 RNY4P10-201ENST00000365571 96 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 RNU6-975P-201ENST00000384296 105 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 MIR487B-201ENST00000385021 84 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 RNU6-754P-201ENST00000391166 107 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 MTATP6P20-201ENST00000414147 562 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 RNU7-94P-201ENST00000459576 63 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 MED28P2-201ENST00000475771 317 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 RNU6-202P-201ENST00000515998 96 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 RNU6-469P-201ENST00000516253 101 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 AC018448.1-201ENST00000552843 316 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms